Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03813 ATGGATGATGAAGTTGTTCAGCGAGTCTTCCATGAAGGAGGACGCGATTACTTCCAACAACAGCCTTCAACTTCTTCCTCTTCCTCTTCCATCCTTCAATCTCTCCCGCTCCATGTGTCTTTTGATCATGGATATTATTTGTTGGTAAAATCTATTCAAGAACTGCGAGAGAAAAAAGATGGCCTTGTTACAGTTGGCATTGGTGGTCCAAGCGGTTCTGGTAAAACAAGCTTAACAGAGAAGGTGACGTCTGTTATTGGATGTACTGTTATATCAATGGAGAATTATTGTGATGGAGGTGATGAAGGAAATGTTCTGGATTCTATAGATTTTGTTACCCTTATCAAGAATCTCGAGGATTTGACAAAAGGCAAGGATACATTAATTCCAGAGTTTGATTATCAGCAAAAGAGACGCATAGGCTATAAAAAAATAATGAGTACTTCATCTGGAGTGGTAATAGTTGATGGTACATATGCATTGCACGCAAAACTGCGTTCTTTACTGGATATTCGAGTTGCAGTGGTTGGTGGTGTTCATTTTAGCCTACTTTCTAAAGTTCGCTATGACATAGGAGATTCTTGTTCACTGGATTACCTTATAGATAGCATTTTTCCATTATTTAGGAAGCACATTGAGCCAGATCTTCATCATGCACAGATCAGAATTAACAACAGCTTTGTGTCATCATTTAGAGAGGCAATCTACAAGGTTAAATGCAGAAGCAAGTCTTCAGATGGATATCCAGGTTCTTCCTCACAAGGAAATCAAGCTCAAACAGATAATTTTATTGAAATGTACCTTAGACCACCTTCGGCGAGTGAAGAAGCAGGGATAAATGATTGGATTAAAGTGCGGCAGTCTGGAATTAGGTATTATTTATCCCTTGGTGACCAGAGGATTGTTGACAAGAATTTCATTATCAGGCCAAAAGCTGAGTTTGAGGTTGGACGAATGACATTGGGTGGGTTGCTGGCTCTTGGGTACATTGTTGTGGTTAGTTATAAACGCGCATCCACAACTATCAATTATGGCAAGGTTTCAATGTCGTTTGAAACCATTGATGTTCTTGGCGAGACATTCTTGGTCACGAGAGGAACCGATAGGAAGACTGTTGGAACAGAAGCATTGAAGATGGGTATCAATGGACCTTGGATTACTAAATCATACCTTGAAATGATTCTTGAGAGAAAAGGTGTACCCCGTCTTAGTACGCCACCACTTGTGTCTAATACAACTGTGACTGGCAGTCAAGAAACAACAATTGTTGCACCAAAGCCAATTCGTGTTATCCCTAACCTTGTTACTGGCCCCGAGGATTTATCTCAGCCATGGACCCGTTCCCCAACAAAATCAAAAATAGAACCTTTTGTGGCTACATGGCGTTTCATGTCTTCAGATTCCTCCCATATTGACCACACAGTCCTAGATCCCTCACCTTTCAGGGACACCATTAGGCTTGCTCCCATGCCCGATTCATATGACCTGGACAGGGGATTGCTTTTGGCAGTTCAAGCTATACAAGCTTTGTTGGAGAATAAAGGTGTTCCAGTCATTGTTGGAATTGGTGGTCCAAGTGGGTGTGGGAAGACAAGTTTGGCTCATAAAATGGCAAATATCATTGGTTGTGAAATAATTTCCCTAGAAAGTTATTACAAACAAGTAAAGGATTTTAAATATGATGATTTCAACTCACTTGATTTATCTTTGCTCTCAAAGAATATTGATGACATAAGAAATGGACGAAGAACAAAAGTACCTATATTTGACTTAGAAAGTGGTGCTCGGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGCGTCTATGCGTTGCATCCGGATATTCGAATGTCACTTGACTTGTGGATTGCTGTTGTAGGAGGCGTTCATTCACATTTGATTTCACGTGTTCAAAGGGATAAGAGTAGAGTTGGATGTTTTATTTCCCAAAATGAGATCATGATGACTGTGTTTCCTATGTTCCAACAACTTATTGAACCCCATCTTGTTCATGCACATCTGAAAATTCGAAACGACTTTGACCCTGTGCTTTCTCCCGAGAGTTCACTGTTTGTATTGAAGAGTAACAAAAAAGTGGCATATCAAGATATTCTATCCATTCTTGATCCAGCAAAATTTTGCAGTTCAGTTCAGAAATTTATCGATATTTACATGAGGCTTCCTGGGATCCCTTCTAATGGTCAACTGACAGATAGTGATTGTATTCGGGTTAGAATATGTGAAGGCAGATTTGCGTTACTGATACGTGAGCCTATCAGAGAAGGAAACTTCATCATTCAGCCTAAAGTGGATTTTGATATTAGCATTACTACGGTTGCCGGTCTTCTTAACCTTGGGTATCAAGCAGTTGCTTATATTGAAGCGTCCGCATTCATCTACCAGGATGGAAAGATTCTAATTGAGGTTGATCATCTACAAGATGTTCCTGGTCCATACATTCAGATAAAGGGTGTTTCTAAAGATGCTGTGGCTGCAGCAGGTTCAATGCTTAAATTGGATGGTTCGTATACTACTAAGAGTTACCTTGAAATAGTTTTGGAAAGACTACCAACAATGGAGAGAACATCTGGTGGGATTAACTTTCAGCAATCGACAAGGCTGCTAGAGATAATGGACTTTATTCAATCTCAGGGATGTAGCTCTTCTTCAGAATCCTCATCAAGCAGGGTAATCTCCCCGATTGAAGGCATTATTGAGGAGATGCAATCAAAGATTAGAAGGCTTGAAAGGTGGCTTGCGATAAATACGGTTCTGTGGACATTTCTAATGTCAGCCATTGTTGGTTATTCACTTTATCAAAGAAGGCGTCAATGA 