Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi5g04051 | ATGGAAGGGGACGGTAGTTCGGAGGGAGAGAGTGATCGGAAAAGGGGCGGTGGCAGCGATGATAACGGCAATAACGGTGAAAGCAATAGCAAGATTGCTGTTTCCAATGAAGGTCAGAGCAAGCCTAAGAGGCAGATGAAGACGCCGTTTCAGCTTGAAACCCTTGAGAAAGCTTATGCATTGGATAATTACCCTTCGGAGCCTGTGAGGATTGAGTTGTCTGAGAAATTGGGGTTGACGGATCGGCAGCTGCAGATGTGGTTCTGCCACAGGAGGTTGAAGGATAAGAAGGAGGCGTCGGCTCCCAAAAAAGAGTCTGTTGCTGCTCCAAAGAAGGTGCCAGTGTCACGTAAGCCAGCAGCCGAGCCTTTGCCGGATTCGCCGGTGGATGACCTTAGGTTAGATTCTGATCATGGTAATGGGTATGGATCAGGGTCGGGTTCAGGTTCGAGTCCGTATGCACGGTTGGAGTCTCTGAATGCAATCCCTGTCAGTGTTGGTTACTATGAGTCCCCACAGGCTGAAATGGAGCTTAGAGCAATTGCTTGTGTGGAGGATCAGTTAGGTGAACCATTGAGGGAAGATGGGCCCATTCTAGGAATAGAGTTCGAGCAATTGCCACCAGATGCATTTGGAGCACCTATAGCAGTTACAGAACACCAGAAGAGACCTCGTCTTGCCTATGACAGTAAAATATATGGAAGACATGATGTTAAAACAAACAAGGCTATGGCAAGGACTTTTCCTGAATATCAATATTCACCTAACCAGTCCGGCGCTAGATCTGATGCATTTGGACAGTTCAGCCAATCTCATTTACATGTTCCAAAGGAGGGTTCATCTAAAAAGCCTCAGTCTGTGCTTGGTAATGAACGGCCACCTAGAATTCATGGCATCAAGGGTCATTCTTCTCGCGTCTCCCAACAAGACAAGCAAGGGAGTCCCTTCCAATCTCCACCTCGGGACAATGATGTTACCCCTTCACGGGAATTGTACACAAGTACGGGGAAAGTTGGAATAAACTCCCACCTCACTGATAGCCAAACTGTTGGGCTGGAAAATACCTATGCTTCACCTAGTGGACAAATTTTGCAAAACAATGCAATGCATATCGATAGGAAACGAAAGGGTGATGATACCAAAATTACAAGGGATGTTGAAGCAAATGATATGAGAATCCGGAAAGAGCTCGAAAAACAAGAAAACCTCAGACGAAAGAATGAGGAGCGAGTAAAAAAAGAAATGGAGAGACAAGATCGTGAAAGAAAAAAGGAAGAAGAGAGATTGATGCGTGAGAGACTGCGTGAAGAGGAAAGAACAAAACGAGAGGAAAAACGTGAAAGTGAACGAAGGGAAAAGTATTTGCAGAGAGAAAATTTAAAAGCTGAGAGAATGAGGCAAAAAGAAGAGCTTCGGAAAGAGAAAGATGAAGAAAGAAGGAAAGCTGCCCTTGAGAAGGCAACTGCCCGTAAAATAGCTAAGGAATCCATGGAACTTATTGAGGATGAACAGCTGGAAATGATGGAGTTAGCTGTCTCAAGCAAGGGGCTTTCCTCTATTGTCCGTCTTGATTTTGATACTTTGCAAAACATTGAGTCATTTAGGGATTCATTGTGTCTTTTCCCACCTGAGAGTGTAAAGCTAAGAAAACCATTTGCTATCCAACCATGGATCAATTCAGAAGAGAATATTGGCAACCTTCTCATGGTTTGGAGGTTTTTGATTACCTTTGCTGATGTTTTGGAGTTATGGCCTTTTACTCTTGATGAGTTCGTGCAAGCATTTCACGATTATGATTCAAGATTGTTGGGTGAGATACATGTTTCTCTCCTTAAGGTGATAATGAAAGACATTGAAGATGTTGCAAGGACACCTTCTTCAGGACTAGGAATGAATCAGAATGGTGCTGCTAATTCTGGAGGCGGCCATCCAGAGATTGTGGAAGGGGCATATGCTTGGGGCTTTGACATACGGAATTGGCATAGGCACTTAAATCAATTGACATGGCCAGAAATTTTCCGACAGCTAGCATTATCTGCAGGATATGGACCGCAGTTTAAGAAAAGCAGTATTCTGTGTTCACGTGCAAATAATAAAAATGAGGGAAGAAATTGTGAAGATGTCGTTTCTGCACTTCGCAATGGTTCAGCAGCTGTAAATGCCGTGACAAAAATGCAGGAGAGAGGTCTATTAGGTCCTCGGAGATCTAGGCATCGGTTAACTCCTGGAACAGTTAAATTTGCGGCATTTCATGTTCTCTCACTAGAGGATGGTGAGGGATTGAATGTAATAGAGCTTGCCGAAAAAATTCAGAAATCTGGTCTTCGGGACCTGACGACCAGCAAGACCCCCGAGGCATCAATTTCTGTTGCTTTGACCAGAGATGCCAAGCTTTTTGAAAGAGTAGCCCCATCAACTTATTGTGTACGTGCTGCATTTAGGAAGGATCCTGCTGATGCTGAGTCCATTCTTTCTGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCTAGCTGAAGAAGATGCTGATGATGTGGAAAGAGAAGAGTCAGAAAGTGAAGTTGACGAGGATCCTGAAGTTGATGATTTGGTTAATCCTTCAAGTGTTAACAAAACATCTGAACTGTTCAATGATTTCTCATCAAATGGAAAAGAAATTCAAGGTCATGATGGAAAACTTAAAGAGGAGTTCGATAAGGATCTACCTTGTTTTCCTGACAATGGCTCCAAGAATGCTGATTATCCAAGTGCTGTTTCTGGACAACCTGTTGCTTGTGAAAATCTAAGTGCCAGAAATCTAGGCGAAGATAATATGGAAATTGATGAAAGTAAGTCTGGAGAGTCATGGATTCAAGGGCTTACTGAAGGAGAATATTCTGATCTCAGTGTAGAGGAGCGATTAAATGCTCTTGTTGTATTGGTTGGTGTGGCAAATGAAGGCAATTCAATCCGTGTTGTTCTTGAGGATCGTTTGGAAGCAGCAAATGCTCTGAAGAAGCAAATGTTGGCAGAGGCACATATTGATAAAACTCGCGTGAAAGATGATAATGTCAACAAATCAGATTTTCCTTCTATCAATGGTATCAAGGTTGAAACACAGATTGCATCTGCTGCTGTGGAGAGCAATCAAAGCCCATTGCTTGATATTAATATTTGCAATAATAATAATAATGATGAGGATTCTCCTAGCAAAGCAGAAAATAAAAGGCTAGCTCTTGTTGGACAAAGCCTCTCTGAAAAGCTCTCATCAGGTCAAGATCTCTGCATAGGTCCTGATAATGCTCAGACTATGTTATCTGCACAATATTCAAAACGGTCACGATCTCAGTTAAAGTCTTACATTTCCCACATAGCAGAGGAGATGTACATCTATAGATCCTTACCCCTCGGGCAAGACCGCAGACATAATCGATATTGGCAGTTTGTTGCATCTGCTTCTTGTAATGATCCTGGCTCGGGCAGGATCTTTGTTGAATATCATGATGGCAAATGGAGGCTTATTGATTCCGAAGAGGCCTTTGACACGCTTCTGAATTCATTGGATTCACGTGGGATCAGGGAATCACATTTGCGTCTGATGTTGCTAAAGATTGAGAATACATTTAAGGAAAATGTTCAAAAGAATGCAAAATGTGCCAAAATTGGAAACACAAACGAAATACGTGTTAAAAATGAAGCTGATGAAACAGATTCCAGTCCTGATCATCATACTAGTTCTGACAGTCCTAGCAGTACTATCTGTGGCTTGAGCTCTGATACTTCAGAAACATCGTCATCCTTCAGAATTGAACTTGGAAAAAGTGAGAGCGACAAGAAAGCTGCCTTGAGAAGGTATCAAGATTTCCAAAAATGGATGTGGAAAGAATGCTATAACCCATCAATATTATGTGCAACGAAATATGGAAAGAAGAGATGCAAACCTCAGGTTGACATATGTGATATCTGTCTCAACCTTTATTGCTTGGAAGACTCGCATTGCAGTCATTGCCACCTTACTTTTCCGTCAAATGATGGATTTAGTGTTTCTAAACATGCAATTCAATGTGGAGACAAGTTACCCAAAGATATTTGTATTCCAGAATCTCCTCTTCCATTGCGAACAAGGTTGCTCAAGGCTCTGCTGGCTTTTATTGAGGTATCTGTTCCACCTGAAGCATTTCAGTCAATTTGGACCGAGGATATTAGGAGGTTTTGGGGTGTGAAGTTGAGCAGATCATCTTCTGCTGAGGAACTTCTACAGATATTGACTCTATTTGAGAGAGCACTAAATCGAGACTTTTTATCATCACCTTTTGCTACAACTGGGGATTTGTTGGGGATGAACACTATGTCGGAGAGTGCCGCACTTACTTCTATGGATCTCAAATCAGTTACTGTTCTTCCATGGGTTCCACGGACCACTTCAGCTGTGTCTCTCAGACTTTTTGAGTTTGATACATCAATCACCTATGTAAAGCTTGAGAAACCTGATCCCTATCAGGAAAGAGAAGCTAGATACATAAAGCTTCCTTCAAGATATGCCGGTGTTAAATCTACTAAAGCGGTTGAACCATCATATATGGACTGTGATGAATTCATGAAAGTGAAGTCTGCCCCTATGAAAATTGTGCGAAGCAGCAGAAAACGGGCACGAGGGAATCATGACAAAGGAAGGGCTAAAAACCTGTCTAAAAGAACAAATGATTCCAAAAGAGACAACGGTCTCCTCAATTTTGAGGTCACTGAGAATCTAAGTCAAAGATTAAAACAGCAGGGACAAGGATCACAAGGGCACACAGGTGGACGTGGCCGCCGGACAGTTAGGAAAAGGAGAGAGGAGAATAGGGTTGATGATTTGTTGCTTAGCGATAGGGCTGCCATTACTAGCTCCAATTTTAGTAGAGAACCATCAAGAATCATGGACGAGGACTGGAGTGATGAGAAGCCAAGTCCCATCCCGAGGGAAGCTGCTGACATGAGTAGCAGCAGTGAAGAGGATGAATATGATGACAACACCCAGCCAATGGAATCTGATGACAATGTCGAAGCAGTTGAGTATGGTCAAGGAAACTGGGAGATAGGTTTTAATGGTACCCCCAACAGATGGAATAGGAATTTGGTTGGAATGAGTGATGAAGAACAACACTTGGAGGCTTCTGAAGATGACAATGACAATGGCATTGAAGGGAATGGAGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGATGGTTCTGAAGCAGATGTTATTATGAGTGATGATGGTATGGCAAATAGAGTTGTAAATGAAGAAAGCTCAGACTCGAGTGACTCGGAAGATTATTCTGATTAG | 5313 | 0.4267 | MEGDGSSEGESDRKRGGGSDDNGNNGESNSKIAVSNEGQSKPKRQMKTPFQLETLEKAYALDNYPSEPVRIELSEKLGLTDRQLQMWFCHRRLKDKKEASAPKKESVAAPKKVPVSRKPAAEPLPDSPVDDLRLDSDHGNGYGSGSGSGSSPYARLESLNAIPVSVGYYESPQAEMELRAIACVEDQLGEPLREDGPILGIEFEQLPPDAFGAPIAVTEHQKRPRLAYDSKIYGRHDVKTNKAMARTFPEYQYSPNQSGARSDAFGQFSQSHLHVPKEGSSKKPQSVLGNERPPRIHGIKGHSSRVSQQDKQGSPFQSPPRDNDVTPSRELYTSTGKVGINSHLTDSQTVGLENTYASPSGQILQNNAMHIDRKRKGDDTKITRDVEANDMRIRKELEKQENLRRKNEERVKKEMERQDRERKKEEERLMRERLREEERTKREEKRESERREKYLQRENLKAERMRQKEELRKEKDEERRKAALEKATARKIAKESMELIEDEQLEMMELAVSSKGLSSIVRLDFDTLQNIESFRDSLCLFPPESVKLRKPFAIQPWINSEENIGNLLMVWRFLITFADVLELWPFTLDEFVQAFHDYDSRLLGEIHVSLLKVIMKDIEDVARTPSSGLGMNQNGAANSGGGHPEIVEGAYAWGFDIRNWHRHLNQLTWPEIFRQLALSAGYGPQFKKSSILCSRANNKNEGRNCEDVVSALRNGSAAVNAVTKMQERGLLGPRRSRHRLTPGTVKFAAFHVLSLEDGEGLNVIELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERVAPSTYCVRAAFRKDPADAESILSEARKKIQIFENGFLAEEDADDVEREESESEVDEDPEVDDLVNPSSVNKTSELFNDFSSNGKEIQGHDGKLKEEFDKDLPCFPDNGSKNADYPSAVSGQPVACENLSARNLGEDNMEIDESKSGESWIQGLTEGEYSDLSVEERLNALVVLVGVANEGNSIRVVLEDRLEAANALKKQMLAEAHIDKTRVKDDNVNKSDFPSINGIKVETQIASAAVESNQSPLLDINICNNNNNDEDSPSKAENKRLALVGQSLSEKLSSGQDLCIGPDNAQTMLSAQYSKRSRSQLKSYISHIAEEMYIYRSLPLGQDRRHNRYWQFVASASCNDPGSGRIFVEYHDGKWRLIDSEEAFDTLLNSLDSRGIRESHLRLMLLKIENTFKENVQKNAKCAKIGNTNEIRVKNEADETDSSPDHHTSSDSPSSTICGLSSDTSETSSSFRIELGKSESDKKAALRRYQDFQKWMWKECYNPSILCATKYGKKRCKPQVDICDICLNLYCLEDSHCSHCHLTFPSNDGFSVSKHAIQCGDKLPKDICIPESPLPLRTRLLKALLAFIEVSVPPEAFQSIWTEDIRRFWGVKLSRSSSAEELLQILTLFERALNRDFLSSPFATTGDLLGMNTMSESAALTSMDLKSVTVLPWVPRTTSAVSLRLFEFDTSITYVKLEKPDPYQEREARYIKLPSRYAGVKSTKAVEPSYMDCDEFMKVKSAPMKIVRSSRKRARGNHDKGRAKNLSKRTNDSKRDNGLLNFEVTENLSQRLKQQGQGSQGHTGGRGRRTVRKRREENRVDDLLLSDRAAITSSNFSREPSRIMDEDWSDEKPSPIPREAADMSSSSEEDEYDDNTQPMESDDNVEAVEYGQGNWEIGFNGTPNRWNRNLVGMSDEEQHLEASEDDNDNGIEGNGEEEEEEEEEEDGSEADVIMSDDGMANRVVNEESSDSSDSEDYSD | 1770 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi5g04051 | 1770 | MobiDBLite | consensus disorder prediction | 1631 | 1648 | - | - | |
Vivi5g04051 | 1770 | PANTHER | HOMEOBOX-DDT DOMAIN PROTEIN RLT2 | 22 | 1770 | IPR044977 | GO:0006357 | |
Vivi5g04051 | 1770 | MobiDBLite | consensus disorder prediction | 21 | 47 | - | - | |
Vivi5g04051 | 1770 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Vivi5g04051 | 1770 | CDD | homeodomain | 43 | 98 | IPR001356 | GO:0003677 | |
Vivi5g04051 | 1770 | MobiDBLite | consensus disorder prediction | 1626 | 1770 | - | - | |
Vivi5g04051 | 1770 | Pfam | Williams-Beuren syndrome DDT (WSD), D-TOX E motif | 1127 | 1199 | IPR028941 | - | |
Vivi5g04051 | 1770 | MobiDBLite | consensus disorder prediction | 1657 | 1671 | - | - | |
Vivi5g04051 | 1770 | Pfam | HB1, ASXL, restriction endonuclease HTH domain | 743 | 811 | IPR007759 | GO:0006355 | |
Vivi5g04051 | 1770 | Gene3D | - | 25 | 101 | - | - | |
Vivi5g04051 | 1770 | MobiDBLite | consensus disorder prediction | 1537 | 1569 | - | - | |
Vivi5g04051 | 1770 | MobiDBLite | consensus disorder prediction | 1551 | 1567 | - | - | |
Vivi5g04051 | 1770 | MobiDBLite | consensus disorder prediction | 842 | 870 | - | - | |
Vivi5g04051 | 1770 | MobiDBLite | consensus disorder prediction | 1688 | 1702 | - | - | |
Vivi5g04051 | 1770 | ProSiteProfiles | DDT domain profile. | 561 | 620 | IPR018501 | - | |
Vivi5g04051 | 1770 | MobiDBLite | consensus disorder prediction | 1224 | 1256 | - | - | |
Vivi5g04051 | 1770 | MobiDBLite | consensus disorder prediction | 1582 | 1610 | - | - | |
Vivi5g04051 | 1770 | MobiDBLite | consensus disorder prediction | 369 | 387 | - | - | |
Vivi5g04051 | 1770 | MobiDBLite | consensus disorder prediction | 1710 | 1743 | - | - | |
