Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04134 ATGGCTATGCAATCACCACCTTCTTTTTTCTCATATAACTTCACCTATGATGTGTTCCTCAGTTTCACAGGTGTTGATACCCGTCTAGGCTTTACTGGCAATCTCTACAAAGCTCTCACTGACAAGGGAATACGCACCTTCATCGATGACAGGGAGCTGCAAAGAGGGAAAGAAATCTCACCCTCACTTGGGAAGGCAATTGAAGAATCAAGGATTGTCATTCCTGTGTTCTCTACCAACTATGCTTCTTCTTCATTTTGCTTAGATGAACTTGTCCATATCAATGAGTGTGTCAACAAGAAGGGTCGTTTGGTTTTACCTGTATTCTATGGCGTGGATCCTTCTCACGTGCGTCATCAGACTGGAAGCTATGGTGAAGGATTGGATGAGCTGGAAGGCAGGTTTCAAAATAACATGGAGAGGTTGAAGAAATGGAAGTTGGCTCTTAATCAAGTGGCTAACTTGTCTGGCTACCATTTCAATATTGGGAAGGAATACGAATACGAGTTTATTGGAAAAATAGTCCAAGAGGTCTCCAACAAGATCTGCCGTGGTCCTTTACATGTTGCAGATTACCCGGTTGGACTCGAGTCTCGACTACTTCAATTAAAGTCGCATCTAGATATTAAATTCGATCATGGAATCCAAATGGTGGGGATCTACGGAATTGGCGGATTAGGTAAAACCACACTTGCACGGGCAATTTATAATTTGATAGCTGACAGATTTGAATGCTTGTGTTTTCTTCACAATGTTAGAGAAAATTCAGCTAAACACAGCTTAGAACATCTCCAAGAGAAGATTCTTTCCAAAACAGTTGACTTGGATATTAAGATAGGAGATGTTAGTGAAGGAATTCCGATAATAAAGCAAAGGCTACAGCGAAAGAAGGTTCTTTTGATTCTGGACGATGTTGACAAATTGAAGCAACTGCAAGTTATGGCTGGAGGACTTGATTGGTTCGGTCCTGGCAGCATAGTGATCATTACCACTCGAGACCAACATTTGCTAGATAGTCATGGAATTTATAGTAAATATCAAGTACAGCCGTTAAATAGAAAAGAATCCCTTGAATTGTTCAGCTGGAAGGCTTTTAAGCAACAAACGGTTGCTTCGAGCTATGATGACATTTTAGACCGTGCAATAGCTTATGCTTCTGGCCTTCCATTGGTTTTAGAAGTATTAGGTCCCAACATGTATGGGAAGAATATAGAAGAATGGAAATCTATATTAGATAGGTATGAAAGGATTCCTAATAAAGAGATCCAAAAGGTACTTAAAGTAAGCTTTGATGCTTTGGAGGAAGAAGAGCAGGGTGTTTTTCTCGACATTGCGTGTTGCTTCAAAGGGTATGATTTGAGAGAGGTCAAAGATATACTCTCAGCTCATCATGGCCAATGCATAGAATATCTTATTGGAGTCTTGGTCGAAAAAAATCTCATAAAGATTAGTCATTTGGATTCACATGCTACTGTGACATTACATGACTTAATAGAGGACATGGGTAAAGAAATTGTACGACAAGAATCACCCAAAGAGCCTGGAAAACGCAGTAGGTTGTGGTTCTATGAAGATATAGTTCAAGTTTTTGAAGAAAATTTGGGAACAAGTCAAATTGAAATTATACATTTGAAATTTCCATTATGTGAAGAGGAGGACGACAATGAAGAAGAGGTAGAATGGAAAGGAGATGAACTGAAGAAGATGAAAAACCTCAAAACACTTATTATAAAAAATGGTCGGTTTTCTAGAGCTCCTGAACAGCTTCCAAATAGTTTAAGAGTCTTGGAATGGCCTAGATATCCTTCGCAGTATATGCCATGTGATTTTCGTCCAAAAAAACTTTCCATATGCAAGTTACCTGGAAATGGCTTTACTTCGTTTGAGTTGTCTGGCTCATTAAGAAAGAGGTTTCTACATCTGAAAAAGTTAAATTTAGACAACTCTGAATGTCTAACGCAAATACTTGACGTATCTGGTCTCCAAAATTTAGAAGAGTTTTCTTTTCGAAAATGTGAGAATTTAGTCACAGTTCACGATTCGATTGGGTTCCTCAATAAGCTGAAAATCTTAGATGCTTTTGGGTGCAGCAAGCTAAAGAGTTTTCCGCCTTTGAAATTGGCATCTCTAGAAGAATTGGAACTTTCATTTTGTAAATGTCTTGAGAATTTTCCAGAAATATTAGGAAAGATGGAAAACTTAACTGACATTTTTTTTGTGGACACCTCCATCCAAGAATTGCCATTTTCATTTCAAAATCTTACTCGACTTCGTAAGTTAAGATTATGGGGACGTGGAAAGCACATGCTACAAAACAACATTGTCATGAAGCAAAAATTATTGACCAATGCTTCAGGTTGTCTGTCGCCAAAACCGGATGATAAATTGGGCTCGAGAGTGTTTTCAAATGTACAAAGGCTTGGACTCTCAAAATGTAACCCGTCAGATGAATTTCTTCCATTAATTCTAACATGGTCTGCTAATGTGGAACATTTAGATCTATCCGGGAATAATTTCACAACTCTTCCAAAATGTCTCGAAGAATGCTTCTTTTTAAGTTCCCTTAATTTGAATGGTTGCAAGTATCTTCGAGAAATTCAAGGGATTCCACCAAAGTTAAAGCATTTATCTGCATTACAATGCAAATCTTTGACTGCCATGAGTAGAAGCATGCTACTGAATCAGGAAGTGCATGAATATGGAGGAACTCAGTTTATTTTGCCAAGGAGTACAAAGATTCCAGAGTGGTTTGAGCATCAAAGTAGAGGACCATCAATTTCTTTTTGGTTTCGTAATAAACGCCCTTCCGTAACTCTCTGTGTGGTCTGTAAATCAAAGCGCGGCAAATATGAGGCATACTCAACACGAAACAAGTGCTTCAATAATGAACTCATTTCATTAAGGGTCAAACTGTTCATCAATGGCTATAAATATAAGTATTGCAAACTTGAGATAAAACAAGGCCATACACATGTGTATGATTTGCAACTGCATGACTTGCGTCTCAGATTAGCACTGGATAACGGCGGAATTTTTTCAACAAATAAATGGTTCCATGTAGAGGTTAGGTATGAAGGTTCAATGGTGAATTCACTTCGTATTAAAAGCGGAATCCACGTATTCACGCACAACAGTAGCATGGAGGATGTTCAATTCACTGATCCTTTGTGA 