Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03811 ATGGCCTTGTTACAGTTGGCATTGGTGGTCCAAGCGGTTCTGGTAAAACAAGAGAAGGTGACGTCTGTTATTGGATGTACTGTTATATCAATGGAGAATTATTGTGATGGAGGTGATGAAGGAAATGTTCTGGATTCTATAGATTTTGTTACCCTTATCAAGAATCTCGAGGATTTGACAAAAGGCAAGGATACATTAATTCCAGAGTTTGATTATCAGCAAAAGAGACGCATAGGCTATAAAAAAATAATGAGTACTTCATCTGGAGTGGTAATAGTTGATGGTACATATGCATTGCACGCAAAACTGCGTTCTTTACTGGATATTCGAGTTGCAGTGGTTGGTGGTGTTCATTTTAGCCTACTTTCTAAAGTTCGCTATGACATAGGAGATTCTTGTTCACTGGATTACCTTATAGATAGCATTTTTCCATTATTTAGGAAGCACATTGAGCCAGATCTTCATCATGCACAGATCAGAATTAACAACAGCTTTGTGTCATCATTTAGAGAGGCAATCTACAAGGTTAAATGCAGAAGCAAGTCTTCAGATGGATATCCAGGTTCTTCCTCACAAGGAAATCAAGCTCAAACAGATAATTTTATTGAAATGTACCTTAGACCACCTTCGGCGAGTGAAGAAGCAGGGATAAATGATTGGATTAAAGTGCGGCAGTCTGGAATTAGGTATTATTTATCCCTTGGTGACCAGAGGATTGTTGACAAGAATTTCATTATCAGGCCAAAAGCTGAGTTTGAGGTTGGACGAATGACATTGGGTGGGTTGCTGGCTCTTGGGTACATTGTTGTGGTTAGTTATAAACGCGCATCCACAACTATCAATTATGGCAAGGTTTCAATGTCGTTTGAAACCATTGATGTTCTTGGCGAGACATTCTTGGTCACGAGAGGAACCGATAGGAAGACTGTTGGAACAGAAGCATTGAAGATGGGTATCAATGGACCTTGGATTACTAAATCATACCTTGAAATGATTCTTGAGAGAAAAGGTGTACCCCGTCTTAGTACGCCACCACTTGTGTCTAATACAACTGTGACTGGCAGTCAAGAAACAACAATTGTTGCACCAAAGCCAATTCGTGTTATCCCTAACCTTGTTACTGGCCCCGAGGATTTATCTCAGCCATGGACCCGTTCCCCAACAAAATCAAAAATAGAACCTTTTGTGGCTACATGGCGTTTCATGTCTTCAGATTCCTCCCATATTGACCACACAGTCCTAGACTTCTCTCATGAAGCAACCACAGATCCCTCACCTTTCAGGGACACCATTAGGCTTGCTCCCATGCCCGATTCATATGACCTGGACAGGGGATTGCTTTTGGCAGTTCAAGCTATACAAGCTTTGTTGGAGAATAAAGGTGTTCCAGTCATTGTTGGAATTGGTGGTCCAAGTGGGTGTGGGAAGACAAGTTTGGCTCATAAAATGGCAAATATCATTGGTTGTGAAATAATTTCCCTAGAAAGTTATTACAAACAAGTAAAGGATTTTAAATATGATGATTTCAACTCACTTGATTTATCTTTGCTCTCAAAGAATATTGATGACATAAGAAATGGACGAAGAACAAAAGTACCTATATTTGACTTAGAAAGTGGTGCTCGGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGCGTCTATGCGTTGCATCCGGATATTCGAATGTCACTTGACTTGTGGATTGCTGTTGTAGGAGGCGTTCATTCACATTTGATTTCACGTGTTCAAAGGGATAAGAGTAGAGTTGGATGTTTTATTTCCCAAAATGAGATCATGATGACTGTGTTTCCTATGTTCCAACAACTTATTGAACCCCATCTTGTTCATGCACATCTGAAAATTCGAAACGACTTTGACCCTGTGCTTTCTCCCGAGAGTTCACTGTTTGTATTGAAGAGTAACAAAAAAGTGGCATATCAAGATATTCTATCCATTCTTGATCCAGCAAAATTTTGCAGTTCAGTTCAGAAATTTATCGATATTTACATGAGGCTTCCTGGGATCCCTTCTAATGGTCAACTGACAGATAGTGATTGTATTCGGGTTAGAATATGTGAAGGCAGATTTGCGTTACTGATACGTGAGCCTATCAGAGAAGGAAACTTCATCATTCAGCCTAAAGTGGATTTTGATATTAGCATTACTACGGTTGCCGGTCTTCTTAACCTTGGGTATCAAGCAGTTGCTTATATTGAAGCGTCCGCATTCATCTACCAGGATGGAAAGATTCTAATTGAGGTTGATCATCTACAAGATGTTCCTGGTCCATACATTCAGATAAAGGGTGTTTCTAAAGATGCTGTGGCTGCAGCAGGTTCAATGCTTAAATTGGATGGTTCGTATACTACTAAGAGTTACCTTGAAATAGTTTTGGAAAGACTACCAACAATGGAGAGAACATCTGGTGGGATTAACTTTCAGCAATCGACAAGGCTGCTAGAGATAATGGACTTTATTCAATCTCAGGGATGTAGCTCTTCTTCAGAATCCTCATCAAGCAGGGTAATCTCCCCGATTGAAGGCATTATTGAGGAGATGCAATCAAAGATTAGAAGGCTTGAAAGGTGGCTTGCGATAAATACGGTTCTGTGGACATTTCTAATGTCAGCCATTGTTGGTTATTCACTTTATCAAAGAAGGCGTCAATGA 