Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04179 ATGCTTCTTTATTTTGGCAAAGTTCCTGTACTTGTTGTTTCATCTTCTGATGCAGCAAGAAAAGTAATGAAAACACACGATTTGGTTTTCTGTGATAGGCCACAAAGTAAAATCTTTGATATCCTTGTATACGGTTCCAAAGATGTGGCAAGCTGTGCATATGGTGAGTATTGGAGACAAGTAAGGAGTCTCTGTGTGTTACATCTTCTGAGTAATAAAAGGGTTCAATCTTATGGCCGTGTTAGAGAGGAAGAAACTTCAAGAATGATGGAACATATTAAGAAACATTCTTCTTCTTCATCCTCGCCGTTGAACTTATCTGAGTTGTGTTCTATGGTTACTAGTGATATAGTATGTAGGGTGGCTCTTGGAAAGAGATACCGTGAAGGAAGAGGGAAGAAATTTCAGCAAGTGTTGGCGGAGTTTGTGGAATTATTGGGTACAGTATGTATAGGAGACTATATACCTTGGCTTGATTGGTGGGGAAAAGTTAATGGATTTTATAGAAAAGCAGAAAGAGTAGCCAAATATTTGGATGAGTTTATAGAAGAAGTGACTGAGGATCACATTGGTCATAGATCTGATGAAGATATTGGTGTTAATGATAATGATTTTGTGGATGTTTTGCTTTCAGTACAAAAGACTAACGCTATTGGCTTCCCAATTGATAGAACTACAATAAAAGCTTTGACACTGGACATGTTTGCTGGAGGTACTGACACTACTTCCACAGTACTAGATTGGACAATGACAGAACTGTTAAGACACCAAAGTGTGATGCATAAATTGCAAGATGAGGTGAGAACTGTGGTTGGTAACAAAACTCATGTATCTGAAGAAGATTTGGTTCACATGAACTACTTGAAAGCGGTGATCAAAGAAACTCTTCGCCTCCATTTACCAGTTCCGTTATTAGTCCCTCGGAGATGTATGGAAGATATCAAACTAGATGGCTATGACATTGCGGCTGGAACACAGGTAATAATCAATGGTTGGGCTATTGCAAGAGACCCGTCAAGTTGGGATGAACCTCTAGAGTTTAAACCAGAAAGGTTTATGAATAGTTCAATAGATTTTAAAGGAATGGATTTTGAACTTATACCATTTGGAGCTGGAAGGAGGGGTTGTCCTGGAGTGTCATTTGGTATTGCTGTGATTGAATTGGTGCTAGCAAACCTTGTTTTCCAATTTGATTGGAAATTGCCTGATGGAGTAGAAGGGAAGGATTTGGACATGTCTGAAACTTTTGGCATTACCTGCCATAGAAAATACCCTCTCCTTGCAGTAGCTACCAAACATGAGAAAAAATGA 1311 0.3875 MLLYFGKVPVLVVSSSDAARKVMKTHDLVFCDRPQSKIFDILVYGSKDVASCAYGEYWRQVRSLCVLHLLSNKRVQSYGRVREEETSRMMEHIKKHSSSSSSPLNLSELCSMVTSDIVCRVALGKRYREGRGKKFQQVLAEFVELLGTVCIGDYIPWLDWWGKVNGFYRKAERVAKYLDEFIEEVTEDHIGHRSDEDIGVNDNDFVDVLLSVQKTNAIGFPIDRTTIKALTLDMFAGGTDTTSTVLDWTMTELLRHQSVMHKLQDEVRTVVGNKTHVSEEDLVHMNYLKAVIKETLRLHLPVPLLVPRRCMEDIKLDGYDIAAGTQVIINGWAIARDPSSWDEPLEFKPERFMNSSIDFKGMDFELIPFGAGRRGCPGVSFGIAVIELVLANLVFQFDWKLPDGVEGKDLDMSETFGITCHRKYPLLAVATKHEKK 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04179 436 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04179 436 PRINTS E-class P450 group I signature 289 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04179 436 PRINTS E-class P450 group I signature 366 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04179 436 PRINTS E-class P450 group I signature 246 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04179 436 PRINTS E-class P450 group I signature 376 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04179 436 PRINTS E-class P450 group I signature 330 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04179 436 PRINTS E-class P450 group I signature 113 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04179 436 PRINTS E-class P450 group I signature 226 243 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04179 436 FunFam Cytochrome P450 83B1 1 429 - -
Vivi5g04179 436 PRINTS P450 superfamily signature 367 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04179 436 PRINTS P450 superfamily signature 237 254 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04179 436 PRINTS P450 superfamily signature 290 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04179 436 Pfam Cytochrome P450 3 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04179 436 SUPERFAMILY Cytochrome P450 2 431 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04179 436 CDD CYP71-like 1 426 - -
Vivi5g04179 436 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 369 378 IPR017972 GO:0005506|GO:0016705
Vivi5g04179 436 Gene3D Cytochrome P450 1 436 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04179 436 PANTHER CYTOCHROME P450 71B11-RELATED 1 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04179 Vivi-Chr5 138425982 138427753 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04179 1 431 Cytochrome P450 AT3G48270 50.231 2.28e-158 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04179 - - gmx:100819183 602.053