3171 0.3838 MAMQSPPSFFSYNFTYDVFLSFTGVDTRLGFTGNLYKALTDKGIRTFIDDRELQRGKEISPSLGKAIEESRIVIPVFSTNYASSSFCLDELVHINECVNKKGRLVLPVFYGVDPSHVRHQTGSYGEGLDELEGRFQNNMERLKKWKLALNQVANLSGYHFNIGKEYEYEFIGKIVQEVSNKICRGPLHVADYPVGLESRLLQLKSHLDIKFDHGIQMVGIYGIGGLGKTTLARAIYNLIADRFECLCFLHNVRENSAKHSLEHLQEKILSKTVDLDIKIGDVSEGIPIIKQRLQRKKVLLILDDVDKLKQLQVMAGGLDWFGPGSIVIITTRDQHLLDSHGIYSKYQVQPLNRKESLELFSWKAFKQQTVASSYDDILDRAIAYASGLPLVLEVLGPNMYGKNIEEWKSILDRYERIPNKEIQKVLKVSFDALEEEEQGVFLDIACCFKGYDLREVKDILSAHHGQCIEYLIGVLVEKNLIKISHLDSHATVTLHDLIEDMGKEIVRQESPKEPGKRSRLWFYEDIVQVFEENLGTSQIEIIHLKFPLCEEEDDNEEEVEWKGDELKKMKNLKTLIIKNGRFSRAPEQLPNSLRVLEWPRYPSQYMPCDFRPKKLSICKLPGNGFTSFELSGSLRKRFLHLKKLNLDNSECLTQILDVSGLQNLEEFSFRKCENLVTVHDSIGFLNKLKILDAFGCSKLKSFPPLKLASLEELELSFCKCLENFPEILGKMENLTDIFFVDTSIQELPFSFQNLTRLRKLRLWGRGKHMLQNNIVMKQKLLTNASGCLSPKPDDKLGSRVFSNVQRLGLSKCNPSDEFLPLILTWSANVEHLDLSGNNFTTLPKCLEECFFLSSLNLNGCKYLREIQGIPPKLKHLSALQCKSLTAMSRSMLLNQEVHEYGGTQFILPRSTKIPEWFEHQSRGPSISFWFRNKRPSVTLCVVCKSKRGKYEAYSTRNKCFNNELISLRVKLFINGYKYKYCKLEIKQGHTHVYDLQLHDLRLRLALDNGGIFSTNKWFHVEVRYEGSMVNSLRIKSGIHVFTHNSSMEDVQFTDPL 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04134 1056 Pfam NB-ARC domain 201 428 IPR002182 GO:0043531
Vivi5g04134 1056 Gene3D - 14 181 IPR035897 -
Vivi5g04134 1056 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 444 IPR027417 -
Vivi5g04134 1056 SMART AAA_5 214 396 IPR003593 GO:0016887
Vivi5g04134 1056 Gene3D Ribonuclease Inhibitor 733 893 IPR032675 -
Vivi5g04134 1056 Coils Coil 128 148 - -
Vivi5g04134 1056 Gene3D - 182 342 IPR027417 -
Vivi5g04134 1056 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Vivi5g04134 1056 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
Vivi5g04134 1056 SUPERFAMILY L domain-like 560 897 - -
Vivi5g04134 1056 SMART till_3 15 155 IPR000157 GO:0007165
Vivi5g04134 1056 PRINTS Disease resistance protein signature 217 232 - -
Vivi5g04134 1056 PRINTS Disease resistance protein signature 385 399 - -
Vivi5g04134 1056 PRINTS Disease resistance protein signature 292 306 - -
Vivi5g04134 1056 PRINTS Disease resistance protein signature 705 721 - -
Vivi5g04134 1056 Gene3D Ribonuclease Inhibitor 555 732 IPR032675 -
Vivi5g04134 1056 Gene3D - 350 434 IPR042197 -
Vivi5g04134 1056 SUPERFAMILY "Winged helix" DNA-binding domain 420 530 IPR036390 -
Vivi5g04134 1056 Pfam TIR domain 16 181 IPR000157 GO:0007165
Vivi5g04134 1056 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 881 IPR044974 GO:0006952
Vivi5g04134 1056 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 158 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04134 Vivi-Chr5 137711714 137716150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04134 5 789 WRKY Transcription Factor Family AT4G12020 30.938 7.94e-76 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04134 - - tpra:123910163 1148.65