Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04058 ATGATGAAAAATAATCTAATCTCACCATTTACTATCTGCACCACATTACTACTCTTTGTCTTTACTATATTTTTGCTACGGATCAGAAGCCGTGTAGCTAAAAAAGCACCCCCGGAAGCCAGCGGCGCATGGCCTATAATCGGCCATATTCATCTCTTACGTGGATCCCAACCACCTCACGTCTCATTGGGGAAAATGGCTGAAAATTTTGGACCAATCTTCACCGTTCGTTTGGGTGTTCACAAAACCCTAATCGTAAACAGTTATGAAATGGCAAAGCAGTGTTTCACCGTAAACGACAGAGCCTTTGCTTCCCGTCCAAAATCTATAGCCTTTGAAATTTTGGGTTATAACTTTTCCATAATAGGTTTCAGTCCCTACGGTACTTACTGGCGCACAGTGCGCAAGATAGCAACGCTCCATGTTCTCTCTGCTCAACGAATAGAGATGCTGAAGCAGGTGATGGAATCTGAAGTGAAGACAGCAATGAAAGAGAGTTATGACCTTTGGCTAAAAACAAAGAAGCAGAAAGGTTGTGAAGGAACTGAAATGAAGAAATGGTTTGGAGACATAGCAATTAACGTTATGTTGAGAACAGTTGTTGGAAAACGTTTTGACGGTGAAGAGGAAGAGAATGAACGGATCAGAAAAGCACTTAGGGACTTGTTTTATCTGAGTGGTTCATTTGGTATCTCGGATGCATTGCCGTATTTGAGATGGTTCGATTTAGATGGAAGAGAGAAGGAGATGAAGAGAACCGCGAAAGATTTAGATGATTTCGCTACGATTTGGCTAGATCAACACAAACAAAGTACTATTCCTGGAAGTCAACGGGACTTCATGGATGTGCTTCTATCCAAAGTTGATGAAGAAGGTGTTGACGGTCGTGACGCAGATACCACAATTAAATCAACATGTCTGACACTAATTTTGGCAGGCACTGACACTACAACAGGAACATTAACTTGGGCATTAGCTTTACTTCTCAACAACCGAGAAACCCTAAACAAGGTTGTACATGAATTAGATACACAAATTGGTGACAAAAATATGGGAATGGATATAGATTTGACAAAATTGGAGTATCTCCAAGCCATTATCAAGGAAACATTGCGTTTGTATCCACCCGCACCACTCAATTTAGCTCACGAGTCCATTGAAGATTGTATTGTGGGTGGATATCATGTGCCTTCTGGCACACGTCTATTGACTAACATTTCAAAACTTCAACGAGATCCTATGTTATATTCGAATCCATTAGAGTTTCGACCAGAGAGATTTCTCACAACACATAAAGATGTTGATGTTAAAGGGCAACATTTTGAGTTGATTCCATTTGGTGCAGTGACTCAAGATGGAGGAGAAGTTGATATGGCTGAACTAAGTGGACTCACTAATGTTAAAGCTTCTCCACTCCAAGTTATTCTCACTCCTCGTCTCTCAGCTCAAGTTTGTAGTCAAAATTAA 1467 0.407 MMKNNLISPFTICTTLLLFVFTIFLLRIRSRVAKKAPPEASGAWPIIGHIHLLRGSQPPHVSLGKMAENFGPIFTVRLGVHKTLIVNSYEMAKQCFTVNDRAFASRPKSIAFEILGYNFSIIGFSPYGTYWRTVRKIATLHVLSAQRIEMLKQVMESEVKTAMKESYDLWLKTKKQKGCEGTEMKKWFGDIAINVMLRTVVGKRFDGEEEENERIRKALRDLFYLSGSFGISDALPYLRWFDLDGREKEMKRTAKDLDDFATIWLDQHKQSTIPGSQRDFMDVLLSKVDEEGVDGRDADTTIKSTCLTLILAGTDTTTGTLTWALALLLNNRETLNKVVHELDTQIGDKNMGMDIDLTKLEYLQAIIKETLRLYPPAPLNLAHESIEDCIVGGYHVPSGTRLLTNISKLQRDPMLYSNPLEFRPERFLTTHKDVDVKGQHFELIPFGAVTQDGGEVDMAELSGLTNVKASPLQVILTPRLSAQVCSQN 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04058 488 PANTHER CYTOCHROME P450 82C3-RELATED 16 448 - -
Vivi5g04058 488 Coils Coil 488 488 - -
Vivi5g04058 488 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04058 488 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04058 488 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04058 488 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04058 488 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04058 488 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04058 488 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04058 488 FunFam Cytochrome P450 82C4 27 451 - -
Vivi5g04058 488 SUPERFAMILY Cytochrome P450 42 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04058 488 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04058 488 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04058 488 Pfam Cytochrome P450 40 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04058 488 Gene3D Cytochrome P450 23 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04058 Vivi-Chr5 136705561 136707915 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04058 8 484 Cytochrome P450 AT4G31940 44.061 1.02e-147 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04058 - - gmx:100778017 627.091