Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04130 ATGGCAGAGGTGAAACTGCATGGATTTTGGTATAGTCCTTTTAATTTTAGAGTAGTATGGGCCCTAAATCTGAAGGGTATACTATATGAGCACATAGAAGAAGATCGTTTCAATAAGAGTCCTCAACTTCTTCGATACAATCCGGTATACAAAAATATTCCAGTGCTAGTTCATGATGGAAAACCCATATGTGAGTCCATGCTCATTGTTGAATACATTGATGAGATATGGCCTCAGAACTCATTGCTTCCTACTGATCCCTATGACAGAGCTCAAGCCCGGTTTTGGGTTAAATATGTTGATGACATGTTTACAGCAATTGGGGCACTCCTTGATAGCAGAAGTGATGAAGAACGAGAGAAGGCCAAAGAGAGTATATGGGAGCGACTCGGAGTTGTTGAGGATCAGTGTTTGGGAGATCAGAGGAAATTCTATAGGGGAGACACCATTAACATTGTAGACATAGCTCTTGGATCTTTTGTCAAAGTTATTGATGTTCAAGAGGATATGTTTGAAATGGAGATCTTGCAAAGTGAGAGGTTCCCACGATTGAAATTATGGTTTAATAATTTCAAGGATGTTCCAATCATCAAAGAAAACACTCCTAGTAAAGAGAAATTGGTTGCTCTTTTAAAGCCACTTACTGAAAAAAAATTTGCAAGGAAATGA 669 0.3857 MAEVKLHGFWYSPFNFRVVWALNLKGILYEHIEEDRFNKSPQLLRYNPVYKNIPVLVHDGKPICESMLIVEYIDEIWPQNSLLPTDPYDRAQARFWVKYVDDMFTAIGALLDSRSDEEREKAKESIWERLGVVEDQCLGDQRKFYRGDTINIVDIALGSFVKVIDVQEDMFEMEILQSERFPRLKLWFNNFKDVPIIKENTPSKEKLVALLKPLTEKKFARK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04130 222 SFLD Main.3: Omega- and Tau-like 1 218 IPR045073 -
Vivi5g04130 222 Pfam Glutathione S-transferase, C-terminal domain 102 199 IPR004046 -
Vivi5g04130 222 CDD GST_N_Tau 4 77 - -
Vivi5g04130 222 Gene3D - 83 221 - -
Vivi5g04130 222 Gene3D Glutaredoxin 1 82 - -
Vivi5g04130 222 SUPERFAMILY GST C-terminal domain-like 75 216 IPR036282 -
Vivi5g04130 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 207 IPR045073 -
Vivi5g04130 222 SFLD Main (cytGST) 1 218 - -
Vivi5g04130 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Vivi5g04130 222 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Vivi5g04130 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 210 IPR010987 -
Vivi5g04130 222 CDD GST_C_Tau 87 212 IPR045074 GO:0004364|GO:0006749
Vivi5g04130 222 FunFam Glutathione S-transferase GSTU6 1 84 - -
Vivi5g04130 222 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Vivi5g04130 222 FunFam Glutathione S-transferase U9 83 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04130 Vivi-Chr5 137678671 137680968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04130 3 217 Glutathione S-transferase Gene Family AT2G29450 41.935 3.34e-55 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04130 K00799 - gmx:547584 306.219