Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04046 ATGGAAGAAAAACAAAAACCATTGTTAATGTTTTGCATTGTTCTTCTGTCAATGCTATCTCTATCAACAAACGTAACATGTCTGAACCAAGATGGGCTCTACCTGTACCAATTCAAACTCACCTTAGACGATCCCGACTCCTCTCTCTCTTCCTGGAACCCAACAGACACCACACCATGCAACTGGTTCGGCGTCCGCTGCGACGCCACCAACACCACCGTAACAGAACTCGACCTCTCCGACACCAACATCCAAGGCCCATTCACAGCCTCAATCCTCTGCCGTCTCCCCAACCTCTCCTCCATCAACCTCTTCAACAACTCCATTAACCAAACCTTCCCCCTCCAAATCTCCCTCTGTAAAAACCTCCTCCACCTTGACCTCTCCCAGAATCTCCTCACTGGCCCCCTCCCGGAATCTCTCTCCTCTCTCCCTAACCTCCGTTACCTCGACCTCACCGGAAACAACTTCTCCGGTAACATACCTATCTCCTTTGGTACATTCCAGAAACTCGAAGTACTCTCACTCGTGTCGAATCTTCTGGAAGGTACCATTCCTCCGTCTCTTGGAAACATCACTACTTTGAAAATGCTTAACCTCTCTTACAACCCGTTTTTCCCGGGTCGGATCCCGTTGGAGCTTGGAAACTTAACGAACCTCGAGGTTCTATGGTTGACGCAATGCAACCTTGTTGGTGTGATTCCTGAAACTCTCGGGAAGTTGAAGAAGCTTAAGGATTTGGACCTTGCGTTGAATGATCTTTATGGCTCTATACCGAGTTCGCTCACTGAGTTAACGAGTTTGAGACAGATTGAGTTGTATAATAACTCGTTATCCGGTGAGTTGCCGAGGGGAATGGGGAAACTTACTAATTTGAGGCTTCTTGACGCGTCGATGAATCATTTGACGGGGAGGATTCCGGAGGAGCTTTGTTCGTTGCCGTTGGAGAGTTTGAATCTCTATGAGAATCGTTTTGAGGGTGAGTTACCGGCGAGTATAGCTGACTCACCGAATCTTTATGAGTTGAGGTTGTTTGGGAACAGGCTTACCGGGAAGTTGCCGGAGAATCTCGGGAAACGTTCTCCTCTGAGGTGGCTTGATGTTTCCAGTAACCAGTTTTGGGGAAGTATTCCGGCGAGTTTGTGTGATCTTGGTGAGTTGGAGGAGCTTTTGATGATATATAATTTGTTCACCGGTGAGATTCCGGCGAGTTTGGGGACGTGTCAGAGCTTGTCGCGTGTGCGTTTGGGTTATAACAGATTCTCCGGTGAGGTTCCGGCGGGGATCTGGGGTCTTCCTCATGTGTATCTTCTCGAACTTGCTCAAAACTCGTTTTCCGGTTCCATTTCGAAGACCATTGCCGGAGCAGGGAACCTTTCCTTGTTGATTTTATCGAAAAACAACTTCTCGGGAACTGTTCCCGATGAGGTTGGGTGGTTGGAAAATCTCGTCCAGTTTTCTGCCGCTGATAACATGTTCAGTGGCTCACTTCCCGACAGTTTGGTCAATCTTGGGCAGCTTGGGATTCTTGATTTTCACAACAACAGGCTCTCTGGGGAACTACCAAAGGGGATTCATTCTTGGAAAAAGCTCAATGATTTGAATTTGGCCAACAATGAGATTGTTGGGAAGATTCCTGATGAGATTGCTAGCTTATCTGTACTTAATTTTCTTGATCTTTCGCATAATCAGTTTTCAGGAAAAATCCCTCATGGGTTGCAGAATATGAAGCTCAATCAGCTGAATTTTTCGTATAATCGTCTTTCGGGTGAACTTCCTCCTCAGTTGGCTAAGGAAATGTACCAGTCTAGTTTCTTGGGTAATCCTGGCCTGTGTGGAGATTTGAAAGGTTTGTGCGATGGTAGGAATGAAGTGAAGAATTTGGGTTATGTTTGGTTGCTTCGAGCGATCTTTCTTCTCGCCGTTTTGGTGTTCCTTGTGGGTGTTGTCTGGTTCTATTTTAGGTACAAGAATTTCAAGGAATCGAGAAGGGCCATTGATAAATCAAAATGGACTTTAATGTCGTTCCATAAGCTTGGTTTTGGGGAAGACGAGATTTTGAATTGTCTTGATGAAGATAATGTCATTGGAAGTGGCTCTTCAGGAAAGGTTTACAAGGTTGTACTTAACAGCGGGGAAGCTGTTGCGGTGAAGAAGATATGGGGAGGTGCCAGAAAGGAAGTGGAGAGTGGTGATGTTGAGAAGGGGAGGGTTCAAGACAATGCTTTTGATGCAGAGGTTGAAACTTTGGGAAAAATCAGACACAAGAACATTGTTAAGCTATGGTGTTGCTGTACTACTAGGGATTGCCAGCTTTTGGTTTACGAGTATATGCAAAACGGTAGTCTTGGTGATTTACTTCATAGCAGTAAAGGAGGGTTGTTGGAATGGCCAACAAGATACAAGATAGCTGTGGATGCTGCAGACGGACTCTCTTATCTCCATCATGACTGTGTTCCCCCAATTGTTCACAGAGATGTTAAATCTAACAATATCTTGTTGGATGGAGACTTTGGTGCAAAGGTGGCTGATTTCGGGTTAGCTAAGGTTGTTGAAACCACAGGGAAAGGAATTAAATCCATGTCCGTCATTGCTGGTTCTTGTGGCTATATTGCGCCAGAATATGCATACACGCTTAGAGTGAACGAGAAGAGCGACATTTATAGTTTTGGTGTTGTTATACTTGAATTGGTTACTGGAAGACGGCCTGTGGATCCTGAATTTGGGGAGAAAGATTTGGTTAAATGGGTTTGCACTACATTGGATCAGAAAGGCGTGGACCATGTAATTGACTCGAGGCTTGATTCGTGTTTCAAAGAAGAAATTTGCAAGGTTTTCAACATTGGCCTAATGTGCACTAGTCCTCTTCCAATCAACCGGCCTTCCATGAGAAGAGTAGTGAAGATGTTGCAAGAGGTAGGAATAGAGAACCAAATGAAACCTGCCAAGAAAGATGGAAAATTAACCCCTTATTACTATGATGATGCCTCAGATCATGGAAGTGTTGTTTGA 3012 0.4505 MEEKQKPLLMFCIVLLSMLSLSTNVTCLNQDGLYLYQFKLTLDDPDSSLSSWNPTDTTPCNWFGVRCDATNTTVTELDLSDTNIQGPFTASILCRLPNLSSINLFNNSINQTFPLQISLCKNLLHLDLSQNLLTGPLPESLSSLPNLRYLDLTGNNFSGNIPISFGTFQKLEVLSLVSNLLEGTIPPSLGNITTLKMLNLSYNPFFPGRIPLELGNLTNLEVLWLTQCNLVGVIPETLGKLKKLKDLDLALNDLYGSIPSSLTELTSLRQIELYNNSLSGELPRGMGKLTNLRLLDASMNHLTGRIPEELCSLPLESLNLYENRFEGELPASIADSPNLYELRLFGNRLTGKLPENLGKRSPLRWLDVSSNQFWGSIPASLCDLGELEELLMIYNLFTGEIPASLGTCQSLSRVRLGYNRFSGEVPAGIWGLPHVYLLELAQNSFSGSISKTIAGAGNLSLLILSKNNFSGTVPDEVGWLENLVQFSAADNMFSGSLPDSLVNLGQLGILDFHNNRLSGELPKGIHSWKKLNDLNLANNEIVGKIPDEIASLSVLNFLDLSHNQFSGKIPHGLQNMKLNQLNFSYNRLSGELPPQLAKEMYQSSFLGNPGLCGDLKGLCDGRNEVKNLGYVWLLRAIFLLAVLVFLVGVVWFYFRYKNFKESRRAIDKSKWTLMSFHKLGFGEDEILNCLDEDNVIGSGSSGKVYKVVLNSGEAVAVKKIWGGARKEVESGDVEKGRVQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCQLLVYEYMQNGSLGDLLHSSKGGLLEWPTRYKIAVDAADGLSYLHHDCVPPIVHRDVKSNNILLDGDFGAKVADFGLAKVVETTGKGIKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRRPVDPEFGEKDLVKWVCTTLDQKGVDHVIDSRLDSCFKEEICKVFNIGLMCTSPLPINRPSMRRVVKMLQEVGIENQMKPAKKDGKLTPYYYDDASDHGSVV 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04046 1003 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Vivi5g04046 1003 Pfam Leucine rich repeat 97 157 IPR001611 GO:0005515
Vivi5g04046 1003 SUPERFAMILY Protein kinase-like (PK-like) 686 971 IPR011009 -
