Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03751 ATGGATGCCACTACACCCAAGTACTCCAAGAGTAGGTATGAAGAAATTGTGAAGGAAGTTTCATCCTATATAAAGAAGGTTAGATATAACCCAGATAAAATTCCATTTGTTCCCATCTCTGGTTTTGAGCTTGTTACTAAGATTGACAAACGTTCTGGTAAAGAGATAGAGAAGGAGCCCAAGTTCCTAAAGAATGGTGATGCTGATATTATTAAGATGCTTCCCACCAAGCCCATGGTGGTTGAGACTTTCTCTGAATATCCTCCACTCGGACGATTTGCTGTCAGAGACATGCGTCAAATTGTGGCTGTTGGAGTTATCAAGGCTGTGGAGAAGAAGGATCCAAGTGCATCTAAGATTACCAAGTCAGCACTCAAGAAGAAATGA 387 0.4109 MDATTPKYSKSRYEEIVKEVSSYIKKVRYNPDKIPFVPISGFELVTKIDKRSGKEIEKEPKFLKNGDADIIKMLPTKPMVVETFSEYPPLGRFAVRDMRQIVAVGVIKAVEKKDPSASKITKSALKKK 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03751 128 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 42 110 IPR009001 -
Vivi5g03751 128 Gene3D Translation factors 37 111 - -
Vivi5g03751 128 Pfam Elongation factor Tu C-terminal domain 42 110 IPR004160 -
Vivi5g03751 128 PANTHER ELONGATION FACTOR 1 ALPHA 43 128 - -
Vivi5g03751 128 FunFam Elongation factor 1-alpha 37 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03751 Vivi-Chr5 131191380 131191766 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03751 1 67 Eukaryotic Initiation Factors Gene Family AT1G07930 64.179 2.14e-22 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03751 K03231 - vvo:131640469 248.44