Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03903 ATGAACTTTGCTTGGGATGCAATGAGTGTGAAGCCATCTGGAAATGTTAATCTAGCGAGGCAGTCTTCGGTATACTCGTTGACTTTTGATGAGTTACAGAGTACAATTGGTGGAGTTGGAAAAGATTTTGGATCGATGAACATGGATGAACTCTTGAAAAACATATGGAATGTTGAAGAGACTCAGGCGTTGACATCAACGGCCGGTGGAGGAGGAGTAGGAGTAGGAGGAGAAGGACCGAACAACGCAATTGGTAGTAATTTGCAAAGACAAAGTTCCTTGACTTTGCCAAGGACACTTAGTCAGAGAAAAGTTGATGAGGTTTGGAAGGAATTGATGAAAGATAATGGAGATAGTGGTTCATCTATGCCTCAGAGACAACCAACATTAGGTGAAGTGACTTTGGAAGAGTTTTTGGTGAGAGCTGGTGTTGTGAAAGAAGATGTGCCTAATCATTCTCAACAAATTGAAAGACCAAATAATAATGAATGGTTTAGTGACTTCTCTAGATCAAACAACGCCACCAATTTACTTCCCTTCCAACAACCAAATAGAAATAATGGGAATATGAGTGACAACATTAACTTAGTTCCTAAACAGGTTCCTGTTCCTCTTCCTCCTTCATCAATTAACTTGAACCACTCGCAACGGCCACCGCCCCTTTTCCCGAAACCTACAAATGTAGCATTTGCTTCTTCTCTTCATATGCTAAACAATGCTCAACTTGGTAACCCTGGTAGAAGGGGAGGGATGATTGGAGTTCAAGACCATTCAATGAATGGTGGTACATTAGTTCAAAACAGTGTAGCTCCTGGTGTTGGAATGCTTGGTTTATCCGTGGCGAATGTCCCGGCTCCTATTGCTTCTCCGGGAAGTAAACTGTCGCCGGACATAATTACAAAGCGTAATTTGGATCCTTCAATACTTTCACCAGTTGCTTATGGAATCAACAAAGGGAGGAAGTTTGGTGCTGTAGAAAAAGTTGTTGAAAGGAGACAAAGGAGAATGATAAAGAATAGGGAATCAGCTGCGAGGTCACGGGCTCGCAAACAGGCCTACACTGTGGAACTAGAGGCTGAAGTTGCAAAACTTAAGGAAGTAAACGAGGAATTACAAAGAAAACAGGCAGAGTTTATGGAAATGCAGAAAAGTAAGGAGGATCTGCTACAGGTTAACAAAATAAGATACTTGAGAAGGACACTTACAGGTCCATGGTAG 1218 0.4187 MNFAWDAMSVKPSGNVNLARQSSVYSLTFDELQSTIGGVGKDFGSMNMDELLKNIWNVEETQALTSTAGGGGVGVGGEGPNNAIGSNLQRQSSLTLPRTLSQRKVDEVWKELMKDNGDSGSSMPQRQPTLGEVTLEEFLVRAGVVKEDVPNHSQQIERPNNNEWFSDFSRSNNATNLLPFQQPNRNNGNMSDNINLVPKQVPVPLPPSSINLNHSQRPPPLFPKPTNVAFASSLHMLNNAQLGNPGRRGGMIGVQDHSMNGGTLVQNSVAPGVGMLGLSVANVPAPIASPGSKLSPDIITKRNLDPSILSPVAYGINKGRKFGAVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAEVAKLKEVNEELQRKQAEFMEMQKSKEDLLQVNKIRYLRRTLTGPW 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03903 405 CDD bZIP_plant_BZIP46 331 385 - -
Vivi5g03903 405 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 18 405 IPR043452 GO:0003700|GO:0045893
Vivi5g03903 405 SUPERFAMILY Leucine zipper domain 331 381 IPR046347 GO:0003700|GO:0006355
Vivi5g03903 405 Pfam bZIP transcription factor 331 385 IPR004827 GO:0003700|GO:0006355
Vivi5g03903 405 Gene3D - 329 387 - -
Vivi5g03903 405 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 334 349 IPR004827 GO:0003700|GO:0006355
Vivi5g03903 405 SMART brlzneu 327 394 IPR004827 GO:0003700|GO:0006355
Vivi5g03903 405 Coils Coil 350 391 - -
Vivi5g03903 405 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 329 374 IPR004827 GO:0003700|GO:0006355
Vivi5g03903 405 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 329 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03903 Vivi-Chr5 134362646 134365367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03903 18 405 bZIP Transcription Factor Family AT4G34000 45.638 8.09e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi5g03903 bZIP_1 3.4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03903 K14432 - gmx:100776600 457.603