Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04075 ATGGGCGAGATTTCAAGTTCAGGTTACAAGGATTACGTCGCTGGCTTGCTCGCTGGAGTTTCCGCTGTAGCCACTGGTCACCCCTTTGATACCGTTAAGGTGAAGCTGCAGAAGCACAACGCCGAACCACATCTAGTTCAGTACAGAAATGGATTGCATTGCACTGCTAGGATATTCAAGACTGAAGGAATCAAAGGATTTTATAGAGGAGCAACGTCATCTTTTGCTGGGATGGCTTTGGAAGGATCTCTCTTTTTTGGCATTTATTCCCAGACAAAACAGTACCTTCAGGGGGGCGTTCAAAACGGTGCGCCACGGCCTCAAGTGATAATACCATCTGCAGCTCTTAGTGGTGCCATCAATAGTTTTGTGTTGGGTCCAACAGAACTGATAAAGTGTAGGATGCAGATCCAAGGCCCTGACTCTTTAGTTCTGATGTCGAGTAGATACAGTAGTCCTCTTGATTGTGCCACTAAAACTTTAAAAACTGAAGGGGTAAAAGGAATTTTTCGTGGAAGTGTTACGACATTGCTTAGAGAATCTATAGGGAATGCTACTTTTTTCAGTGTATATGAATATACGCGTTATCACATGCATTCACATATCAAACCCGCTTCATCCAATTATGGCAACCTGATTGAAATGGGGATCGGGGTTGTTACGGGTGGCGTTAGCGGCGTGGCTTTTTGGTTGGTAGCTATGCCTATCGACGTGGCAAAGACTCTAATTCAGACAAATCCTGATAAAAACTGTCAGACAAATCCGTTTATGGTTTTGAGTTCTATCTACAAGAGGACTGGTTTTAAGGGGTGCTATACAGGTCTGGGCCCCACATTAAGTCGGGCGTTTCCGGCTAATGCAGCAACAATTGTCACCTGGGAGCTAGCAATGAAAATGCTAGGCATCAGGCAGGACTAA 918 0.4488 MGEISSSGYKDYVAGLLAGVSAVATGHPFDTVKVKLQKHNAEPHLVQYRNGLHCTARIFKTEGIKGFYRGATSSFAGMALEGSLFFGIYSQTKQYLQGGVQNGAPRPQVIIPSAALSGAINSFVLGPTELIKCRMQIQGPDSLVLMSSRYSSPLDCATKTLKTEGVKGIFRGSVTTLLRESIGNATFFSVYEYTRYHMHSHIKPASSNYGNLIEMGIGVVTGGVSGVAFWLVAMPIDVAKTLIQTNPDKNCQTNPFMVLSSIYKRTGFKGCYTGLGPTLSRAFPANAATIVTWELAMKMLGIRQD 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04075 305 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 5 300 - -
Vivi5g04075 305 Gene3D Mitochondrial carrier domain 2 105 IPR023395 -
Vivi5g04075 305 Gene3D Mitochondrial carrier domain 106 304 IPR023395 -
Vivi5g04075 305 SUPERFAMILY Mitochondrial carrier 8 294 IPR023395 -
Vivi5g04075 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 299 IPR018108 -
Vivi5g04075 305 FunFam Mitochondrial amino acid carrier 180 304 - -
Vivi5g04075 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 197 IPR018108 -
Vivi5g04075 305 FunFam Mitochondrial carrier protein 2 109 - -
Vivi5g04075 305 Pfam Mitochondrial carrier protein 9 97 IPR018108 -
Vivi5g04075 305 Pfam Mitochondrial carrier protein 113 198 IPR018108 -
Vivi5g04075 305 Pfam Mitochondrial carrier protein 219 300 IPR018108 -
Vivi5g04075 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 95 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04075 Vivi-Chr5 136944456 136949254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04075 25 300 Antiporters AT1G79900 27.562 3.18e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04075 K15109 - gmx:100815087 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04075 5 136944456 136949254 Vivi5g04075 5 136944456 136949254 ECH