Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03814 ATGAGTACTTCATCTGGAGTGGTAATAGTTGATGGTACATATGCATTGCACGCAAAACTGCGTTCTTTACTGGATATTCGAGTTGCAGTGGTTGGTGGTGTTCATTTTAGCCTACTTTCTAAAGTTCGCTATGACATAGGAGATTCTTGTTCACTGGATTACCTTATAGATAGCATTTTTCCATTATTTAGGAAGCACATTGAGCCAGATCTTCATCATGCACAGATCAGAATTAACAACAGCTTTGTGTCATCATTTAGAGAGGCAATCTACAAGGTTAAATGCAGAAGCAAGTCTTCAGATGGATATCCAGGTTCTTCCTCACAAGGAAATCAAGCTCAAACAGATAATTTTATTGAAATGTACCTTAGACCACCTTCGGCGAGTGAAGAAGCAGGGATAAATGATTGGATTAAAGTGCGGCAGTCTGGAATTAGGTATTATTTATCCCTTGGTGACCAGAGGATTGTTGACAAGAATTTCATTATCAGGCCAAAAGCTGAGTTTGAGGTTGGACGAATGACATTGGGTGGGTTGCTGGCTCTTGGGTACATTGTTGTGGTTAGTTATAAACGCGCATCCACAACTATCAATTATGGCAAGGTTTCAATGTCGTTTGAAACCATTGATGTTCTTGGCGAGACATTCTTGGTCACGAGAGGAACCGATAGGAAGACTGTTGGAACAGAAGCATTGAAGATGGGTATCAATGGACCTTGGATTACTAAATCATACCTTGAAATGATTCTTGAGAGAAAAGGTGTACCCCGTCTTAGTACGCCACCACTTGTGTCTAATACAACTGTGACTGGCAGTCAAGAAACAACAATTGTTGCACCAAAGCCAATTCGTGTTATCCCTAACCTTGTTACTGGCCCCGAGGATTTATCTCAGCCATGGACCCGTTCCCCAACAAAATCAAAAATAGAACCTTTTGTGGCTACATGGCGTTTCATGTCTTCAGATTCCTCCCATATTGACCACACAGTCCTAGACTTCTCTCATGAAGCAACCACAGATCCCTCACCTTTCAGGGACACCATTAGGCTTGCTCCCATGCCCGATTCATATGACCTGGACAGGGGATTGCTTTTGGCAGTTCAAGCTATACAAGCTTTGTTGGAGAATAAAGGTGTTCCAGTCATTGTTGGAATTGGTGGTCCAAGTGGGTGTGGGAAGACAAGTTTGGCTCATAAAATGGCAAATATCATTGGTTGTGAAATAATTTCCCTAGAAAGTTATTACAAACAAGTAAAGGATTTTAAATATGATGATTTCAACTCACTTGATTTATCTTTGCTCTCAAAGAATATTGATGACATAAGAAATGGACGAAGAACAAAAGTACCTATATTTGACTTAGAAAGTGGTGCTCGGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGCGTCTATGCGTTGCATCCGGATATTCGAATGTCACTTGACTTGTGGATTGCTGTTGTAGGAGGCGTTCATTCACATTTGATTTCACGTGTTCAAAGGGATAAGAGTAGAGTTGGATGTTTTATTTCCCAAAATGAGATCATGATGACTGTGTTTCCTATGTTCCAACAACTTATTGAACCCCATCTTGTTCATGCACATCTGAAAATTCGAAACGACTTTGACCCTGTGCTTTCTCCCGAGAGTTCACTGTTTGTATTGAAGAGTAACAAAAAAGTGGCATATCAAGATATTCTATCCATTCTTGATCCAGCAAAATTTTGCAGTTCAGTTCAGAAATTTATCGATATTTACATGAGGCTTCCTGGGATCCCTTCTAATGGTCAACTGACAGATAGTGATTGTATTCGGGTTAGAATATGTGAAGGCAGATTTGCGTTACTGATACGTGAGCCTATCAGAGAAGGAAACTTCATCATTCAGCCTAAAGTGGATTTTGATATTAGCATTACTACGGTTGCCGGTCTTCTTAACCTTGGGTATCAAGCAGTTGCTTATATTGAAGCGTCCGCATTCATCTACCAGGATGGAAAGATTCTAATTGAGGTTGATCATCTACAAGATGTTCCTGGTCCATACATTCAGATAAAGGGTGTTTCTAAAGATGCTGTGGCTGCAGCAGGTTCAATGCTTAAATTGGATGGTTCGTATACTACTAAGAGTTACCTTGAAATAGTTTTGGAAAGACTACCAACAATGGAGAGAACATCTGGTGGGATTAACTTTCAGCAATCGACAAGGCTGCTAGAGATAATGGACTTTATTCAATCTCAGGGATGTAGCTCTTCTTCAGAATCCTCATCAAGCAGGGTAATCTCCCCGATTGAAGGCATTATTGAGGAGATGCAATCAAAGATTAGAAGGCTTGAAAGGTGGCTTGCGATAAATACGGTTCTGTGGACATTTCTAATGTCAGCCATTGTTGGTTATTCACTTTATCAAAGAAGGCGTCAATGA 2448 0.4032 MSTSSGVVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSKSSDGYPGSSSQGNQAQTDNFIEMYLRPPSASEEAGINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYIVVVSYKRASTTINYGKVSMSFETIDVLGETFLVTRGTDRKTVGTEALKMGINGPWITKSYLEMILERKGVPRLSTPPLVSNTTVTGSQETTIVAPKPIRVIPNLVTGPEDLSQPWTRSPTKSKIEPFVATWRFMSSDSSHIDHTVLDFSHEATTDPSPFRDTIRLAPMPDSYDLDRGLLLAVQAIQALLENKGVPVIVGIGGPSGCGKTSLAHKMANIIGCEIISLESYYKQVKDFKYDDFNSLDLSLLSKNIDDIRNGRRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDIRMSLDLWIAVVGGVHSHLISRVQRDKSRVGCFISQNEIMMTVFPMFQQLIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDILSILDPAKFCSSVQKFIDIYMRLPGIPSNGQLTDSDCIRVRICEGRFALLIREPIREGNFIIQPKVDFDISITTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVPGPYIQIKGVSKDAVAAAGSMLKLDGSYTTKSYLEIVLERLPTMERTSGGINFQQSTRLLEIMDFIQSQGCSSSSESSSSRVISPIEGIIEEMQSKIRRLERWLAINTVLWTFLMSAIVGYSLYQRRRQ 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03814 815 Gene3D - 379 565 IPR027417 -
Vivi5g03814 815 Gene3D - 566 727 - -
Vivi5g03814 815 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 368 550 IPR027417 -
Vivi5g03814 815 PRINTS Uridine kinase signature 407 418 - -
Vivi5g03814 815 PRINTS Uridine kinase signature 380 397 - -
Vivi5g03814 815 PRINTS Uridine kinase signature 501 511 - -
Vivi5g03814 815 PANTHER URIDINE KINASE 4 117 - -
Vivi5g03814 815 SMART AAA_5 379 523 IPR003593 GO:0016887
Vivi5g03814 815 CDD UMPK_like 382 550 - -
Vivi5g03814 815 Pfam Phosphoribulokinase / Uridine kinase family 382 547 IPR006083 GO:0005524|GO:0016301
Vivi5g03814 815 SUPERFAMILY CYTH-like phosphatases 588 722 IPR033469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03814 Vivi-Chr5 132251812 132271505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03814 375 538 PRT Gene Family AT1G55810 24.157 9.34e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03814 - - gmx:100778905 1458.74