Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04151 ATGGCTTATAGACGTTGCCTCTTGCAAAGAGGTAACCTCATAGACCGAAAGTTCCACCCGTCTTTCACCTATGTTATCCATAGCGGCGAAGAGAAGCGTGACCAGCCAGACGAAAAACCTTGTTCAACAGGAATCAGTAGTTTTATTCAATCAAGATCCTTTGGAAGTTCTCTTAACGGATCAACGGGTTTTTTCTCATCTTCTCAACATAGAAACCTTTCTCCTTTCGCTGCTTATAGTTTTTGTCGAAATATGTCGACAATGGATCATGATTCGGATAAGATTACCGCAATGACTGATGTAGCTGATGTTCTTATTGATACCAACATGGAGGCTGTAGCTTCTCAGGCTCCAGTTGTTAGTGAAGTTGCTATTGCTGCTGCTGATTCTTATTTGCCTGTACAAGCCTTGCAGTATGTTATAGATGCCGTGCATTCCTTCACTGGTTTAAATTGGTGGGCAGCCATAGTTCTAACAACTCTCTTGATTCGAAGTGCAACTGTTCCACTCTTAATAAATCAACTCAAGGCCACTTCTAAGCTTACCCTTATGAGGCCTCGCTTAGAAGAGATAAAGGAAAAAATTGATAGACAGACAATGGATCCTGAGGCTGTTGCTGAAGGTCAGAAGGAGATGTCAAAACTATTCAAAGAATATGGTGTGACTCCATTTACGCCAATGAAGGGACTCTTTATTCAAGGTCCTGTCTTCATTAGTTTTTTTCTTGCGATAACAAACATGTCTGAAAAAATGCCATCATTCAAACAAGGTGGAGCTTTCTGGTTCACTGATCTTACAACTCCAGATGCCTTATACATTTTCCCAGTTATAACTGCATTGTCATTTTTATTAGTAGTAGAGTGTAATATGCAAGAAGGCATGGAAGGAAATCCTATGGCTGCCACCATGAAAAATTTCTCAAGGATTCTTGCTCTTCTTTCCGTTCCTTTCACCATGAGTTTTCCAAAGGCTATATTTTGTTACTGGATTACATCAAATTTGTTTTCACTTTCATATGGAATGGTGCTTAGAGTCCCCGGTGTAAAGAAAACTTTAGGTATTGCTGACTTGCCTCCTGCAGAACCCATCAGCTCTCCAAAATCTCCCTTCTCAATATTTCCAGCACTAAAACAAGCGGCATCAATGGCAAATGGTCAAAGCTCATTTCCAATTGATTCATCCAAACAGTCAAATAAAAAGATATCCTCTTCTTCTTCTGCAGCTGTTATCAGTCAAAGGCTTAAAAGCTTGGAGAAACAAGTAAAAGGAAGAAAGAAAAGCAAGAAGTGA 1290 0.3984 MAYRRCLLQRGNLIDRKFHPSFTYVIHSGEEKRDQPDEKPCSTGISSFIQSRSFGSSLNGSTGFFSSSQHRNLSPFAAYSFCRNMSTMDHDSDKITAMTDVADVLIDTNMEAVASQAPVVSEVAIAAADSYLPVQALQYVIDAVHSFTGLNWWAAIVLTTLLIRSATVPLLINQLKATSKLTLMRPRLEEIKEKIDRQTMDPEAVAEGQKEMSKLFKEYGVTPFTPMKGLFIQGPVFISFFLAITNMSEKMPSFKQGGAFWFTDLTTPDALYIFPVITALSFLLVVECNMQEGMEGNPMAATMKNFSRILALLSVPFTMSFPKAIFCYWITSNLFSLSYGMVLRVPGVKKTLGIADLPPAEPISSPKSPFSIFPALKQAASMANGQSSFPIDSSKQSNKKISSSSSAAVISQRLKSLEKQVKGRKKSKK 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04151 429 MobiDBLite consensus disorder prediction 385 429 - -
Vivi5g04151 429 MobiDBLite consensus disorder prediction 385 413 - -
Vivi5g04151 429 CDD 5TM_Oxa1-like 149 346 - -
Vivi5g04151 429 PANTHER OXA1 111 413 IPR001708 GO:0016020|GO:0032977
Vivi5g04151 429 NCBIfam membrane protein insertase YidC 151 338 IPR028055 -
Vivi5g04151 429 Pfam 60Kd inner membrane protein 152 338 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04151 Vivi-Chr5 138027930 138039803 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04151 155 350 Chloroplast and Mitochondria Gene Families AT2G28800 26.238 1.38e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04151 K03217 - gmx:100817052 608.601