Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04060 ATGATAATTAGTTTATTCTCATCATCTTCAACCCTGCCAATTACCATATGCCCTACGTTCTTGTTTCTCTTCTTTCTCTTTTGGCTACGTAGAAGCAACACTAGCACAACCGGTCTTGCAGCTAAAAAGACACCACCAGAAGTCGCCGGAGCTTGGCCTTTAATCGGCCACCTCCACCTCTTAGTTGGGTCCCAACCACCTCACGTCACGTTGGGGAAATTAGCCGACAAATACGGACCCATCTTCACCTTACGCTTAGGTGTTCATCGAACTTTAGTTGTAAGCAGTTACGAAACGGCGAAAGAGTGTTTCACAGTAAACGACAAAGCGTTTGCTTCACGTCCAAAATCAGTAGCCTTTGAAATTCTAGGGTATAACTTCTCCATGTTCGGTTTCAGCCCCTACGGTTCCTACTGGCGCACCATGCGCAAGATAGCGACTGTTCATGTCCTCTCCGCGCAACGGACAGAGACATTGCTGAAACAAGTGATGGAATCTGAGGTGAAGATAGCAATGAAAGAGAGTTATGACTTTTGGATAAAGATGAAGAACAACAAGGAAGGTTCTGAAAGGGCAATTACGGAAATGAAGAAATGGTTTGGGAACATAGCGTTAAATGTTATGTTTAGAACGGTGGTGGGAAAACGGTTTGACGGTGATGAGGAAGAGAATCAACGGATTAGAAAAGCGCTTAGGGATTTGTTTGATCTTACTGGTTCGTTTGTTATATGTGACACGTTGCCGTATTTGAGATGGTTGGATTTGGATGGAAAAGAGAAGGAAATGAAGAAAACTGCGAAAGTGTTGGATGAGTTTGTATGTGTTTGGCTTGATGAACATAAACGGAATAGGAAACCTGCTGGCGGCGAACATGACTTCATGGATGTTCTTCTTTCAACGGTTGATGATCAAGATTTGGACGGTCGTGATTCCGACACTACAATCAAAGCTACTTGTCTGGCACTAATTCTAGCAGGTACCGACACTACAGCGGGAACATTAACTTGGACACTATCATTACTTCTGAACAATCCTGAAGTCTTAAGCAAAGCCACTCAAGAATTAGATGCACAAATTGGCATAGAAAACATGGCAATAAAATCTGATTTGACCAAGTTGGAATATATTCAAGCCATTATTAAAGAAACTTTACGTTTGTATCCACCAGCGCCACTGAATGTTCCTCATGAGTCTATTGAAGATTGTACCGTTGGAGGATATCACGTTCCAGCTGGCACGCGTCTCCTAACCAACTTTTCGAAACTTCAACGAGACCCTACATTATATTCAGATCCGTTGGAGTTTCGACCAGAGAGATTTCTCACAACACACAAGAATGTTGATGTTAAGGGACAACATTTTGAATTGATGCCATTTGGTGCTGGTAGAAGAATGTGTCCTGGAATATCAGTTGGTCTTCAATTAATGCAAATAACACTTGCTACTTTGTTGCATGGTTTTGACATAATGACTCCTGATGAAGGACCGGTTGATATGGCTGAACATAATGGGCTCACCACAATCAAAGCCTCTCCTCTCGAAGTCGTTCTCACTCCGCGCTTGTCTGCCCAAGCTTTTAGTCAAAATTAA 1590 0.4264 MIISLFSSSSTLPITICPTFLFLFFLFWLRRSNTSTTGLAAKKTPPEVAGAWPLIGHLHLLVGSQPPHVTLGKLADKYGPIFTLRLGVHRTLVVSSYETAKECFTVNDKAFASRPKSVAFEILGYNFSMFGFSPYGSYWRTMRKIATVHVLSAQRTETLLKQVMESEVKIAMKESYDFWIKMKNNKEGSERAITEMKKWFGNIALNVMFRTVVGKRFDGDEEENQRIRKALRDLFDLTGSFVICDTLPYLRWLDLDGKEKEMKKTAKVLDEFVCVWLDEHKRNRKPAGGEHDFMDVLLSTVDDQDLDGRDSDTTIKATCLALILAGTDTTAGTLTWTLSLLLNNPEVLSKATQELDAQIGIENMAIKSDLTKLEYIQAIIKETLRLYPPAPLNVPHESIEDCTVGGYHVPAGTRLLTNFSKLQRDPTLYSDPLEFRPERFLTTHKNVDVKGQHFELMPFGAGRRMCPGISVGLQLMQITLATLLHGFDIMTPDEGPVDMAEHNGLTTIKASPLEVVLTPRLSAQAFSQN 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04060 529 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04060 529 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04060 529 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04060 529 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04060 529 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04060 529 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04060 529 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04060 529 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04060 529 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04060 529 FunFam Cytochrome P450 82C4 36 518 - -
Vivi5g04060 529 Pfam Cytochrome P450 48 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04060 529 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04060 529 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04060 529 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04060 529 SUPERFAMILY Cytochrome P450 46 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04060 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Vivi5g04060 529 Gene3D Cytochrome P450 40 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04060 529 PANTHER CYTOCHROME P450 82C3-RELATED 22 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04060 Vivi-Chr5 136715810 136719055 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04060 46 526 Cytochrome P450 AT4G31940 49.395 4.20e-172 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04060 - - gmx:100778017 698.353