Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04031 ATGGATTTCAATACAAACGGTTCTGAAGAAAGTGAACTGTATCATGCTCAAATTCATTTATACAAACATGTATACAACTTTGTAAGTTCCATGGCACTCAAATCTGCTATGGAACTAGGTATAGCTGATGCAATCCATAACCATGGAAAACCAATGACTCTTTCTGAATTAGCTTCATCTTTGAAACTTCACACTTCTAAAGTTAACATCCTTTATCGGTTTTTGCGTCTGCTAACACACAATGGTTTCTTTGCTAAAACAACACTGAAAAGCAACGAAGCAGAAGAAGAAGAAACAGCTTATATTCTCACACCTTCTTCAAAGCTTCTTATAACTGGTAAACCAACATGTTTATCATCACTGGTTAAAGGAGCACTTCATCCAAGTTCTCTAGACATGTGGAGCGTTTCAGAGAAATGGTTCCATGAGGATAAGGAACAGACACTGTTTGAGTGTGCGACCGGGGAGAGTTATTGGGATTTTCTTAACAAGGATTCTGAATCTGATACTTTGAGTATGTTTCAAGATGCTATGGCGGCAGATTCGAGATTTTTCAAGCTTGCTCTTCAAGAAAATAAGCATGTGTTTGAGGGTTTGGAGTCTTTGGTTGATGTGGCAGGTGGAACTGGTGGTGTTGCAAAACTCATTCATGAAGCGTTTCCTCACATCAAATGCACTGTTTTTGATCAGCCACAGGTTGTTGGTAACTTAACCGGAAATGAAAATTTGAAGTTTGTTGGTGGAGATATGTTCAAATCTGTCCCTTCAGCTGATGCTGTTTTACTCAAGTGGGTTTTGCATGATTGGAATGATGAACTATCTTTAAAGATATTGAAGAACAGTAAAGAAGCTATTTCACACAAAGGGAAAGAAGGAAAAGTGATTATCATTGACATATCAATAGATGAAAAAAGTGATGATCATGGATTAACTGAGTTGCAATTGGAGTATGATTTGGTGATGCTTACAATGTTTCTTGGTAAGGAAAGAACAAAGAAAGAATGGGAGAAACTGATATATGATGCAGGTTTTAGTAGCTACAAAATTACTCCTATATGTGGCTTCAAGTCTCTCATTGAAGTTTATCCTTAG 1092 0.3709 MDFNTNGSEESELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHTSKVNILYRFLRLLTHNGFFAKTTLKSNEAEEEETAYILTPSSKLLITGKPTCLSSLVKGALHPSSLDMWSVSEKWFHEDKEQTLFECATGESYWDFLNKDSESDTLSMFQDAMAADSRFFKLALQENKHVFEGLESLVDVAGGTGGVAKLIHEAFPHIKCTVFDQPQVVGNLTGNENLKFVGGDMFKSVPSADAVLLKWVLHDWNDELSLKILKNSKEAISHKGKEGKVIIIDISIDEKSDDHGLTELQLEYDLVMLTMFLGKERTKKEWEKLIYDAGFSSYKITPICGFKSLIEVYP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04031 363 Gene3D - 2 110 IPR036388 -
Vivi5g04031 363 Gene3D Vaccinia Virus protein VP39 111 363 IPR029063 -
Vivi5g04031 363 PANTHER O-METHYLTRANSFERASE 15 348 IPR016461 GO:0008168
Vivi5g04031 363 Pfam O-methyltransferase domain 136 345 IPR001077 GO:0008171
Vivi5g04031 363 SUPERFAMILY "Winged helix" DNA-binding domain 10 114 IPR036390 -
Vivi5g04031 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 363 IPR016461 GO:0008168
Vivi5g04031 363 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Vivi5g04031 363 FunFam O-methyltransferase ZRP4 113 363 - -
Vivi5g04031 363 FunFam Coniferyl alcohol 9-O-methyltransferase 3 110 - -
Vivi5g04031 363 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Vivi5g04031 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 362 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04031 Vivi-Chr5 136248494 136249769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04031 28 350 Monolignol Biosynthesis Gene Families AT5G54160 33.636 4.29e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04031 K22588 - ag:AAC49856 675.626