2859 0.4008 MDDEVVQRVFHEGGRDYFQQQPSTSSSSSSILQSLPLHVSFDHGYYLLVKSIQELREKKDGLVTVGIGGPSGSGKTSLTEKVTSVIGCTVISMENYCDGGDEGNVLDSIDFVTLIKNLEDLTKGKDTLIPEFDYQQKRRIGYKKIMSTSSGVVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSKSSDGYPGSSSQGNQAQTDNFIEMYLRPPSASEEAGINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYIVVVSYKRASTTINYGKVSMSFETIDVLGETFLVTRGTDRKTVGTEALKMGINGPWITKSYLEMILERKGVPRLSTPPLVSNTTVTGSQETTIVAPKPIRVIPNLVTGPEDLSQPWTRSPTKSKIEPFVATWRFMSSDSSHIDHTVLDPSPFRDTIRLAPMPDSYDLDRGLLLAVQAIQALLENKGVPVIVGIGGPSGCGKTSLAHKMANIIGCEIISLESYYKQVKDFKYDDFNSLDLSLLSKNIDDIRNGRRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDIRMSLDLWIAVVGGVHSHLISRVQRDKSRVGCFISQNEIMMTVFPMFQQLIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDILSILDPAKFCSSVQKFIDIYMRLPGIPSNGQLTDSDCIRVRICEGRFALLIREPIREGNFIIQPKVDFDISITTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVPGPYIQIKGVSKDAVAAAGSMLKLDGSYTTKSYLEIVLERLPTMERTSGGINFQQSTRLLEIMDFIQSQGCSSSSESSSSRVISPIEGIIEEMQSKIRRLERWLAINTVLWTFLMSAIVGYSLYQRRRQ 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03813 952 SMART AAA_5 61 211 IPR003593 GO:0016887
Vivi5g03813 952 SMART AAA_5 516 660 IPR003593 GO:0016887
Vivi5g03813 952 CDD UMPK_like 64 226 - -
Vivi5g03813 952 Gene3D - 63 243 IPR027417 -
Vivi5g03813 952 Gene3D - 516 701 IPR027417 -
Vivi5g03813 952 SUPERFAMILY CYTH-like phosphatases 725 859 IPR033469 -
Vivi5g03813 952 Gene3D - 702 864 - -
Vivi5g03813 952 Pfam Phosphoribulokinase / Uridine kinase family 519 684 IPR006083 GO:0005524|GO:0016301
Vivi5g03813 952 Pfam Phosphoribulokinase / Uridine kinase family 108 223 IPR006083 GO:0005524|GO:0016301
Vivi5g03813 952 CDD UMPK_like 519 687 - -
Vivi5g03813 952 PRINTS Uridine kinase signature 638 648 - -
Vivi5g03813 952 PRINTS Uridine kinase signature 517 534 - -
Vivi5g03813 952 PRINTS Uridine kinase signature 544 555 - -
Vivi5g03813 952 PANTHER URIDINE KINASE 496 875 - -
Vivi5g03813 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 176 IPR027417 -
Vivi5g03813 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 505 687 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03813 Vivi-Chr5 132251812 132272674 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03813 512 675 PRT Gene Family AT1G55810 24.157 8.45e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03813 - - gmx:100778905 1679.84