Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04059 ATGATGAAAAATAATCTAATCTCACCATTTACTATCTGCACCACATTACTACTCTTTGTCTTTACTATATTTTTGCTACGGATCAGAAGCCGTGTAGCTAAAAAAGCACCCCCGGAAGCCAGCGGCGCATGGCCTATAATCGGCCATATTCATCTCTTACGTGGATCCCAACCACCTCACGTCTCATTGGGGAAAATGGCTGAAAATTTTGGACCAATCTTCACCGTTCGTTTGGGTGTTCACAAAACCCTAATCGTAAACAGTTATGAAATGGCAAAGCAGTGTTTCACCGTAAACGACAGAGCCTTTGCTTCCCGTCCAAAATCTATAGCCTTTGAAATTTTGGGTTATAACTTTTCCATAATAGGTTTCAGTCCCTACGGTACTTACTGGCGCACAGTGCGCAAGATAGCAACGCTCCATGTTCTCTCTGCTCAACGAATAGAGATGCTGAAGCAGGTGATGGAATCTGAAGTGAAGACAGCAATGAAAGAGAGTTATGACCTTTGGCTAAAAACAAAGAAGCAGAAAGGTTGTGAAGGAACTGAAATGAAGAAATGGTTTGGAGACATAGCAATTAACGTTATGTTGAGAACAGTTGTTGGAAAACGTTTTGACGGTGAAGAGGAAGAGAATGAACGGATCAGAAAAGCACTTAGGGACTTGTTTTATCTGAGTGGTTCATTTGGTATCTCGGATGCATTGCCGTATTTGAGATGGTTCGATTTAGATGGAAGAGAGAAGGAGATGAAGAGAACCGCGAAAGATTTAGATGATTTCGCTACGATTTGGCTAGATCAACACAAACAAAGTACTATTCCTGGAAGTCAACGGGACTTCATGGATGTGCTTCTATCCAAAGTTGATGAAGAAGGTGTTGACGGTCGTGACGCAGATACCACAATTAAATCAACATGTCTGACACTAATTTTGGCAGGCACTGACACTACAACAGGAACATTAACTTGGGCATTAGCTTTACTTCTCAACAACCGAGAAACCCTAAACAAGGTTGTACATGAATTAGATACACAAATTGGTGACAAAAATATGGGAATGGATATAGATTTGACAAAATTGGAGTATCTCCAAGCCATTATCAAGGAAACATTGCGTTTGTATCCACCCGCACCACTCAATTTAGCTCACGAGTCCATTGAAGATTGTATTGTGGGTGGATATCATGTGCCTTCTGGCACACGTCTATTGACTAACATTTCAAAACTTCAACGAGATCCTATGTTATATTCGAATCCATTAGAGTTTCGACCAGAGAGATTTCTCACAACACATAAAGATGTTGATGTTAAAGGGCAACATTTTGAGTTGATTCCATTTGGTGCAGGTAGAAGAATATGTCCCGGAATCTCATTTAGTCTTCAACTAATGCAATTAATACTTGCTTATTTGTTGCATGGATTTGACATAGTGACTCAAGATGGAGGAGAAGTTGATATGGCTGAACTAAGTGGACTCACTAATGTTAAAGCTTCTCCACTCCAAGTTATTCTCACTCCTCGTCTCTCAGCTCAAGTTTGTAGTCAAAATTAA 1551 0.403 MMKNNLISPFTICTTLLLFVFTIFLLRIRSRVAKKAPPEASGAWPIIGHIHLLRGSQPPHVSLGKMAENFGPIFTVRLGVHKTLIVNSYEMAKQCFTVNDRAFASRPKSIAFEILGYNFSIIGFSPYGTYWRTVRKIATLHVLSAQRIEMLKQVMESEVKTAMKESYDLWLKTKKQKGCEGTEMKKWFGDIAINVMLRTVVGKRFDGEEEENERIRKALRDLFYLSGSFGISDALPYLRWFDLDGREKEMKRTAKDLDDFATIWLDQHKQSTIPGSQRDFMDVLLSKVDEEGVDGRDADTTIKSTCLTLILAGTDTTTGTLTWALALLLNNRETLNKVVHELDTQIGDKNMGMDIDLTKLEYLQAIIKETLRLYPPAPLNLAHESIEDCIVGGYHVPSGTRLLTNISKLQRDPMLYSNPLEFRPERFLTTHKDVDVKGQHFELIPFGAGRRICPGISFSLQLMQLILAYLLHGFDIVTQDGGEVDMAELSGLTNVKASPLQVILTPRLSAQVCSQN 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04059 516 PANTHER CYTOCHROME P450 82C3-RELATED 16 511 - -
Vivi5g04059 516 SUPERFAMILY Cytochrome P450 42 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04059 516 Gene3D Cytochrome P450 23 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04059 516 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04059 516 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04059 516 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04059 516 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04059 516 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04059 516 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04059 516 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04059 516 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04059 516 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04059 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Vivi5g04059 516 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04059 516 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04059 516 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04059 516 Pfam Cytochrome P450 40 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04059 516 FunFam Cytochrome P450 82C4 27 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04059 Vivi-Chr5 136705564 136707912 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04059 8 512 Cytochrome P450 AT4G31940 46.641 5.62e-166 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04059 - - gmx:100778017 683.33