Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03833 ATGAATAATGATGATCAGCCAGTTCTTCCTGATGAAAGAGAGAGGATTGAAGCAGCTGGTGGAAAAGTGATTAATTGGAATGGAAGTCGCGTTCTAGGAATTCTTGCTACTTCTAGATCCATAGGGGATCATTGCATGAAGCCATTTGTGATATCTCAACCAGAGATCAACGTGCATGGAAGAACAAAATCAGATGAGTTTGTTGTGGTGGCAAGTGACGGTCTTTGGGATGTTGTATCAAACAGTTTTGTTTGTGAAGTGGTAAAAAGCTGTCTCCAAGGTCATATGAGGAGGAATCATAGTGATGCTGCTGCAATTCTAGCTGAATTGGCTATGGCTAAGGGAAGCAAAGACAACATCAGTGTTATAGTCATCCAACTCAACAACACTAACATTTGA 399 0.4085 MNNDDQPVLPDERERIEAAGGKVINWNGSRVLGILATSRSIGDHCMKPFVISQPEINVHGRTKSDEFVVVASDGLWDVVSNSFVCEVVKSCLQGHMRRNHSDAAAILAELAMAKGSKDNISVIVIQLNNTNI 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03833 132 Gene3D - 1 131 IPR036457 -
Vivi5g03833 132 CDD PP2Cc 1 127 IPR001932 -
Vivi5g03833 132 PANTHER PROTEIN PHOSPHATASE 3 126 IPR015655 GO:0004722|GO:0006470
Vivi5g03833 132 SMART PP2C_4 1 125 IPR001932 -
Vivi5g03833 132 Pfam Protein phosphatase 2C 2 120 IPR001932 -
Vivi5g03833 132 SUPERFAMILY PP2C-like 2 129 IPR036457 -
Vivi5g03833 132 ProSiteProfiles PPM-type phosphatase domain profile. 1 127 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03833 Vivi-Chr5 132707799 132708326 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03833 1 127 PP2C-type Phosphatase Gene Family AT2G29380 45.652 1.60e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03833 K14497 - vvo:131605478 263.462