Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03755 ATGGATCCCACCGTCTCCCACCCTGGTCCGTTGCTTATAAACTATATACAACCATACAGTTCATCTGAATCTAATTCATCTGAATCAAAGATCATCTTTGGTAGCTTTGGTTCCGAATCCTCTGAATCAAAGTCTGTGGCAAAGGTCAGCAAAAACTATATTCCACTATCCACCGCTATTCCCGATGAATTTGCTTTCTCTATTCTTTCAAAACTCTCTATTAAGTCATTGAAGCGCTTTGGATGCGTGTGCAAATCATGGTCCGCTTTATTTGAAAATACTGATTTCATGACAATGTACAGAGAACATTTCATATCTCGTCATGGTTCTGACGATGATTATCATACATTTATTCTCACAAGTGATAAGCTTGATCATGGTCTTGTCCACTCTGAATTTCATTTGGTCGAAAATAGACTCGAACTAAATTTGCCATCTCCACTTCAACGGTCTGGCGAATATACTTGTATTCTCGGCTCCACAAGTGTTAACGGCTTTTTTTGTCTCGGCCAACATTATCTAGCTATGAAGACGCCCCAATATGTATTATGGAATCCCCTTACCGACGAATTCATGGGCATTCCTTCTAGCCCCACTGAACTTACACCAAAACACCCTAGTTTCGACACCCTCAGTCTCGAACCTATTTTTCACGGGTTTGGTTATGACCAACTTAGACATGACTTTAAGGTCGTTCAGTATGTATCATTTGTTTCCGCTCGCTCTTCTCGGCTTACAACAAGTTTTTTTGAGATATATAGTTTAAAAAGTAATTCTTGGAGAATGATCGACATGGACAATGATCTGTCTCATTGGGGTTATTTTTATTCTAGGGCATTTTCTGGTCACGAAGTTTATCTGGATGGAGCGTGTCATTGGTTGGTTTCGGAATGTATCAACCATCGAAGGGCTATGACCGTCTTGTCATTTGACTTGAGTCGTGAGGTGTTCTTTACAACACCCGTCGGGGAACAACCTTATGCTCCATACGCTGATCTTCTATGCTTGACAGTGTTAAATGGATCTATTGCTTTACTATCCAATCATCACGACGATGTTGTTTTTCACATATCTATTCTGGGTGAACTCGGTGTGAGTGAATCATGGATCAAACTATATACTTATGGCCCCTCACCTTCCATCCAATGGCCACCACTTGGATTTGGGAAGATGGGACATCTTTTCATTAGAAAAAAAGATCATGAAATCGCCTATGTTGATTTGAGCACCCAAATTATTCAGGAGGTTGGTATTACTAGTGGAAAGACAAATTATAATATTGGCGGTCTTTACAAGGAAAGCCTTCTTTCGTCGGAGGATCAATGTAACTAG 1332 0.4032 MDPTVSHPGPLLINYIQPYSSSESNSSESKIIFGSFGSESSESKSVAKVSKNYIPLSTAIPDEFAFSILSKLSIKSLKRFGCVCKSWSALFENTDFMTMYREHFISRHGSDDDYHTFILTSDKLDHGLVHSEFHLVENRLELNLPSPLQRSGEYTCILGSTSVNGFFCLGQHYLAMKTPQYVLWNPLTDEFMGIPSSPTELTPKHPSFDTLSLEPIFHGFGYDQLRHDFKVVQYVSFVSARSSRLTTSFFEIYSLKSNSWRMIDMDNDLSHWGYFYSRAFSGHEVYLDGACHWLVSECINHRRAMTVLSFDLSREVFFTTPVGEQPYAPYADLLCLTVLNGSIALLSNHHDDVVFHISILGELGVSESWIKLYTYGPSPSIQWPPLGFGKMGHLFIRKKDHEIAYVDLSTQIIQEVGITSGKTNYNIGGLYKESLLSSEDQCN 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03755 443 Gene3D - 58 95 - -
Vivi5g03755 443 PANTHER OS09G0372900 PROTEIN-RELATED 68 390 - -
Vivi5g03755 443 Pfam F-box associated 284 409 IPR006527 -
Vivi5g03755 443 SMART fbox_2 60 100 IPR001810 GO:0005515
Vivi5g03755 443 NCBIfam F-box protein interaction domain 162 376 IPR017451 -
Vivi5g03755 443 SUPERFAMILY F-box domain 58 110 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03755 Vivi-Chr5 131256872 131260324 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03755 250 407 Carbohydrate Esterase AT1G25141 24.684 6.13e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03755 - - vvo:131602513 872.848