Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03951 ATGGGGGGTTGCACTTCGAAGCCGCAGAAACCCAACCCATATGCCGTTAGAGAAACGGAAGCTGACCCAACGCAAATCCCGAAGACCCCGTTAAGTCCCGTCGCCGATGGTCATGGCCGGAAAGATAAAGATGACGTCGTCGCCGGGAAAAAGTCTCCGTTTTTTCCGTTTTACAGTCCGAGCCCGGCTCGTTTCTTTAAGAAGTCTCCTTCAACGCCGAGCCGGAGTACGAGCTCGACGCCGAGGAGATTCTTCCGGCGACCTTTTCCTCCGCCTTCTCCGGCGAAGCATATAAGAGCTGTGTTGGCTCGGAGACAGGGGAAGAAGGAAACTGCGGCGATACCGGAAGATACGGAGGAGGGTGGAGGGGATTTGGACAAGAGATTTGGATTTTCGAAGGATTTTACTAGTAAGTTGGAGGTTGGAGAAGAAGTGGGTAGAGGGCATTTTGGGTATACTTGTTCTGCTAAGTTTAAGAAGGGTGAGCATAAGGGTCAACAAGTAGCTGTGAAAGTCATTCCTAAAGCAAAGATGACAACAGCAATTGCAATTGAAGATGTAAGAAGGGAGGTGAAAATATTGCGAGCTTTGAACGGGCACAGCAATTTGGTACAATTCTATGATTCATTTGAAGACCAAGAAAATGTCTACATTGTCATGGAGTTATGTGAAGGAGGAGAGCTATTAGATATGATATTATCAAGAGGAGGGAAATACTCAGAAGATGATGCAAAGGCTGTCATGGTACAAATACTAAACGTTGTTGCATTTTGTCATCTTCAGGGTGTGGTGCATCGTGATCTTAAGCCTGAGAATTTTTTATACACTTCCAAAGATGAAAGTTCCGAGTTAAAAGCTATAGACTTTGGATTATCAGATTTTGTCAGACCAGATGAGAGGCTTAATGACATTGTTGGAAGTGCTTATTATGTGGCTCCTGAAGTTCTTCATAGATCTTACAGCACAGAAGCTGATGTGTGGAGTATAGGTGTGATAGCATATATTCTATTATGTGGTAGTCGTCCGTTTTGGGCTAGAACAGAGTCGGGTATTTTTAGGGCAGTTTTGAAAGCTGATCCAGGCTTTGAAGAAGCTCCTTGGCCATCCTTATCTTCAGAAGCAAAAGATTTTGTCAAACGCCTACTGAATAAGGACCCACGGAAACGAATATCTGCTGCTCAGGCACTGAGTCATCCTTGGATACGTAATTACAATGATGTAAAAGTTCCACTTGATATTTTAATATTCAAGCTTATGAAGACTTATATGAGATCATCATCTCTGCGCAAAGCTGCCTTAAGGGCCTTGTCAAAGACATTAACTGCCGATGAACTCTATTATCTGAGAGAGCAGTTTGCACTGTTGGAACCAAGCAAAAACGGCAGCATATCCTTGGAGAACATTAACAAGGCCTTAAAGAAATATGCAACTGATGCCATGAAAGAGTCCCGTATCACTGATTTTCTTTCCTCGCTGACTTCATTACAATATAGAAGGATGGATTTTGAAGAATTTTGTGCCGCTGCATTAAGTGTGCATCAACTCGAAGCTCTTGATCGTTGGGAGCAACATGCCCGCTGTGCATATGAACTTTTTGAGAAAGACGGAAATAGGGCTATTGTCATTGAAGAACTTGCTTCAGAACTTGGACTTGGTCCTTCAATCCCTGTTCACGTTGTTCTTCATGACTGGATACGCCACACCGATGGGAAGTTAAGCTTTCTCGGGTTTGTTAAATTATTGCATGGTGTATCTAGCCGAAGTATTGCAAAGGTCCAGTAA 1782 0.436 MGGCTSKPQKPNPYAVRETEADPTQIPKTPLSPVADGHGRKDKDDVVAGKKSPFFPFYSPSPARFFKKSPSTPSRSTSSTPRRFFRRPFPPPSPAKHIRAVLARRQGKKETAAIPEDTEEGGGDLDKRFGFSKDFTSKLEVGEEVGRGHFGYTCSAKFKKGEHKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALNGHSNLVQFYDSFEDQENVYIVMELCEGGELLDMILSRGGKYSEDDAKAVMVQILNVVAFCHLQGVVHRDLKPENFLYTSKDESSELKAIDFGLSDFVRPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPGFEEAPWPSLSSEAKDFVKRLLNKDPRKRISAAQALSHPWIRNYNDVKVPLDILIFKLMKTYMRSSSLRKAALRALSKTLTADELYYLREQFALLEPSKNGSISLENINKALKKYATDAMKESRITDFLSSLTSLQYRRMDFEEFCAAALSVHQLEALDRWEQHARCAYELFEKDGNRAIVIEELASELGLGPSIPVHVVLHDWIRHTDGKLSFLGFVKLLHGVSSRSIAKVQ 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03951 593 FunFam CDPK-related kinase 1 132 227 - -
Vivi5g03951 593 Gene3D Phosphorylase Kinase; domain 1 141 227 - -
Vivi5g03951 593 Gene3D - 426 580 - -
Vivi5g03951 593 FunFam Calcium-dependent protein kinase SK5 311 406 - -
Vivi5g03951 593 CDD STKc_CAMK 140 400 - -
Vivi5g03951 593 SUPERFAMILY EF-hand 432 582 IPR011992 -
Vivi5g03951 593 FunFam CDPK-related kinase 3 131 303 - -
Vivi5g03951 593 FunFam CDPK-related kinase 1 437 510 - -
Vivi5g03951 593 Gene3D - 419 510 - -
Vivi5g03951 593 Gene3D Transferase(Phosphotransferase) domain 1 228 413 - -
Vivi5g03951 593 MobiDBLite consensus disorder prediction 65 83 - -
Vivi5g03951 593 ProSitePatterns Protein kinases ATP-binding region signature. 145 171 IPR017441 GO:0005524
Vivi5g03951 593 MobiDBLite consensus disorder prediction 35 49 - -
Vivi5g03951 593 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Vivi5g03951 593 PANTHER SERINE/THREONINE-PROTEIN KINASE 123 568 - -
Vivi5g03951 593 SMART serkin_6 139 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g03951 593 ProSiteProfiles Protein kinase domain profile. 139 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g03951 593 MobiDBLite consensus disorder prediction 1 125 - -
Vivi5g03951 593 MobiDBLite consensus disorder prediction 104 125 - -
Vivi5g03951 593 SUPERFAMILY Protein kinase-like (PK-like) 135 437 IPR011009 -
Vivi5g03951 593 Pfam Protein kinase domain 140 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03951 Vivi-Chr5 135102781 135107569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03951 1 589 EF-hand Containing Proteins AT3G50530 73.312 0.0 934
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Vivi5g03951 Pkinase 9.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03951 K13412 - gmx:100798913 1043.11