Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04061 ATGGATTCTGAGTTCTGGACCTCTCGTCTCGCCGCCGCGAAACGCCACTATACTTTTCAGCATAACCATCCAACTTCTCATTTAGGAATAGATGATTTTGATGTTGAAGAAGAGGTGAGACCAGATTTCCCTTGTCCCTATTGTTATGAAGAGTTTGATATAGGGTCTTTGTGTTCTCATCTTGAAGATGAACATTCATGTGAATCGAGAGTTACGATTTGTCCTGTATGTTCGGTTAAAGTTGCACGCGACATGTTGAGCCACATAACTCTGCAACATGGACACCTGTTTAAGATACAGCGAAGGCGCAGGTTAAGAAGAGTTGCAATTCCGAACAGTCAGTCATTGTCTCTCTTAGGTCGAGATCTCCGGGAAGCTCATTTACAGGTGCTTCTTAATGGTGGAGGTGGATACCGATCGCATAGTAACACAGTATCCAATGCGTCTGCTGATCCGTTTCTGTCCTCTTTTATTTTGAATTACCCTCAATGCGAAGCTGAAGAAATCTCTAAATCTGTCGTAACAAGTGCTGAAGATTCTTCTACAAAGAACACAACAACACCTGTACAACATATTTGGAAATCAAGTTTTGATCAATCGTTGAGTATCGAAGAGCGGGAGAAAAGGATTAGGCAAGCTGCCGGGAGGTCTAGTTTTGTGCAGGATTTGTTTCTGTCAACCTTGTTAGGCGACTAA 696 0.4267 MDSEFWTSRLAAAKRHYTFQHNHPTSHLGIDDFDVEEEVRPDFPCPYCYEEFDIGSLCSHLEDEHSCESRVTICPVCSVKVARDMLSHITLQHGHLFKIQRRRRLRRVAIPNSQSLSLLGRDLREAHLQVLLNGGGGYRSHSNTVSNASADPFLSSFILNYPQCEAEEISKSVVTSAEDSSTKNTTTPVQHIWKSSFDQSLSIEEREKRIRQAAGRSSFVQDLFLSTLLGD 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04061 231 Pfam Drought induced 19 protein (Di19), zinc-binding 42 94 IPR008598 -
Vivi5g04061 231 PANTHER PROTEIN DEHYDRATION-INDUCED 19 29 229 IPR033347 -
Vivi5g04061 231 Pfam Stress-induced protein Di19, C-terminal 116 228 IPR027935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04061 Vivi-Chr5 136736550 136739819 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vivi5g04061 Di19_C 6.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04061 - - gmx:100792230 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04061 5 136736550 136739819 Vivi5g04061 5 136736550 136739819 ECH