Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03807 ATGGATCCTAACACCTTACATTCTTCACACTCACATTGTGTGCAACTGGAAATTCACCAAGTTGTTCCACCACCTCACAAAACCACTTTACACAAACTCAAACTTAGGCTCAAAGAAACTTTTTTCCCTGATGATCCCATGCGCCAGTTCAAAGGAAAATCTCCTAAGACAAAACTTATCTTAGGAGCGAAATACATGTTCCCGGTTCTTCAATGGGGCGCGAATTATAATTTGAAACTCTTCAAATCCGATCTTGTTTCCGGCCTTACTATTGCTAGCTTGGCCATACCGCAGGGAATCAGTTATGCTAAGCTTGCCAATCTTCCTCCAATAGTCGGACTATATTCTAGTTTTGTTCCTCCACTTATTTATGCTGTTCTTGGAAGCTCAAGGGATCTAGCAGTAGGGCCTGTTTCAATTGCGTCGCTTGTTTTAGGATCTATGCTTCGACAAGAAGTGTCACCTTCTGGTGAACCTGTTCTGTTTCTTCAACTTGCTCTTACTTCAACCTTTTTTGCTGGTCTATTTCAAGCTTCACTAGGAATTCTAAGGTTAGGATTTATTATTGATTTTTTATCTAAAGCAATCCTGATTGGATTCATGGCTGGAGCTGCTATAATTGTGTCTTTGCAACAACTTAAGAGCTTACTTGGAATCACACACTTTACTAAAGAGATGGGTCTTGTTCCTGTTATGACTTCTGTTTTTCAAAATATACATGAGTGGTCATGGCAAACAATAGTGATGGGAATTTGCTTCTTGGTGATACTACTCATAGCAAGACACGTTAGCATAAGGAAACCAAAACTATTCTGGGTGTCTGCTGGAGCTCCTCTTATGTGTGTCATCATCTCTACTCTTCTGGCTTTTGCTATCCAGGCTCAAAATCATGGCATCAGTGTAATTGGAAAATTACAAGCAGGAATAAATCCTTCTTCATGGAATATGTTGAAATTTCATGGAAGCCACCTTGGTCTAGTTATGAAAACAGGGCTTATCACTGGCATTTTGTCGCTAACTGAAGGTATTGCAGTAGGAAGAACATTTGCAGCTCTGGGAAATTACAAAGTAGATGGAAATAAGGAAATGATGGCAATCGGGTTTATGAATGTGGTTGGCTCTTTCACTTCCTGCTATGTCACTACAGGTGCTTTCTCTCGTTCAGCTGTTAATAACAATGCCGGAGCAAAAACAGCAGCTTCAAACATAGTAATGTCTGTGACAGTGATGGTGACACTCCTTTTTCTTATGCCATTGTTCCAGTACACACCTAATGTTGTATTGGGTGCAATCATAGTCACGGCGGTGATTGGCCTTGTTGATATCCCTGCTGCTTGTCACATTTGGAAGATGGACAAGTTCGACTTCCTTGTGATGTTAACTGCTTTCTTGGGTGTTGTTTTCATCTCAGTCCAGGAAGGCCTTGCTGTTGCAGTTGGATTATCGACTTTTAGGTTACTCCTGCAAATTACGAGGCCTAAAACAGTAATGATGGGGAATATACCAGGGACAGACATATATAGAAATCTTCATCAATACATGGAAGCTAAAAGAATACCGGGCTTTCTTATTTTGAGCATCGAGGCTCCCATCAATTTTGCGAACATCACATATCTCAATGACAGGACAATGCGATGGATTGAAGAGGAAGATAACGAAAAGGAACACTCGAGCCTTCGATACTTAATCCTAGATATGTCAGCTGTGAGCGCCATTGACACAAGCGGAATCTCACTTTTCAAGGAATTAAAGGCAACAATGGAAAAGAAGGGCATTGAGCTTGTGTTGGTGAATCCACTGGCTGAGGTCATAGAAAAGTTGAAAAAAGCAGATCACGCTAATAATTTCATTCGAGCAGACAGCCTTTTCTTGACAGTTGGAGAGGCTGTTGCTTCACTTTCATCAACAATGAAGAGTCAAACAACCACGACAGAAGAAACACAAAACCGTGCCACGTAA 1959 0.4094 MDPNTLHSSHSHCVQLEIHQVVPPPHKTTLHKLKLRLKETFFPDDPMRQFKGKSPKTKLILGAKYMFPVLQWGANYNLKLFKSDLVSGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYAVLGSSRDLAVGPVSIASLVLGSMLRQEVSPSGEPVLFLQLALTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTKEMGLVPVMTSVFQNIHEWSWQTIVMGICFLVILLIARHVSIRKPKLFWVSAGAPLMCVIISTLLAFAIQAQNHGISVIGKLQAGINPSSWNMLKFHGSHLGLVMKTGLITGILSLTEGIAVGRTFAALGNYKVDGNKEMMAIGFMNVVGSFTSCYVTTGAFSRSAVNNNAGAKTAASNIVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLVDIPAACHIWKMDKFDFLVMLTAFLGVVFISVQEGLAVAVGLSTFRLLLQITRPKTVMMGNIPGTDIYRNLHQYMEAKRIPGFLILSIEAPINFANITYLNDRTMRWIEEEDNEKEHSSLRYLILDMSAVSAIDTSGISLFKELKATMEKKGIELVLVNPLAEVIEKLKKADHANNFIRADSLFLTVGEAVASLSSTMKSQTTTTEETQNRAT 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03807 652 ProSiteProfiles STAS domain profile. 512 633 IPR002645 -
Vivi5g03807 652 PANTHER SULFATE TRANSPORTER 31 639 IPR001902 GO:0016020|GO:0055085
Vivi5g03807 652 NCBIfam sulfate permease 68 629 IPR001902 GO:0016020|GO:0055085
Vivi5g03807 652 CDD STAS_SulP_like_sulfate_transporter 513 611 - -
Vivi5g03807 652 ProSitePatterns SLC26A transporters signature. 110 131 IPR018045 GO:0008271|GO:0008272
Vivi5g03807 652 FunFam Sulfate transporter 31 492 636 - -
Vivi5g03807 652 Pfam STAS domain 513 629 IPR002645 -
Vivi5g03807 652 Gene3D STAS domain 492 636 IPR036513 -
Vivi5g03807 652 Pfam Sulfate permease family 81 461 IPR011547 GO:0016020
Vivi5g03807 652 SUPERFAMILY SpoIIaa-like 515 633 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03807 Vivi-Chr5 132213393 132217786 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03807 16 640 Inorganic Solute Cotransporters AT3G15990 65.769 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03807 K17471 - gmx:100787284 1082.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03807 5 132213393 132217786 Vivi5g03807 5 132213393 132217786 ECH