Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03869 ATGGCAGAGGCAATAGGAGGAGAGCATATGTTTATTGAAAAAACTCTTGTTTTTCCGGCAATAACAAGAACAACAACAACTTCTCTTCCTCTCACATTTCTTGACTTGCCTTTTGCAGGTCCAAAATATGTTGAACGCCAATTCTTTTACCAATTTCCTCATCCAACCAATTATTTTTGCCAAACAACACTTCCATCTCTCAAACACTCTCTTTCTCTTACACTTCAACATTTCTTCCCCCTTGTTGGAAATCTCCATTGTCCTCCACCACCCCACAAACCTTTTATTCAGTGCACCCAAAATGATGCTTTAACTTTTACCGTCATTGAATCCTCAGCAGATTTCAACCATCTCTCAACCAATCACCATCCAAAAAGTCTAAAAGATTTTAGTCACCTTGTTCCAAAACTAACACAAAAAATAGACTTTGACGACAACGACACATTAATATTTTCATTGTTAACATTGCAAGTATCTATTTTCCCTAACCATGGTCTTTGTATTGCCGTCACATATTGCCATGTGATGGATGACTACTTTTGCAATCATTTCATGAAATCTTGGTCTTTTATCCATAAAAAAGGTGAACTTATTGACATGAAGTCACTACCTTGTTTTGACAGACAAATCTTGAGAGACTCAAAAGGACTGGAGGATATTCTATTAAAAGGCTATTTTGAACAAAGAAAAATGTGGAAGAATAGTTTCCTTGTTCAAAGTCAAACTACAGAAGAAGAACACCAAGACTATGTTAAGACAACTATTGTTTTTACAAAAGAAGAAATTGAGGAGATGAAAATATGGATACTTAATAAGTGGAATACCAATCATCATGATATCAAAGCACCAAAATTTATATCTAAATTTGTTATAACTTGTGGTTTTGTTTGGGCTACTATAGTTAAAACAATAAATAGAAATAACGATGATAAAGAAGATGAAAAAGATGAGTATTTTTGTTTCGTAGGTGATTGCAGAGAGAGACTAGGGTATCCAATACCAGAGGGTTATTTTGGAAATTGTTTAACCTTATGTGTTGCAACTCTGAAGAGAAAGGATATGAAAGGAGAATATGGTTTTCTGAATGCTGCTAAAGCCATTCAAAATACCATAGAAGATATGAAAAAGGATCCTTTGAAAGACGCAGAAGAGTGGGATGCTATGTTTAAAAAGGTTTTTATGTCTGGAGCTCATTTGTTGGTAAGTGGATCTCCTAAATTTAATGTTTATGAGACAGATTTTGAATTTGGAAATCCTATTAAAGTTGAGATGATGATGCATTCATCAAAGGATATGTCTCTTGCTGAAAGTGGGGACAAAAAGGGAGGACTTGAGGTTGGATTGATATTTAAAAGAGAAGAAATACAACATTTATATTCTTTCATTGAACAAGGACTTAGAGCATTAAAATTCTAA 1416 0.3404 MAEAIGGEHMFIEKTLVFPAITRTTTTSLPLTFLDLPFAGPKYVERQFFYQFPHPTNYFCQTTLPSLKHSLSLTLQHFFPLVGNLHCPPPPHKPFIQCTQNDALTFTVIESSADFNHLSTNHHPKSLKDFSHLVPKLTQKIDFDDNDTLIFSLLTLQVSIFPNHGLCIAVTYCHVMDDYFCNHFMKSWSFIHKKGELIDMKSLPCFDRQILRDSKGLEDILLKGYFEQRKMWKNSFLVQSQTTEEEHQDYVKTTIVFTKEEIEEMKIWILNKWNTNHHDIKAPKFISKFVITCGFVWATIVKTINRNNDDKEDEKDEYFCFVGDCRERLGYPIPEGYFGNCLTLCVATLKRKDMKGEYGFLNAAKAIQNTIEDMKKDPLKDAEEWDAMFKKVFMSGAHLLVSGSPKFNVYETDFEFGNPIKVEMMMHSSKDMSLAESGDKKGGLEVGLIFKREEIQHLYSFIEQGLRALKF 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03869 471 Gene3D - 247 469 IPR023213 -
Vivi5g03869 471 Gene3D - 11 238 IPR023213 -
Vivi5g03869 471 PANTHER - 12 468 - -
Vivi5g03869 471 Pfam Transferase family 11 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03869 Vivi-Chr5 133586518 133587933 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03869 13 462 Monolignol Biosynthesis Gene Families AT5G48930 22.796 6.03e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03869 - - tpra:123894642 615.92