Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03848 ATGGATGATAATAGCGAAGGGGTATTATCGTCATCTTACTACAGCATTCTTGGCGTTAGTTCAGATTCTTCTATAAACGAAATAAGACGCGCGTACAGAAAGCTTGCTATGCAATGGCATCCAGATAGATGGACAAGAACACCTTCTTTACTTAGTGAAGCCAAATGTAAATTCCAGAAAATTCAAGAAGCTTATTCAGTGCTATCTGATCCGAAGAAAAGAACTATGTATGATGCTGGATTGTATGATCCTCAAGAGGAAGAGGATGAGGGATTTAGTGATTTTATGGACGAAATGGCGTCACTTATGGCTGAAGTTAAGCGAGAGGAGAAGGTTTATGGTTTGGATGAATTGCAGGCCATGTTTATGGAAATGGCTGAAGGATTTGAGACTCCTTCGATGTGTTTTGGGACACCATTGAGGGTTGATGAATCTTGTGTTAATAGAGGAAGTGTTTTGACACAATATTAG 471 0.3949 MDDNSEGVLSSSYYSILGVSSDSSINEIRRAYRKLAMQWHPDRWTRTPSLLSEAKCKFQKIQEAYSVLSDPKKRTMYDAGLYDPQEEEDEGFSDFMDEMASLMAEVKREEKVYGLDELQAMFMEMAEGFETPSMCFGTPLRVDESCVNRGSVLTQY 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03848 156 PRINTS DnaJ domain signature 53 73 IPR001623 -
Vivi5g03848 156 PRINTS DnaJ domain signature 32 47 IPR001623 -
Vivi5g03848 156 PRINTS DnaJ domain signature 14 32 IPR001623 -
Vivi5g03848 156 Pfam DnaJ domain 13 78 IPR001623 -
Vivi5g03848 156 CDD DnaJ 13 70 IPR001623 -
Vivi5g03848 156 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Vivi5g03848 156 SMART dnaj_3 11 73 IPR001623 -
Vivi5g03848 156 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Vivi5g03848 156 Gene3D DnaJ domain 9 130 IPR036869 -
Vivi5g03848 156 PANTHER PUTATIVE, EXPRESSED-RELATED 10 131 - -
Vivi5g03848 156 SUPERFAMILY Chaperone J-domain 12 87 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03848 Vivi-Chr5 133171888 133173181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03848 13 79 C2H2 Transcription Factor Family AT1G74250 48.529 6.47e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03848 - - tpra:123907280 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03848 5 133171888 133173181 Vivi5g03848 5 133171888 133173181 ECH