Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04139 ATGTTCACCTTTCTACAAACTTCTCTTTCACATGCAAATTTCTATTCACTATTCTTCACTATCTTCTCACTCTTACTCTCTTTTTTCTTCATAATCAAATATTGGTATTATTCCAACAATTCTTCTGCCACCACAAAAAACTACCCACCATCACCTCCAAGATTTCCACTACTTGGTAATCTCCATCAACTTGGCTTATTCCCTCACCGCACACTCCAAACATTATCTCACAAATATGGCCCTTTAATGCTTCTTTATTTTGGCAAGGTTCCAGTACTTGTGGTTTCTTCTGCTGATGCAGCAAGAAAAGTAATGAAAACTCACGATTTGGTTTTCTCCGATAGGCCACAAAGTAAAAACTTTGATATCCTTTTATACGGTTCCAAGGATGTGGCAAGTTGTGCATATGGCGAGTATTGGAGACAAATAAGGAGTCTCTGTGTGTTGCACGTTCTGAGTAACAGAAGAGTTCAATCTTATCGTCGTGTTAGAGAGGAAGAAACTTCAAGACTGATGGACTATATTAAGGAATATTCTTCTTCTGCATCGTCGCCGTTGAATTTATCTGAGTTGTGTTCTACTGTTACTAATGATATAATATGTAGGGTGGCTCTAGGAAAGAGATACCGTGAAGGAAGAGGGAAGAAATTTCAGGAAATGTTATTGGAGATGGGAGAATTATTGGGTACTGTATGTATAGGAAACTATATACCTTGGCTTGATTGGTTGGGAAAAGTTAATGGATTTTATAGAAAAGCGGAAAGAGTCGCCAAACATTTGGATGAGTTTATAGAAGAAGTGATTGAGGATCACATTCGTCGTAGATCTGATGGAGATGTTGGTGTGGATGATAATGATTTTGTGGATGTTTTACTTTCAGTTCAAAAGACTAATGATATTGGCTTCCTAATTGATAGAACTGCAATAAAAGCTTTGATACTGGACATGTTTGCTGCAGGTACCGATACTACGTACACAGTCCTAGAATGGGCAATGGCAGAACTGTTAAGAAACCAAACTGTGATGCATAAATTGCAAGATGAAGTGAGAACCATGGTTGGTAACAAAACTCATGTATCTGAAGAAGATTTGGTTAAGATGAATTACTTGAAGGCAGTGATCAAAGAAACACTTCGCCTCCATTTACCAATTCCGTTGTTAATCCCTCGGAGATGTATGGAAGATATCAAACTAGATGGCTATGACATTGCAGCTGGAACACAGGTAATTGTCAATGCTTGGGCTATTGCAAGACACCCTTCAAGTTGGGATGAACCTCTAGAGTTTAAACCAGAAAGGTTTATGAATAGTTTAATAGATTTTAAAGGAATGGATTTTGAACTTATACCATTTGGTTCTGGAAGGAGGGGCTGTCCTGGAGTGTCATTTGGTGTTGCTGTGATTGAATTGGTGCTAGCCAACCTTGTTAGCCAATTTGATTGGAAATTACCTAATGGAGTAGAAGGAAAGGATTTGGACATGTCTGAAACTTTTGGGCTTACCTGTCATAGAAAATACCCTCTCCTTGCAGTAGCTACTAAACATGAGAAAAAATGA 1557 0.3821 MFTFLQTSLSHANFYSLFFTIFSLLLSFFFIIKYWYYSNNSSATTKNYPPSPPRFPLLGNLHQLGLFPHRTLQTLSHKYGPLMLLYFGKVPVLVVSSADAARKVMKTHDLVFSDRPQSKNFDILLYGSKDVASCAYGEYWRQIRSLCVLHVLSNRRVQSYRRVREEETSRLMDYIKEYSSSASSPLNLSELCSTVTNDIICRVALGKRYREGRGKKFQEMLLEMGELLGTVCIGNYIPWLDWLGKVNGFYRKAERVAKHLDEFIEEVIEDHIRRRSDGDVGVDDNDFVDVLLSVQKTNDIGFLIDRTAIKALILDMFAAGTDTTYTVLEWAMAELLRNQTVMHKLQDEVRTMVGNKTHVSEEDLVKMNYLKAVIKETLRLHLPIPLLIPRRCMEDIKLDGYDIAAGTQVIVNAWAIARHPSSWDEPLEFKPERFMNSLIDFKGMDFELIPFGSGRRGCPGVSFGVAVIELVLANLVSQFDWKLPNGVEGKDLDMSETFGLTCHRKYPLLAVATKHEKK 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04139 518 FunFam Cytochrome P450 83B1 36 511 - -
Vivi5g04139 518 SUPERFAMILY Cytochrome P450 49 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04139 518 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04139 518 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04139 518 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04139 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Vivi5g04139 518 PANTHER CYTOCHROME P450 71B11-RELATED 29 514 - -
Vivi5g04139 518 Pfam Cytochrome P450 49 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04139 518 CDD CYP71-like 78 508 - -
Vivi5g04139 518 Gene3D Cytochrome P450 35 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04139 518 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04139 518 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04139 518 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04139 518 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04139 518 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04139 518 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04139 518 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04139 518 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04139 518 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04139 Vivi-Chr5 137848108 137850253 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04139 21 513 Cytochrome P450 AT3G48270 49.798 4.24e-180 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04139 - - gmx:100819183 679.093