Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04099 ATGGATGAAGGTTGTAATTCTTGGGTTAGGAGGACAAATTTCTCTCACACGGTTTGTCACCGAATGGATTATTCGAGAATAGGCTCTTTCATCATTCCACCAGATGTTGTGCCCAATTCTGGTCTGAAGTCAAGGGCAGCATCATCGATATCATCAGCTGCATCAGCTTCAGCAACAGCAGCACCAGCAACAGCACCTCCTGTTGTTTCTAAGGTTTCAAAGGTTCAGAAGAATCCTTCGACAAATAAGCAGAGATCTGTGTCTCCTTTGCCTGAAACCCATCTCTCTGAAACCTTTAAGGAAGCCAAGCGTGAACAGCAGAGGTTCTCGACTCCAGGTCGTAGGAGGAAAGAACAGGATACAAGAATCATGGGGAAACTACTGAACAAGGATTCTCAAGTTTCCAAATCTACTTCGCCTCTGAAAAGTCCACTCAGGCACTTTGCATCAAAGAAATTCAGTGACAAGCCGAAGAACCGGAAGGACTCTGGGTGGACGAAGTATTTTGACCACGGTGGAGTAAAGGTTACTGCAGTAGAAACGGCTGAGGAATGGAATGTTGACCTCTGTAAGCTCTATGTTGGTGTTAGGTTTGCTTATGGAGCTCACAGTAGGCTTTACCATGGTAAGTATGAGGGAGAACCTGTTGCTGTGAAACTTATTAGGGTACCCGATGATGACGAAAATGGAATCTTGGCCGCTAAATTAGAGAAGCAATTCATCACAGAAGTCACACTTTTATCTCGACTCCACCACCAAAATGTTCTTAAGTTCGTAGCAGCATGCAGAAATCCACCTGTTTATTGTGTTATCACAGAATATCTATCCGAGGGTTCCTTGAGGGCATATTTGCATAAGTTGGAAGGAAAAACCATTTCTCTACAGAAGTTAATTGCCTTTTCTCTGGATATTGCTCATGGAATGGAATATATACACTCTCAGGGTGTCATTCATCGAGACCTTAAACCAGAGAATATCCTTATTAATGAAGACTTTCACCTTAAAGTCGCTGATTTTGGTATTGCTTGTGAGGAAGCACACTGTGACTTACTTGCTGATGACCCCGGTACCTACCGCTGGATGGCACCAGAGATGATCAGGCGAAAATCATATGGGAGAAAGGTTGATGTGTATAGTTTTGGCCTTATCTTATGGGAGATGTTTACTGGTACAATACCGTATGAGGATATGACTCCCATCCAGGCTGCTTTTGCTGTCGTAAATAAGAATTCAAGGCCTGTTATTCCTCCAAACTGCCCACCTGCTATGCGAGCTTTAATTGAGCAATGTTGGTCCTTGAATCCCGACAAAAGGCCCGAATTCTGGCAGGTTGTTAAGGTGTTAGAGCAGTTTGAATCTTCGCTTGCTCGTGATGGAACATTGACCCTGCTGCAAAACCCTTGTGGGCAAGATCATAAAAAAGGCCTTCTTCATTGGATTCACAAGCTTGTTCCTGCTCATCATAATATCGGTCCCGTGGTTAAACCAAAATTTACATGA 1500 0.436 MDEGCNSWVRRTNFSHTVCHRMDYSRIGSFIIPPDVVPNSGLKSRAASSISSAASASATAAPATAPPVVSKVSKVQKNPSTNKQRSVSPLPETHLSETFKEAKREQQRFSTPGRRRKEQDTRIMGKLLNKDSQVSKSTSPLKSPLRHFASKKFSDKPKNRKDSGWTKYFDHGGVKVTAVETAEEWNVDLCKLYVGVRFAYGAHSRLYHGKYEGEPVAVKLIRVPDDDENGILAAKLEKQFITEVTLLSRLHHQNVLKFVAACRNPPVYCVITEYLSEGSLRAYLHKLEGKTISLQKLIAFSLDIAHGMEYIHSQGVIHRDLKPENILINEDFHLKVADFGIACEEAHCDLLADDPGTYRWMAPEMIRRKSYGRKVDVYSFGLILWEMFTGTIPYEDMTPIQAAFAVVNKNSRPVIPPNCPPAMRALIEQCWSLNPDKRPEFWQVVKVLEQFESSLARDGTLTLLQNPCGQDHKKGLLHWIHKLVPAHHNIGPVVKPKFT 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04099 499 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 50 455 - -
Vivi5g04099 499 MobiDBLite consensus disorder prediction 71 93 - -
Vivi5g04099 499 FunFam serine/threonine-protein kinase HT1 277 468 - -
Vivi5g04099 499 Gene3D Phosphorylase Kinase; domain 1 180 276 - -
Vivi5g04099 499 MobiDBLite consensus disorder prediction 132 162 - -
Vivi5g04099 499 MobiDBLite consensus disorder prediction 96 119 - -
Vivi5g04099 499 ProSiteProfiles Protein kinase domain profile. 192 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g04099 499 Gene3D Transferase(Phosphotransferase) domain 1 277 471 - -
Vivi5g04099 499 Pfam Protein tyrosine and serine/threonine kinase 201 448 IPR001245 GO:0004672|GO:0006468
Vivi5g04099 499 PRINTS Tyrosine kinase catalytic domain signature 375 397 IPR001245 GO:0004672|GO:0006468
Vivi5g04099 499 PRINTS Tyrosine kinase catalytic domain signature 419 441 IPR001245 GO:0004672|GO:0006468
Vivi5g04099 499 PRINTS Tyrosine kinase catalytic domain signature 272 285 IPR001245 GO:0004672|GO:0006468
Vivi5g04099 499 PRINTS Tyrosine kinase catalytic domain signature 310 328 IPR001245 GO:0004672|GO:0006468
Vivi5g04099 499 PRINTS Tyrosine kinase catalytic domain signature 356 366 IPR001245 GO:0004672|GO:0006468
Vivi5g04099 499 SMART serkin_6 192 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g04099 499 MobiDBLite consensus disorder prediction 56 119 - -
Vivi5g04099 499 SUPERFAMILY Protein kinase-like (PK-like) 179 448 IPR011009 -
Vivi5g04099 499 CDD STKc_MAP3K-like 201 448 - -
Vivi5g04099 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 316 328 IPR008271 GO:0004672|GO:0006468
Vivi5g04099 499 MobiDBLite consensus disorder prediction 148 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04099 Vivi-Chr5 137317173 137320378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04099 1 487 MAP Kinase Kinase Kinase AT5G58950 56.832 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Vivi5g04099 PK_Tyr_Ser-Thr 1.1e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04099 - - psat:127105197 919.457