Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03754 ATGATGGATTCCGCCACCGTGTCCCACGATGATCAGAAGGTTAGCAGAAGATATATTCCAATATCATTCTACATGGATTCCGCCGTCAACCACCCTGGTCCGAGTCGTAAGGTCAGCAAAAACTCTATCCCACTATCGTTCTACACAACCACCCACGTCTACCACCCTGCTCCTGATCCGACCTCTGAATCAAAGATTGATGTATTTGTAGTAAACGAAGAAAACGATACCAGAAAGAAGAATCCACTATCGTTCTACATGGATCCCACCGTCTCCCACCCTGGTCCGTTGCTTATAAACTATATACAACCATACAGTTCATCTGAATCTAATTCATCTGAATCAAAGATCATCTTTGGTAGCTTTGGTTCCGAATCCTCTGAATCAAAGTCTGTGGCAAAGGTCAGCAAAAACTATATTCCACTATCCACCGCTATTCCCGATGAATTTGCTTTCTCTATTCTTTCAAAACTCTCTATTAAGTCATTGAAGCGCTTTGGATGCGTGTGCAAATCATGGTCCGCTTTATTTGAAAATACTGATTTCATGACAATGTACAGAGAACATTTCATATCTCGTCATGGTTCTGACGATGATTATCATACATTTATTCTCACAAGTGATAAGCTTGATCATGGTCTTGTCCACTCTGAATTTCATTTGGTCGAAAATAGACTCGAACTAAATTTGCCATCTCCACTTCAACGGTCTGGCGAATATACTTGTATTCTCGGCTCCACAAGTGTTAACGGCTTTTTTTGTCTCGGCCAACATTATCTAGCTATGAAGACGCCCCAATATGTATTATGGAATCCCCTTACCGACGAATTCATGGGCATTCCTTCTAGCCCCACTGAACTTACACCAAAACACCCTAGTTTCGACACCCTCAGTCTCGAACCTATTTTTCACGGGTTTGGTTATGACCAACTTAGACATGACTTTAAGGTCGTTCAGTATGTATCATTTGTTTCCGCTCGCTCTTCTCGGCTTACAACAAGTTTTTTTGAGATATATAGTTTAAAAAGTAATTCTTGGAGAATGATCGACATGGACAATGATCTGTCTCATTGGGGTTATTTTTATTCTAGGGCATTTTCTGGTCACGAAGTTTATCTGGATGGAGCGTGTCATTGGTTGGTTTCGGAATGTATCAACCATCGAAGGGCTATGACCGTCTTGTCATTTGACTTGAGTCGTGAGGTGTTCTTTACAACACCCGTCGGGGAACAACCTTATGCTCCATACGCTGATCTTCTATGCTTGACAGTGTTAAATGGATCTATTGCTTTACTATCCAATCATCACGACGATGTTGTTTTTCACATATCTATTCTGGGTGAACTCGGTGTGAGTGAATCATGGATCAAACTATATACTTATGGCCCCTCACCTTCCATCCAATGGCCACCACTTGGATTTGGGAAGATGGGACATCTTTTCATTAGAAAAAAAGATCATGAAATCGCCTATGTTGATTTGAGCACCCAAATTATTCAGGAGGTTGGTATTACTAGTGGAAAGACAAATTATAATATTGGCGGTCTTTACAAGGAAAGCCTTCTTTCGTCGGAGGATCAATGTAACTAG 1590 0.4113 MMDSATVSHDDQKVSRRYIPISFYMDSAVNHPGPSRKVSKNSIPLSFYTTTHVYHPAPDPTSESKIDVFVVNEENDTRKKNPLSFYMDPTVSHPGPLLINYIQPYSSSESNSSESKIIFGSFGSESSESKSVAKVSKNYIPLSTAIPDEFAFSILSKLSIKSLKRFGCVCKSWSALFENTDFMTMYREHFISRHGSDDDYHTFILTSDKLDHGLVHSEFHLVENRLELNLPSPLQRSGEYTCILGSTSVNGFFCLGQHYLAMKTPQYVLWNPLTDEFMGIPSSPTELTPKHPSFDTLSLEPIFHGFGYDQLRHDFKVVQYVSFVSARSSRLTTSFFEIYSLKSNSWRMIDMDNDLSHWGYFYSRAFSGHEVYLDGACHWLVSECINHRRAMTVLSFDLSREVFFTTPVGEQPYAPYADLLCLTVLNGSIALLSNHHDDVVFHISILGELGVSESWIKLYTYGPSPSIQWPPLGFGKMGHLFIRKKDHEIAYVDLSTQIIQEVGITSGKTNYNIGGLYKESLLSSEDQCN 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03754 529 Pfam F-box associated 370 494 IPR006527 -
Vivi5g03754 529 SMART fbox_2 146 186 IPR001810 GO:0005515
Vivi5g03754 529 NCBIfam F-box protein interaction domain 248 462 IPR017451 -
Vivi5g03754 529 SUPERFAMILY F-box domain 144 195 IPR036047 GO:0005515
Vivi5g03754 529 Gene3D - 144 181 - -
Vivi5g03754 529 PANTHER OS02G0783600 PROTEIN 152 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03754 Vivi-Chr5 131256872 131260324 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03754 336 493 Carbohydrate Esterase AT1G25141 25.000 7.52e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03754 - - vvo:131602513 1048.5