Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04049 ATGGAGTCACGAGTGCTGTCACGCGCCACCACTCTCTCCTCCCTCCCCACTCTCAACAAACTCCATCGGGTTCCTCTCCCCAATGCTTCCCTCCTCCCCGTGAAATCGATCGGATCAGTCTCCGATGGCGGGAACCTCGTCTGGGGAAGACAACTTCGTCCCGAGCTCTGTTCTCCGGTGCTTAAGAAAGGTGCTTCACTCCTCCGTCCTTGTCTCGCCACTGCAGAAGGAAACGACTCCGCCGGTGAAGAGAAGGTAGCTCCGGTTGGATTCTTCAGCCGGTATCCAGCTCTTACTACCGGTTTTTTCTTCTTCACTTGGTACTTCTTGAATGTTATTTTCAACATCCTCAACAAGAAGATCTATAACTATTTCCCATATCCTTACTTCGTGTCGGTAATTCATTTAGCCGTGGGAGTGGTGTATTGTTTGGTGAGCTGGACCGTGGGCCTTCCTAAGCGCGCTCCTATTGACGGTAACCTGCTGAAGTTGCTGATTCCTGTAGCTGTGTGTCATGCATTAGGCCATGTCACTAGCAATGTCTCATTTGCAGCAGTTGCTGTTTCTTTCACACATACCGTTAAAGCTCTTGAGCCATTCTTTAATGCTGCTGCCTCACAATTTATACTTGGACAATCAATTCCCATCACTCTATGGCTTTCATTGGCTCCTGTCGTTATCGGTGTGTCAATGGCATCATTGACTGAACTCTCATTCAACTGGCTTGGCTTCATAAGTGCTATGATTTCAAACATTTCCTTTACATACAGGAGTATCTATTCAAAGAAAGCCATGACTGATATGGATAGTACCAATATCTATGCATACATTTCAATCATTGCTCTAATTGTCTGCATACCACCGGCCTTAATTATTGAAGGGCCTACACTGTTGAAGACCGGTTTCAATGATGCAATAGCTCAAGTTGGTTTGGTTAAGTTTGTATCAGATCTCTTCTGGGTTGGTATGTTTTACCATCTCTACAACCAGGTGGCCACTAACACATTGGAGAGAGTGGCTCCTCTTACTCATGCCGTTGGCAACGTACTCAAACGTGTATTCGTCATTGGATTTTCGATCATTATCTTCGGTAACAAGATTTCCACCCAAACTGGCATTGGAACCGGCATTGCAATTGCTGGAGTAGCACTCTACTCTTTCATCAAAGCCAAGATCGAAGAAGAGAAGCGACAAGCAAAAGCAGCTTAA 1209 0.4591 MESRVLSRATTLSSLPTLNKLHRVPLPNASLLPVKSIGSVSDGGNLVWGRQLRPELCSPVLKKGASLLRPCLATAEGNDSAGEEKVAPVGFFSRYPALTTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWTVGLPKRAPIDGNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPPALIIEGPTLLKTGFNDAIAQVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTGIAIAGVALYSFIKAKIEEEKRQAKAA 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04049 402 Pfam Triose-phosphate Transporter family 99 386 IPR004853 -
Vivi5g04049 402 PANTHER SOLUTE CARRIER FAMILY 35 100 393 - -
Vivi5g04049 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 143 235 - -
Vivi5g04049 402 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 98 396 IPR004696 GO:0016020|GO:0022857|GO:0055085
Vivi5g04049 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 318 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04049 Vivi-Chr5 136543282 136546440 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04049 1 400 Antiporters AT5G46110 77.129 0.0 620
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04049 5 136543282 136546440 Vivi5g04049 5 136543282 136546440 ECH