LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi5g04023	ATGAAGAAGATTTCGAAGAGCAGCTGCAAATCTGCATCGCACCGGCTTTTTAAGGACAAGGCGAAGAATCGCGTTGATGACCTGCAGCTGACATTCATGGATTTGCAGTTTGCTAGGAAGGAGAGCCGAACTGTTGATGCTGCGGTTCTGGAGGAACAAGTGCATCAGATGCTTCGTGAGTGGAAGGCTGAACTGAACGAACCTTCTCCTGCTTCTTCTTTGCAGCAAGGTGGAAGTCTTGGGTCATTCTCCACCGATATCTGTCGGCTTTTGCAGCTCTGTGAGGAAGAAGATGATGCCTCTAGTCCATTAGCTGCACCTAAACCTGAACCTAATGATCAGGCTCTTCAGGCGGGGGATAAAGTCATTTTTCAAGCGGGCCAGCAGCAACATGATTTCCCGTTGGTTGATGAGCGCAAGCAGTCAACCTCAGGAGTTCAAGCCGTGGCAACTAACATTCAGGATGGGCCTGCTTTAGAATATCACCAGTTTGATTTGCATCCAGACTTTGATCACAGCTTATATACTGGTTTCAATGGTACAGGTTATTCTGAGGAGGAAGCTATTCCTCATATATCTAGCTATCTACCAAGTACATGCCCTCCTCCTTCTGCTTTCTTGGGCCCAAAATGTGCACTTTGGGACTGTCCGAGGCCTGCACAAGGGTTGGACTGGTGTCAAGATTATTGCAGTAGCTTTCATGCTGCTCTAGCTTTGAACGAAGGGCCACCAGGCATGGCCCCAGTTCTTCGACCTGGGGGCATTGGTTTAAAGGATAATTTACTCTTTTCTGCTCTTAGTGCAAAGGCACAAGGAAAAGATGTTGGCATCCCAGAGTGTGAGGGAGCAGCAACTGCTAAGTCTCCATGGAATGCACCTGAGCTCTTTGATCTTTCTGTTCTTGAGGGCGAGACTATTAGGGAATGGCTTTTCTTCGATAAGCCTCGAAGAGCATTTGAAAGTGGAAACAGAAAGCAGAGGTCATTACCAGATTACAGTGGGCGTGGTTGGCATGAATCTAGAAAGCAAGTTATCAATGAATTTGGAGGTCTGAAGAGATCCTATTATATGGATCCACAACCTCTGAACCATTTTGAATGGCACCTCTACGAATATGAGATTAGCAAATGTGATGTATGTGCCTTGTACCGTTTAGAACTAAAACTTGTTGATGGGAAGAAGAACTCCAAGGCAAAAATAGCAAATGATTCAGTTGCTGATTTGCAGAAACAGATGGTAAAGCTCTCTGCTGAGTTTCCGCCTGATAACAAAAGGCCGGCCAAAGGCAGAGCCAAGATTAATGCCAAAGTTGGCATGGCTACTGTCTATCCAGCTTCACACAGAGTGACCCCTCTAAATGGAACATACGAATATGGGTTAGCTGCACCATACGACTATCTTGCTGAGAACATGGGCGATTATTATGGGACATGA	1434	0.4609	MKKISKSSCKSASHRLFKDKAKNRVDDLQLTFMDLQFARKESRTVDAAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDASSPLAAPKPEPNDQALQAGDKVIFQAGQQQHDFPLVDERKQSTSGVQAVATNIQDGPALEYHQFDLHPDFDHSLYTGFNGTGYSEEEAIPHISSYLPSTCPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFSALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVINEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDVCALYRLELKLVDGKKNSKAKIANDSVADLQKQMVKLSAEFPPDNKRPAKGRAKINAKVGMATVYPASHRVTPLNGTYEYGLAAPYDYLAENMGDYYGT	477

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi5g04023	477	PANTHER	TRANSCRIPTION FACTOR VOZ1	1	472	IPR039277	GO:0006355\|GO:0048578
	Vivi5g04023	477	Coils	Coil	398	418	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi5g04023	Vivi-Chr5	136153896	136159413	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi5g04023	3	475	VOZ-9 Transcription Factor Family	AT1G28520	69.043	0.0	679

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	VOZ	Vivi5g04023		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi5g04023	-		-	gmx:100798565	892.878