Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03743 ATGCCAGGAACCGAAGTTGATGTTGCTCCGAAGACACGCAAGCGAAATTCAGATTCACCAGGAGATTCACTTGTTGGTTCAAATAGTAAAGAGCATACTGCAAAGATGCTGCTCCGTTTACAGGAACCAAATGATTTATGCCGGACGAGCACTCATGTCAAAGGTGTTGAGCTTCATGTAGGGCTTACTCCGGTTGCTTTTGTTCATCCAGAAACAGCCAAGCGGTTCTCGTTTAACGTGCTTCAGTTGGTTTCCATAGTGCCGAGAGTATCCAAAGAGAATGTTAATAATTCTAGAACCAAATCAAACATTATGAAAGGCAAAGGTGGATCAGCGGTTAATCAAGTTGAGAATGGAGATACGGACAAGAAGGAACATCGACAAGCAATTGTTCATCTGTTGGTTTCAGAATCTGTGGCTAAAGGACATGTAATGCTAGCTAAGTCTCTTCGTCTTTATTTGAGAGCTAGCCTGCATTCATGGGTTTATTTGAAGGCATGTGATGTTATTTTGGAAAAAAGCATTCCTTCCATTTCTCTTTCTCCTTGTCGATTCAAACTGTTAAGGCAGGAGAGCAATGTTGTGAAAGATGGTCTAAATGATTTTCACGGCCACAGGAATCACATTGATGAAAAATTGCGTGGAAAAGCTACTTCAGGTGTCTCTTTGGATACTCTAAATTGGTCGATCCACAATGAAGTTGTTGCAGCTCTCTCTGATGAATCTAATAACAAAGCAGAGGAAGAGGTTGCAAGCCAATCTCAGAATCAAAAGGGATTACAAATTCTTGTACGACTATGGTATATTGCCCAGCTTGAGGCAATTTCTTCCATTATGGGGGTGGAAGTTAATTCATTGGTTATCGGTAGTAAAACCTTGCTTCATTTTGAGTTAAGCTGTTACAAGAATGGGAGTGATGAAAAACTTCAGCTGACTTCTTCAGGAAACATTGGCAAGGCAGTTGAAATGTTATTTTTATTAACCTTTGGTGAAGAAGATCTGCATCATGGGAAACTTACTGCATATGAAGTCTCACTTGGTGGAAAACTCAATAACATCAACATTGAGGATCTGAAGCTTTTTGAAAGAGTGAAATTGGGCGATCCTGTTTCTCTTCGTTTTATAGAAGAGAGAGCCTCCGAAGACCATATTAGTTCAAATGTATCTTTCCTTGGCTGGATGGAGAAAACTGCTTCTGATGTTATCAATAGGATGTTGGTATTATTATCTTCAGCATGTGGTGTGTGGTTTGGCTCATGCAACCTGCCGCTTCCTGGACATGTTCTAATATACGGACCTCCGGGCTCTGGGAAAACTATACTAGCAATGAATGTGGCAAAATCCCTTGAGAATCGCGAAGACATCTTAGCACACATAATTATTGTTTCCTGCTCAAAACTTGCTCTGGAGAAGGTCTCAATTATTCGCCAAGAACTTGCAAGCCATATGACTGAAGCTATAAATCATGCACCTTCTGTTGTCATCTTTGATGATCTTGATAGTATAATTTCTACCCCTGATTCTGAAGGATCTCAGCCATCAATGTCTGTTGCTGGACTCACAGATTTTCTTGCTGACATTGTAGATGAATATGGGGAGAAGAGGCGGAAATCATGTGGATTTGGACCAATAGCTTTCATAGCGACCATACAGTCCCTAGAGAATATGCCCCAATCTTTGAGCTCTTCAGGACGGTTTGACTTTCATATTAAGCTGCCTGCTCCTGCAGCTTCTGAGCGCAAGGCTATGTTGAAGAATATAATACAAAGGCGACACTTGCAATGTAATGATGACATCCTACTTGATGTGGCTGTAAAATGTGATGGTTATGATGGCTATGATCTGGAAATATTAGTTGACAGAACTGTCCATGCTGCTGTTCGCCGTTTTCTGCCATCTAATGCCATTTATGAGCATGAGGGTCCTGCTTTACTACAGGAGGATTTCTCTCAGGCAATGCATGATTTTCTCCCGGTTTCAATGCGTGACATCACAAAGTCTGTTTCTGATGATGGCCGTTCTGGATGGGACGATGTTGGCGGTCTAGTTGATATTCGAAATGCTATTAAAGAGATGATAGAATTGCCATCAAAGTTTCCAAAAACTTTTGCACAAGCACCATTAAGGTTGCGGTCAAATATCCTTTTATATGGTCCTCCCGGTTGTGGCAAAACTCACTTAGTTGGTGCTGCTGCGGCTGCTTCTTCACTTCGATTCATATCAGTGAAAGGGCCAGAACTGTTAAACAAATACATTGGTGCTTCTGAACAAGCTGTTAGAGATATATTCTCCAAAGCTGCTGCTGCAGCACCATGCCTACTTTTTTTTGATGAATTTGATTCTATTGCTCCTAAGAGAGGGCACGACAATACTGGAGTAACTGATCGTGTTGTCAATCAATTTTTGACTGAATTAGACGGTGTTGAGATTTTAGCGGGTGTTTTTGTGTTTGCTGCAACCAGTAGACCCGACTTACTGGATGCGGCACTGTTGAGACCGGGTAGGTTAGATCGTCTTCTATTTTGCGACTTTCCATCATGGCACGAGAGATTGGAAATTCTTACAGTACTTTCTAAAAAGTTACCAATGGCCAGTGATATTGATTTGGCTACAGTAGCTAATGTGACTGAAGGATTCAGTGGAGCTGATCTCCAAGCTCTCCTCTCAGATGCACAACTTGCTGCAGTTCATGATATTCTTGACAATATCGATACGTCTGGGTCAGAGAAAACACCAGTTATTACCGATGCTCTTCTAACGCTCACTGCATCCAATGCCAGACCTTCTGTTTCAGAAGAAGAGAAAAGACGACTCTACAGTATATATCGCCAGTTCCTGGATTCCAAGAGATCTGTTGCTGCCCAGTCAAGGGATGCAAAAGGCAAGAGGGCAACTCTAGCGTGA 