LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi5g04133	ATGGTAGCTAGCAAACTCGGGTTTGGTGTTGTGATAGGAAGGTCTGACAATGACACTAGTAGAAGGCAAGCATTTGTAACAATGACATGCGAGAGAAGCGAAAAATATGTTCCAAAAATTCGGAAGTTAAAACATTATGTCACTGGATCGAGAAAATGTGAGTGTTTGTCTAAATTACGCGGATATTGTCGGGTGAATAATATGTGGCGATTTAATGTTATTTCTAGTATACATAATCATGTGTTGGACACCAAGCTACAAGGTCATCCAATTGTATGTTGGCTTAAGCCGGAGGAGAAGGAAATTATTTTGGAAATCTCAATAATCAAAGTTATGCCGAGAAACATACTTGTCGATCTGAAATGGAAAAGACCCCAAAGTGTTTCAGATATCAGGAAAATATACAATGAACATTATCAGCAAAACATGGCGAATAGAGGTACGAGATCCAAAATGCAACAACTTTTGAAACTTTTGGGTAATAACCAATATGTTTTAATGTACAAAATGTGTGAGGATAAATTCAGCGTCCGTGACATTTTTTGGTTTCATCCAGAAAGTATCAAGTTATTTAATACATTTCCAACCGTCCCTATAATTGATTCAACGTACAAGACCAACAAGTACAGACTCCCGCTTCTAGAAATTGGTGTCACTTCTACGGAAAAGACATTTTTTGTGGGATTTGCATTTTTGAAATATGAGAAAGAAGATAACGTCATATGGGCGTTAGAAAAGACATTGTTTTGGTGA	753	0.3612	MVASKLGFGVVIGRSDNDTSRRQAFVTMTCERSEKYVPKIRKLKHYVTGSRKCECLSKLRGYCRVNNMWRFNVISSIHNHVLDTKLQGHPIVCWLKPEEKEIILEISIIKVMPRNILVDLKWKRPQSVSDIRKIYNEHYQQNMANRGTRSKMQQLLKLLGNNQYVLMYKMCEDKFSVRDIFWFHPESIKLFNTFPTVPIIDSTYKTNKYRLPLLEIGVTSTEKTFFVGFAFLKYEKEDNVIWALEKTLFW	250

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi5g04133	250	Pfam	MULE transposase domain	199	246	IPR018289	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi5g04133	Vivi-Chr5	137708668	137709420	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Vivi5g04133		MULE	1e-07	CL0219

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi5g04133	-		-	vvo:131620442	309.301