Vivi5g04046 1003 SUPERFAMILY RNI-like 223 581 - -
Vivi5g04046 1003 FunFam Receptor-like protein kinase HSL1 314 621 - -
Vivi5g04046 1003 FunFam Leucine-rich receptor-like protein kinase family protein 210 308 - -
Vivi5g04046 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 822 834 IPR008271 GO:0004672|GO:0006468
Vivi5g04046 1003 SUPERFAMILY L domain-like 51 313 - -
Vivi5g04046 1003 FunFam Receptor-like protein kinase HSL1 674 777 - -
Vivi5g04046 1003 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 778 987 - -
Vivi5g04046 1003 Gene3D Transferase(Phosphotransferase) domain 1 778 994 - -
Vivi5g04046 1003 SMART LRR_typ_2 384 408 IPR003591 -
Vivi5g04046 1003 SMART LRR_typ_2 217 240 IPR003591 -
Vivi5g04046 1003 SMART LRR_typ_2 96 120 IPR003591 -
Vivi5g04046 1003 SMART LRR_typ_2 265 288 IPR003591 -
Vivi5g04046 1003 SMART LRR_typ_2 289 313 IPR003591 -
Vivi5g04046 1003 SMART LRR_typ_2 552 575 IPR003591 -
Vivi5g04046 1003 SMART LRR_typ_2 144 170 IPR003591 -
Vivi5g04046 1003 SMART LRR_typ_2 504 527 IPR003591 -
Vivi5g04046 1003 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 28 192 - -
Vivi5g04046 1003 ProSitePatterns Protein kinases ATP-binding region signature. 696 719 IPR017441 GO:0005524
Vivi5g04046 1003 Pfam Protein kinase domain 692 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g04046 1003 Gene3D Ribonuclease Inhibitor 28 185 IPR032675 -
Vivi5g04046 1003 SMART serkin_6 690 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g04046 1003 ProSiteProfiles Protein kinase domain profile. 690 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g04046 1003 Gene3D Ribonuclease Inhibitor 186 334 IPR032675 -
Vivi5g04046 1003 Gene3D Ribonuclease Inhibitor 335 622 IPR032675 -
Vivi5g04046 1003 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 237 972 - -
Vivi5g04046 1003 Gene3D Phosphorylase Kinase; domain 1 674 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04046 Vivi-Chr5 136448807 136452719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04046 25 1003 Receptor kinase-like Gene Family AT1G28440 71.298 0.0 1436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi5g04046 Pkinase 3.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04046 - - gmx:100819887 1683.31