Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03809 ATGGACGAGCCTAGTACCAGTACTAGTAACAACGCTATACGTTCAGATTTGGTGGAAATAACACTAGATGTGCACCAAGTTGTTCCACCACCAGACGTAAGCACTCTACAAACAATCAAATTCAAACTCAAGGAAACTTTTTTCCCCGACGATCCTATACGACAATTCAAAGGAAAAACTCTTAAAACAAAACTCATCCTTGGAGCTCAATACTTTTTCCCTATTCTTCAATGGCTACCTAATTACAGTCTCAAACTCTTCAAATCCGATCTCGTTGCTGGCCTCACTATTGCTAGCTTAGCCATTCCGCAGGGAATTAGTTACGCTAAGCTTGCGACTCTTCCTCCGATTATAGGACTATATTCGAGTTTTGTTCCACCGTTAGTTTATGTTGTTCTTGGAAGCTCGAGAGATCTTGCGGTAGGACCCGTTTCGATTGCGTCTCTTGTGATGGGATTCATGATTGCAGAGGAAGTGTCTCCCACGACACAATCTGATCTATTCATTCAGTTAGCTTTTACTTCAACGTTTTTTGCTGGTATTTTTCAAGCTGCTCTTGGAATTTTAAGGTTAGGTTTTATCATTGATTTTCTATCTAAGGCGATTTTAATTGGGTTTACGGCTGGAGCTGCTGTAATTGTGTCTCTGCAACAGCTAAAGAGTTTACTTGGAATCACACATTTCACTAAACAGATGGCTATTATTCCGGTCATGCGTTCAGTTTTTGACAATATGCATGAGTGGTCATGGGAAACAATAGTGATGGGGGCTTCCTTCTTAGTGATACTTCTGTTTGCAAGACAAGTTAGCATATGGAAGCCACAGTTATTCTGGGTGTCAGCTGGAGCTCCTCTCGCATGTGTCATCATCTCCACCATCTTCACTTTTGTAATCAAGGGTCAAAAACATAACATCAGTATAATTGGGAAATTGCAACAAGGAATAAATCCTGCTTCAGCCAACATGTTGCTTTTCAGTGGAGATTATCTTGGTCTAACCGTCAAAACCGGAATTGTCTCTGGCATTTTAGCACTCACTGAAGGAATTGCAGTGGGGAGAACATTTGCAACTCTAAGAAACTACAAGTTGGATGGAAATAAAGAAATGATGGCAATTGGGTTCATGAATATGGTTGGCTCTACCACATCATGCTATGTCACAACAGGATCTTTTTCTCGGTCAGCTGTAAATCATAACGCGGGCGCAAAAACAGCAATGTCGAACTTAGTAATGGCTGTGACAGTCATGGTGACACTCCTTTTTCTTATGCCATTATTTCGATTCACGCCTAATGCTGTATTGGGTGCGATCATAATAGCAGCAGTAGTTGGCCTAATTGATATCCCTGCTGCTTATCTCATTTGGAAGCTCGACAAATTCGATTTCATTGTGTTGTTGACTGCTTTTTTTGGTGTTATTTTCATCTCTGTCCAATACGGCCTCGCTATTGCGGTGGGATTGTCAATTTTTAGGATCCTGCTGCAAGTTACAAGGCCTAAGACAGCAATGTTAGGGAACATACCGGCGACAGACATATATAGAAATCTTCACCATTATAAAGAAGCTACAAGAGTACCTGGTTTTCTAATTCTAAGTATAGAGGCTCCAATCAATTTTGCTAATATTACATATCTCCATGAGAGGATATTACGGTGGATAGAAGAAGAAGAGGACACCAAGACAGAAAACTCATGCCTTCAATATGTGATTCTTGAATTGTCAGCTGTGAGTTCCATAGACACAAGTGGAGTCTCACTTTTCAAGGAGTTGAAAGGAACATTGAAAATAAAAGGTGTTGAGCTTATATTGGTGAATCCTCTAGCTGAGGTTATTGGAAAGCTGAAAAAAGCAGATGAAGATAACGATTTTGTACGATCAGATTACCTTTTTTTGACAGTTGGAGAGGCCGTAGCTGCACTTTCATCAGCAACGAAAAGCCAATCACAAACCATAGAAGAGATAGAATAG 1968 0.404 MDEPSTSTSNNAIRSDLVEITLDVHQVVPPPDVSTLQTIKFKLKETFFPDDPIRQFKGKTLKTKLILGAQYFFPILQWLPNYSLKLFKSDLVAGLTIASLAIPQGISYAKLATLPPIIGLYSSFVPPLVYVVLGSSRDLAVGPVSIASLVMGFMIAEEVSPTTQSDLFIQLAFTSTFFAGIFQAALGILRLGFIIDFLSKAILIGFTAGAAVIVSLQQLKSLLGITHFTKQMAIIPVMRSVFDNMHEWSWETIVMGASFLVILLFARQVSIWKPQLFWVSAGAPLACVIISTIFTFVIKGQKHNISIIGKLQQGINPASANMLLFSGDYLGLTVKTGIVSGILALTEGIAVGRTFATLRNYKLDGNKEMMAIGFMNMVGSTTSCYVTTGSFSRSAVNHNAGAKTAMSNLVMAVTVMVTLLFLMPLFRFTPNAVLGAIIIAAVVGLIDIPAAYLIWKLDKFDFIVLLTAFFGVIFISVQYGLAIAVGLSIFRILLQVTRPKTAMLGNIPATDIYRNLHHYKEATRVPGFLILSIEAPINFANITYLHERILRWIEEEEDTKTENSCLQYVILELSAVSSIDTSGVSLFKELKGTLKIKGVELILVNPLAEVIGKLKKADEDNDFVRSDYLFLTVGEAVAALSSATKSQSQTIEEIE 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03809 655 Pfam Sulfate permease family 87 466 IPR011547 GO:0016020
Vivi5g03809 655 PANTHER SULFATE TRANSPORTER 40 644 IPR001902 GO:0016020|GO:0055085
Vivi5g03809 655 ProSitePatterns SLC26A transporters signature. 116 137 IPR018045 GO:0008271|GO:0008272
Vivi5g03809 655 Pfam STAS domain 519 636 IPR002645 -
Vivi5g03809 655 CDD STAS_SulP_like_sulfate_transporter 519 632 - -
Vivi5g03809 655 ProSiteProfiles STAS domain profile. 518 640 IPR002645 -
Vivi5g03809 655 FunFam Sulfate transporter 31 498 643 - -
Vivi5g03809 655 SUPERFAMILY SpoIIaa-like 523 640 IPR036513 -
Vivi5g03809 655 NCBIfam sulfate permease 74 636 IPR001902 GO:0016020|GO:0055085
Vivi5g03809 655 Gene3D STAS domain 498 643 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03809 Vivi-Chr5 132228803 132235913 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03809 19 649 Inorganic Solute Cotransporters AT3G15990 63.191 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03809 K17471 - gmx:100779433 960.288