Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03856 ATGGGAAAAATCAAATCCCTTTCCTTTTCATTCTTAGCAATAACATTTGCTTTTGTGCTTCACTTTCAACACATAGTTCTGGCACAAGAACATGTAGCATCTTCAGAAAGTGAAGCATTAGGCCTAACACCAGAAACAAAAAGAGAAACACTAGAAATCATCATAGGCGGCGGAGGCGGAGGCGGCGGTGGTGCCTATTCTCCTTCTCCTGCTCCTTCCCCTGAGAATAACTGCCCTCCTCCTCCACCTCCGCCGTGTCCCCCTACCCGATTAGAAAAGGCGCGCGCCGCACTTCTCAAATTCAAAACACTTATCAATGACCCCAACGGGTACACTAGTAACTGGAACAATAATACAGATACCTGCAATTTCAAACGAGTCCTTTGTGGAACATTCCCACAAGATAACCAAAAAGCAGTTGCTGGACTAGACTTCAACCAAGCAAGATTCTCAGGTAAAGACTGTACCAATATACCACTCACAGGTCTCACAGGTATATTAGACAAAATACCAGAATTAACATTCTTCCATGTCAATTCCAACAATTTCTCAGACCAAATCCCAAAAGCAATCACTAATTACCCTTATTTCTACGAACTCGACCTCAGTAACAACAAACTTACCGGTCCCTTTCCAAACGAAGTTCTTCAATCTACCAAGCTAGTTTTCCTAGACCTCAGGTTCAACAACCTCCAAGGCTCTGTTCCATCACAGTTATTCGACAAAGATCTCGACGTAATCTTCATCAACAACAACCAGTTTAGTTCTTGTTTACCTGCGAATTTTGGTTCAACCCCTGCAAGGTACTTAACTTTCGCCCACAACAATTTCGTGGGCGAAATTCCTAAAAGTATTGGTAACGCTGCGAAAACTTTAACCGAAGTTCTTTTCTTACAGAATAGATTTGAAGGTTGTTTACCTTATGAAATCGGTTACTTGAAAAAAGCTACTGTTTTTGATGTTAGTGAAAATTTATTAACCGGTCCTATTCCTGCTTCTTTCGGTTGTTTAGAGAAAATTCAGTTTCTGAATTTAGCGCGTAACAAATTCTACGGTACTGTTCCTGAGAGTGTTTGTGTTTTACCTGGGATACGTAATAATGGGAATTTGTCTCTGGCGAATAATTATTTTACCGCGCTTGAACCGTCGTGTTGGAGTTTGTTGAAGTCGAAGATATTGGATGTTAGTGGGAATTGTATTCCTGGACTTCCGAATCAAAAATCGAAGCAAGAATGTTATGCGTTTCAATGTAAGGTGAAGCCGTGTGCGAATGCTCAGAGTTTGAAGTATGTTCCTTGTAAGACACATTGGGGGCAGAAACAGAATGCTGCCCCGGCTGAAATGGCTACGGAGCCTGTTACTTATAAGTCTCTCAAACCACATCATTTGAGGTTGTGA 1398 0.4156 MGKIKSLSFSFLAITFAFVLHFQHIVLAQEHVASSESEALGLTPETKRETLEIIIGGGGGGGGGAYSPSPAPSPENNCPPPPPPPCPPTRLEKARAALLKFKTLINDPNGYTSNWNNNTDTCNFKRVLCGTFPQDNQKAVAGLDFNQARFSGKDCTNIPLTGLTGILDKIPELTFFHVNSNNFSDQIPKAITNYPYFYELDLSNNKLTGPFPNEVLQSTKLVFLDLRFNNLQGSVPSQLFDKDLDVIFINNNQFSSCLPANFGSTPARYLTFAHNNFVGEIPKSIGNAAKTLTEVLFLQNRFEGCLPYEIGYLKKATVFDVSENLLTGPIPASFGCLEKIQFLNLARNKFYGTVPESVCVLPGIRNNGNLSLANNYFTALEPSCWSLLKSKILDVSGNCIPGLPNQKSKQECYAFQCKVKPCANAQSLKYVPCKTHWGQKQNAAPAEMATEPVTYKSLKPHHLRL 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03856 465 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 39 444 - -
Vivi5g03856 465 Gene3D Ribonuclease Inhibitor 91 267 IPR032675 -
Vivi5g03856 465 MobiDBLite consensus disorder prediction 62 86 - -
Vivi5g03856 465 Gene3D Ribonuclease Inhibitor 268 431 IPR032675 -
Vivi5g03856 465 Pfam Leucine rich repeat N-terminal domain 93 129 IPR013210 -
Vivi5g03856 465 SUPERFAMILY L domain-like 92 400 - -
Vivi5g03856 465 MobiDBLite consensus disorder prediction 72 86 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03856 90 423 Trihelix Transcription Factor Family AT1G12040 38.872 1.98e-73 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03856 - - psat:127108214 793.497