Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04180 ATGTTCACCTTTCTACAAACTTCTCTTTCACATGCAAACTTCTATTCACCATTCTCTATGTTTTTCTTCACTATCTTTTCACTCTTACTCTCTTTTTTCTTCATAATCAAATATTGGTATTTTTCCAACAATTCTTCTGCCACCACAAAAAACTCACCACCATCACCTCCAAGATTTCCACTACTCGGTAATCTTCATCAACTTGGCTTATTCCCTCACCGTACACTCCAAACATTATCTCACAAATATGGCCCTTTAATGCTTCTTTATTTTGGCAAGGTTCCAGTACTTGTGGTTTCTTCTGCTGATGCAGCAAGAAAAGTAATGAAAACTCACGATTTGGTTTTCTGTGATAGGCCACAAATTAAAATCTTTGATATCCTTTTATACGGTTCCAAAGATGTGGCAAGCTGTGCATATGGTGAGTATTGGAGACAAGTAAGGAGTCTCTGTGTGTTACACGTTCTGAGTAATAAAAGGGTTCAATCTTATCATCGTGTTAGAGAGGAAGAAACTTCAAGAATGATGGAACATATTAAGAAACATTCTTCTTCTTCATCCTCGCTGTTGAACTTATCTGAGTTGTGTTCTATGGTTACTAGTGATATAGTATGTAGGGTGGCTCTGGGAAAGAGATACCGTGAAGGAAGAGTGAAGAAATTTCAGCAAGTGTTGGTGGAGTTTATGGAATTATTGGGTACTGTATGTATAGGAGACTACATACCTTGGCTTGATTGGTTGGGAAAAGTTAATGGATTTTATAGAAAAGCAGAAAGAGTAGCCAAACATTTGGATGAGTTTATAGAAGAAGTGATTGAGGATCACATTCGTCGTAGATCTGATGAAGATGTTGGTGTTGATGATAATGATTTTGTGGATGTTTTGCTTTCAGTACAAAACACTAACGCTATTGGCTTCCCAGTTGATAGAACTACAATAAAAGCTTTGACACTTGACATGTTTGCTGGAGGTACTGACACTACTTCCACAGTACTAGATTGGACAATGACAGAACTGTTAAGACACAAAAGTGTGATGCATAAATTGCAAGATGAGGTGAGAACTATGGTTGGTAACAAAACTCATGTATCTGAAGAAGATTTGGTTAAGATGAACTACTTGAAGGCAGTGATCAAAGAAACACTTCGCCTGCATCTACCAGTTCCGTTATTACTCCCTCGGAGATGTATGGAACATATCAAACTAGATGGCTATGACATTGTGGCTGGAACACAGGTAATAATCAATGCCTGGGCTATTGCAAGAGACCCGTCAAGTTGGGATGAACCTCTAGAGTTTAAACCAGAAAGGTTTATGAATAGTTCAATAGATTTTAAAGGAATGGATTTTGAGCTTATTCCATTTGGAGCTGGAAGGAGGGGTTGTCCTGGAGTGTCATTTGGTATTGCTGTGATTGAATTGGTGCTAGCAAACCTTGTTTTCCAATTTGATTGGAAATTGCCTGATGGAGTAGAAGGGAAGGATTTGGACATGTCTGAAACTTTTGGCATTACCTGCCATAGAAAATACCCTCTCCTTGCAGTAGCTACCAAACATGAGAAAAAATGA 1569 0.3824 MFTFLQTSLSHANFYSPFSMFFFTIFSLLLSFFFIIKYWYFSNNSSATTKNSPPSPPRFPLLGNLHQLGLFPHRTLQTLSHKYGPLMLLYFGKVPVLVVSSADAARKVMKTHDLVFCDRPQIKIFDILLYGSKDVASCAYGEYWRQVRSLCVLHVLSNKRVQSYHRVREEETSRMMEHIKKHSSSSSSLLNLSELCSMVTSDIVCRVALGKRYREGRVKKFQQVLVEFMELLGTVCIGDYIPWLDWLGKVNGFYRKAERVAKHLDEFIEEVIEDHIRRRSDEDVGVDDNDFVDVLLSVQNTNAIGFPVDRTTIKALTLDMFAGGTDTTSTVLDWTMTELLRHKSVMHKLQDEVRTMVGNKTHVSEEDLVKMNYLKAVIKETLRLHLPVPLLLPRRCMEHIKLDGYDIVAGTQVIINAWAIARDPSSWDEPLEFKPERFMNSSIDFKGMDFELIPFGAGRRGCPGVSFGIAVIELVLANLVFQFDWKLPDGVEGKDLDMSETFGITCHRKYPLLAVATKHEKK 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04180 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Vivi5g04180 522 SUPERFAMILY Cytochrome P450 53 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04180 522 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04180 522 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04180 522 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04180 522 FunFam Cytochrome P450 83B1 40 515 - -
Vivi5g04180 522 CDD CYP71-like 82 512 - -
Vivi5g04180 522 PANTHER CYTOCHROME P450 71B11-RELATED 31 518 - -
Vivi5g04180 522 Pfam Cytochrome P450 53 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04180 522 Gene3D Cytochrome P450 40 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04180 522 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04180 522 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04180 522 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04180 522 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04180 522 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04180 522 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04180 522 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04180 522 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04180 522 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04180 Vivi-Chr5 138440952 138442774 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04180 25 517 Cytochrome P450 AT3G48270 49.798 7.53e-178 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04180 - - gmx:100819183 680.248