Vivi5g04051 | 1770 | SUPERFAMILY | Homeodomain-like | 29 | 98 | IPR009057 | - | |
Vivi5g04051 | 1770 | Coils | Coil | 986 | 1006 | - | - | |
Vivi5g04051 | 1770 | ProSiteProfiles | 'Homeobox' domain profile. | 38 | 98 | IPR001356 | GO:0003677 | |
Vivi5g04051 | 1770 | MobiDBLite | consensus disorder prediction | 302 | 367 | - | - | |
Vivi5g04051 | 1770 | Pfam | Homeodomain | 41 | 97 | IPR001356 | GO:0003677 | |
Vivi5g04051 | 1770 | Pfam | DDT domain | 562 | 617 | IPR018501 | - | |
Vivi5g04051 | 1770 | MobiDBLite | consensus disorder prediction | 842 | 864 | - | - | |
Vivi5g04051 | 1770 | SMART | testlast3 | 561 | 620 | IPR018501 | - | |
Vivi5g04051 | 1770 | Coils | Coil | 397 | 488 | - | - | |
Vivi5g04051 | 1770 | MobiDBLite | consensus disorder prediction | 1238 | 1256 | - | - | |
Vivi5g04051 | 1770 | MobiDBLite | consensus disorder prediction | 405 | 427 | - | - | |
Vivi5g04051 | 1770 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
Vivi5g04051 | 1770 | MobiDBLite | consensus disorder prediction | 95 | 154 | - | - | |
Vivi5g04051 | 1770 | SMART | HOX_1 | 40 | 102 | IPR001356 | GO:0003677 | |
Vivi5g04051 | 1770 | MobiDBLite | consensus disorder prediction | 458 | 482 | - | - | |
Vivi5g04051 | 1770 | MobiDBLite | consensus disorder prediction | 272 | 387 | - | - | |
Vivi5g04051 | 1770 | Pfam | WSTF, HB1, Itc1p, MBD9 motif 1 | 947 | 990 | IPR028942 | - | |
Vivi5g04051 | 1770 | ProSiteProfiles | HARE-type HTH domain profile. | 743 | 812 | IPR007759 | GO:0006355 | |
Vivi5g04051 | 1770 | MobiDBLite | consensus disorder prediction | 434 | 453 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi5g04051 | Vivi-Chr5 | 136556134 | 136565923 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi5g04051 | 35 | 1695 | Homeobox Transcription Factor Family | AT1G28420 | 48.458 | 0.0 | 1323 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-other | Vivi5g04051 | WSD | 1.2e-15 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi5g04051 | - | - | gmx:100818817 | 2238.77 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vivi5g04051 | 5 | 136556134 | 136565923 | Vivi5g04051 | 5 | 136556134 | 136565923 | ECH | |
Vivi5g04051 | 5 | 136556134 | 136565923 | Vivi5g03348 | 5 | 124511394 | 124526188 | PCT |