Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04219 ATGGGTGATGAAGAGTTAGACAGAGAAACCAACCTGGCCGGAGTACCTACCGGAGCTTCCCGTCTCCGGCGGGCTGTGGAACTCATTTCTTCATTACTATCCCTTTCTCTGTCTATCAGAGTCTTCGCCGGAAAATGGCAACTGATTCGGAACAAGCTTGAGGAGCTTCTTTCGGGTTTAATCGCCGCCGAGAATTGCGATTCCGGTGAGAACCCGTCGTTATCGAGGTTAGTGACTTCGATAGTTGCGACTGTAAATGAGTGTCACGATCTAGGTCAGCGTTGCGTCGATGTTGCGTATAGTGGGAAGTTGTTGATGCAGAGTGATTTGGACGTGGCGTTTGCGAAGCTTGATGGGGTTGTGAGGAGGCTTTCGGAGATATATAAAACGGGGATTTTGACGAATGGGTTTGCGCTTGTGGTTTCAAAACCGAGTCTTGGTGCTTCTAAGGAGGATATGAGGTTTTATGTGAGAGATGTTTTGACGAGGATGAAGATTGGTGATATGGGTATGAAGAAAATGGCTTTGAGGAATCTTCTTGAGGTTGTGGTTGAGGATGAGAAGTATGTGAAGGTGATTGTTGTGGATGTGAGTGATGTTGTTCATGTGCTTGTGGGGTTTTTGGGTTCTGGTGAGGTGGAGATTCAAGAGGAGAGTGCTAAGGTTGTTTCTGTGGTTGTGGGTTTTGATTCGTATAAAGGGGTTTTGGTTAGTGCGGGTGTGATTGCGCCGTTGGTTCGGGTTTTGGATTGTGGGAGTGAGTTGGGGAAAGTTGCGGCCGCAAGGTGTTTGATGAAATTGACGGAGAATTCGGATAATGCTTGGGCTGTTTCTGCTCATGGCGGTGTTACTGCGTTGTTGAATATTTGTGGGAATGATGATTGTAAAGGGGATTTGGTTGCTCCTGCTTGTGGGGTGTTGAGAAATCTTGTTGGTGTTGAGGAGGTTAAGAGGTTTATGGTAGAAGAGGATGCTGTGGCGACGTTTATAAGGCTTGTGAAATCGAAGGAGGAAGCGATTCAGGTGAATTCGATAGGATTCATTCAGAATATTGCCTGTGGAGATGAGTTGATTAGGGAAAAGGTGATTAGAGACGGCGGAATCCGAGCTTTGTTACGTGTTTTGGATCCGAAATGGTCGTATTCTTTGAAAACAAAGGTAATAGCAATGAGGGCTATTGAAAGTTTGTGTTTTACATCATCTAGCTCTGTAAGTATTTTAATGAGTTACGGTTTCGTGGATCAATTACTATATTATGTTCGAAACGGTGAAGTTTCAATTCAAGAGTTGGCATTGAAAGTGGCGTTTAGATTATGCGGAACATCCGAAGAGGCTAAGAAAGCAATGGGCGACGCCGGTTTCATGGCAGAGTTTGTTAAGTTTCTGAACGCAAAATCATACGAAGTTCGCGAAATGGCAGCTGAAGCACTCTCTGGCATGGTCATGGTACCTCGAAATCGGAAGCGATTCGTGCAGGACGACCATAACATAGCCCTGCTTCTGCAATTGCTCGATCCAGAAGAGGGAAATTCAGGTAACAAGAAGTTCTTAATCTCAATCTTAATGTCATTGACAAGTTGCAATAGTGGGAGAAAAAAGATTGTTACTTCTGGTTATGCCAAAAACATAGACAGACTAGCAGAAGTCGAAGTTTCTTCCGATGCTAAAAAACTTGTCAAGAAACTATCCACAAACCGGTTCCGCAGTATGTTGAACGGAATCTGGCACTCATGA 1734 0.4464 MGDEELDRETNLAGVPTGASRLRRAVELISSLLSLSLSIRVFAGKWQLIRNKLEELLSGLIAAENCDSGENPSLSRLVTSIVATVNECHDLGQRCVDVAYSGKLLMQSDLDVAFAKLDGVVRRLSEIYKTGILTNGFALVVSKPSLGASKEDMRFYVRDVLTRMKIGDMGMKKMALRNLLEVVVEDEKYVKVIVVDVSDVVHVLVGFLGSGEVEIQEESAKVVSVVVGFDSYKGVLVSAGVIAPLVRVLDCGSELGKVAAARCLMKLTENSDNAWAVSAHGGVTALLNICGNDDCKGDLVAPACGVLRNLVGVEEVKRFMVEEDAVATFIRLVKSKEEAIQVNSIGFIQNIACGDELIREKVIRDGGIRALLRVLDPKWSYSLKTKVIAMRAIESLCFTSSSSVSILMSYGFVDQLLYYVRNGEVSIQELALKVAFRLCGTSEEAKKAMGDAGFMAEFVKFLNAKSYEVREMAAEALSGMVMVPRNRKRFVQDDHNIALLLQLLDPEEGNSGNKKFLISILMSLTSCNSGRKKIVTSGYAKNIDRLAEVEVSSDAKKLVKKLSTNRFRSMLNGIWHS 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04219 577 Gene3D - 298 561 IPR011989 -
Vivi5g04219 577 Gene3D - 168 297 IPR011989 -
Vivi5g04219 577 SUPERFAMILY ARM repeat 147 527 IPR016024 -
Vivi5g04219 577 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 281 325 IPR000225 GO:0005515
Vivi5g04219 577 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 8 576 - -
Vivi5g04219 577 SMART arm_5 355 398 IPR000225 GO:0005515
Vivi5g04219 577 SMART arm_5 186 228 IPR000225 GO:0005515
Vivi5g04219 577 SMART arm_5 229 269 IPR000225 GO:0005515
Vivi5g04219 577 SMART arm_5 313 353 IPR000225 GO:0005515
Vivi5g04219 577 SMART arm_5 442 482 IPR000225 GO:0005515
Vivi5g04219 577 SMART arm_5 270 312 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04219 204 434 U-box Gene Family AT3G54790 24.138 4.11e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04219 - - psat:127100726 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04219 5 139133569 139136021 Vivi5g04219 5 139133569 139136021 PCT