2904 0.4184 MPGTEVDVAPKTRKRNSDSPGDSLVGSNSKEHTAKMLLRLQEPNDLCRTSTHVKGVELHVGLTPVAFVHPETAKRFSFNVLQLVSIVPRVSKENVNNSRTKSNIMKGKGGSAVNQVENGDTDKKEHRQAIVHLLVSESVAKGHVMLAKSLRLYLRASLHSWVYLKACDVILEKSIPSISLSPCRFKLLRQESNVVKDGLNDFHGHRNHIDEKLRGKATSGVSLDTLNWSIHNEVVAALSDESNNKAEEEVASQSQNQKGLQILVRLWYIAQLEAISSIMGVEVNSLVIGSKTLLHFELSCYKNGSDEKLQLTSSGNIGKAVEMLFLLTFGEEDLHHGKLTAYEVSLGGKLNNINIEDLKLFERVKLGDPVSLRFIEERASEDHISSNVSFLGWMEKTASDVINRMLVLLSSACGVWFGSCNLPLPGHVLIYGPPGSGKTILAMNVAKSLENREDILAHIIIVSCSKLALEKVSIIRQELASHMTEAINHAPSVVIFDDLDSIISTPDSEGSQPSMSVAGLTDFLADIVDEYGEKRRKSCGFGPIAFIATIQSLENMPQSLSSSGRFDFHIKLPAPAASERKAMLKNIIQRRHLQCNDDILLDVAVKCDGYDGYDLEILVDRTVHAAVRRFLPSNAIYEHEGPALLQEDFSQAMHDFLPVSMRDITKSVSDDGRSGWDDVGGLVDIRNAIKEMIELPSKFPKTFAQAPLRLRSNILLYGPPGCGKTHLVGAAAAASSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEILAGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSKKLPMASDIDLATVANVTEGFSGADLQALLSDAQLAAVHDILDNIDTSGSEKTPVITDALLTLTASNARPSVSEEEKRRLYSIYRQFLDSKRSVAAQSRDAKGKRATLA 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03743 967 FunFam Nuclear valosin-containing protein-like 672 850 - -
Vivi5g03743 967 Pfam ATPase family associated with various cellular activities (AAA) 714 841 IPR003959 GO:0005524|GO:0016887
Vivi5g03743 967 Pfam ATPase family associated with various cellular activities (AAA) 428 573 IPR003959 GO:0005524|GO:0016887
Vivi5g03743 967 Gene3D - 576 669 - -
Vivi5g03743 967 ProSitePatterns AAA-protein family signature. 814 832 IPR003960 GO:0005524|GO:0016887
Vivi5g03743 967 CDD RecA-like_PEX1_r2 685 842 - -
Vivi5g03743 967 MobiDBLite consensus disorder prediction 1 29 - -
Vivi5g03743 967 Gene3D - 845 924 - -
Vivi5g03743 967 SMART AAA_5 710 846 IPR003593 GO:0016887
Vivi5g03743 967 SMART AAA_5 424 576 IPR003593 GO:0016887
Vivi5g03743 967 Gene3D - 675 936 IPR027417 -
Vivi5g03743 967 FunFam Peroxisome biogenesis protein 1 381 575 - -
Vivi5g03743 967 Pfam AAA+ lid domain 866 905 IPR041569 -
Vivi5g03743 967 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 416 658 IPR027417 -
Vivi5g03743 967 PANTHER AAA-FAMILY ATPASE 53 943 - -
Vivi5g03743 967 Gene3D - 378 575 IPR027417 -
Vivi5g03743 967 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 676 932 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03743 Vivi-Chr5 131032851 131044379 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03743 708 913 Calmodulin-binding Proteins AT3G56690 38.571 2.21e-37 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03743 K13338 - gmx:100803882 1573.14