Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04030 ATGTTGGTTGAACTTGCACTTGCTTTGTTGGTGATTGCTCTCTTTATACACTTGCGTCCAACACCCACTGCTAAATCAAAGGCACTACGCCACCTTCCTAATCCTCCAAGTCCTAAACTTCGTCTTCCTTTCATTGGTCATCTTCACCTTTTGGATAATCCTCTTCTTCACCACTCTCTCATCCGTCTAGGAGAAACTTATGGCCCTTTATACTCTCTTTACTTCGGCTCCATGCCTACCGTTGTTGTATCCACTCCCGATCTCTTCAAACTCTTCCTTCAAACTCATGAAGCGACTTCCTTCAACACAAGGTTCCAAACCTCCGCTATTAGACGGTTAACCTACGATAACTCCGTTGCTATGGTTCCCTTTGGACCTTACTGGAAGTTCATTCGAAAGCTTATCATGAATGATCTCCTTAACGCCACCACCATCAACAAGTTGAGACCCTTGAGGACTAGAGAAATCCGCAAGGTTCTTAAGGTTATGGCCCGTAGCGCTGAAACTCAAGAGCCACTTAATGTCACTGAGGAGCTTCTCAAGTGGACAAACAGCACAATCTCTACATTGTTATTGGGTGAGGCTGAAGAGGTTAGAGATATTGCTCGCGACGTTCTTAAGATCTTTGGGGAGTATAGTCTTACCGACTTTATTTGGCCTTTGAATAAGTTAAAGCTTGGGAACTATGAGAAGAGAATTGATGATATTTTCAATAAATATGATCCTATCATTGAAAAAGTTATCAAGAAAAGACAAGAGATTGTGAATAAAAGAAAAGAGAGAAATGGAGAAATCGAAGAAGGGGAGCAAAGTGTAGTTTTTCTTGATACTTTGCTTGAATTTGCTCAAGATGAGACAATGGAGATCAAAATTACAAAGGAACAAATCAAGGGTCTTGTTGTGGATTTTTTCTCTGCTGGGACAGACTCCACGGCAGTGTCAACAGAATGGACTTTAGCAGAACTCATCAACAATCCAAAGGTGTTGAAGAAAGCTCGAGAGGAGATTGATTCTGTTGTAGGAAAAGATAGGCTTGTTGACGAGTCGGATGTTCAGAATCTTCCTTACCTAAGAGCCATAGTGAAGGAGGCATTCCGCATGCACCCGCCACTACCTGTGTTCAAGAGAAAATGTAGTCAAGAATGTGAGATCAATGGATATGTGATCCCTGAGGGAGCATTGATGCTTTTCAATGTATGGGCAGTTGGAAGAGACCCTAAATATTGGAAAAGGCCATTAGAATTCCGTCCTGAGAGGTTCTTAGAGAATGTTGTTGGTGAAGGTGAAGCAGCTTCAGTTGATCTGAAGGGTCAGGATTTCCAACTTTTACCATTTGGGTCTGGAAGGAGGATGTGTCCTGGAGTCAATTTGGCTACTGCTGGAATGGCAACACTGCTTGCATCTATTATCCAATGCTTTGATCTACAAGTACTAGATCCACATGGGAAAATATTGAAAGGTGATGATGCTAAGGTTAGCATGAAAGAGAGAGCTGGTCTCACGGTTCCAAGGGCTCATAATCTCGTATGTGTTCCCCTTGCAAGAGAGGATGTTGCAGCTAAACTACTTTCTTCTTAA 1578 0.4233 MLVELALALLVIALFIHLRPTPTAKSKALRHLPNPPSPKLRLPFIGHLHLLDNPLLHHSLIRLGETYGPLYSLYFGSMPTVVVSTPDLFKLFLQTHEATSFNTRFQTSAIRRLTYDNSVAMVPFGPYWKFIRKLIMNDLLNATTINKLRPLRTREIRKVLKVMARSAETQEPLNVTEELLKWTNSTISTLLLGEAEEVRDIARDVLKIFGEYSLTDFIWPLNKLKLGNYEKRIDDIFNKYDPIIEKVIKKRQEIVNKRKERNGEIEEGEQSVVFLDTLLEFAQDETMEIKITKEQIKGLVVDFFSAGTDSTAVSTEWTLAELINNPKVLKKAREEIDSVVGKDRLVDESDVQNLPYLRAIVKEAFRMHPPLPVFKRKCSQECEINGYVIPEGALMLFNVWAVGRDPKYWKRPLEFRPERFLENVVGEGEAASVDLKGQDFQLLPFGSGRRMCPGVNLATAGMATLLASIIQCFDLQVLDPHGKILKGDDAKVSMKERAGLTVPRAHNLVCVPLAREDVAAKLLSS 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04030 525 Gene3D Cytochrome P450 24 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04030 525 Pfam Cytochrome P450 35 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04030 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Vivi5g04030 525 PANTHER STEROID 21-HYDROXYLASE-RELATED 11 505 - -
Vivi5g04030 525 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04030 525 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04030 525 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04030 525 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04030 525 CDD CYP93 68 512 - -
Vivi5g04030 525 SUPERFAMILY Cytochrome P450 29 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04030 525 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04030 525 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04030 525 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04030 525 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04030 525 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04030 525 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g04030 525 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04030 Vivi-Chr5 136242033 136243898 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g04030 1 516 Cytochrome P450 AT5G06900 36.053 1.36e-111 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04030 - - ag:BAA76380 885.56