2697 0.4004 MALLQLALVVQAVLVKQEKVTSVIGCTVISMENYCDGGDEGNVLDSIDFVTLIKNLEDLTKGKDTLIPEFDYQQKRRIGYKKIMSTSSGVVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSKSSDGYPGSSSQGNQAQTDNFIEMYLRPPSASEEAGINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYIVVVSYKRASTTINYGKVSMSFETIDVLGETFLVTRGTDRKTVGTEALKMGINGPWITKSYLEMILERKGVPRLSTPPLVSNTTVTGSQETTIVAPKPIRVIPNLVTGPEDLSQPWTRSPTKSKIEPFVATWRFMSSDSSHIDHTVLDFSHEATTDPSPFRDTIRLAPMPDSYDLDRGLLLAVQAIQALLENKGVPVIVGIGGPSGCGKTSLAHKMANIIGCEIISLESYYKQVKDFKYDDFNSLDLSLLSKNIDDIRNGRRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDIRMSLDLWIAVVGGVHSHLISRVQRDKSRVGCFISQNEIMMTVFPMFQQLIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDILSILDPAKFCSSVQKFIDIYMRLPGIPSNGQLTDSDCIRVRICEGRFALLIREPIREGNFIIQPKVDFDISITTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVPGPYIQIKGVSKDAVAAAGSMLKLDGSYTTKSYLEIVLERLPTMERTSGGINFQQSTRLLEIMDFIQSQGCSSSSESSSSRVISPIEGIIEEMQSKIRRLERWLAINTVLWTFLMSAIVGYSLYQRRRQ 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03811 898 SUPERFAMILY CYTH-like phosphatases 671 805 IPR033469 -
Vivi5g03811 898 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 451 633 IPR027417 -
Vivi5g03811 898 SMART AAA_5 462 606 IPR003593 GO:0016887
Vivi5g03811 898 Gene3D - 649 810 - -
Vivi5g03811 898 PANTHER URIDINE KINASE 20 201 - -
Vivi5g03811 898 PRINTS Uridine kinase signature 463 480 - -
Vivi5g03811 898 PRINTS Uridine kinase signature 584 594 - -
Vivi5g03811 898 PRINTS Uridine kinase signature 490 501 - -
Vivi5g03811 898 CDD UMPK_like 21 164 - -
Vivi5g03811 898 CDD UMPK_like 465 633 - -
Vivi5g03811 898 Gene3D - 6 181 IPR027417 -
Vivi5g03811 898 Gene3D - 462 648 IPR027417 -
Vivi5g03811 898 Pfam Phosphoribulokinase / Uridine kinase family 46 161 IPR006083 GO:0005524|GO:0016301
Vivi5g03811 898 Pfam Phosphoribulokinase / Uridine kinase family 465 630 IPR006083 GO:0005524|GO:0016301
Vivi5g03811 898 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 114 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03811 Vivi-Chr5 132251812 132272676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03811 458 621 PRT Gene Family AT1G55810 24.157 8.47e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03811 - - gmx:100778905 1567.36