Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03728 ATGTGTGGAATCGCTTTGACCGTCTCAGGCATTCGCATCAACATCTCATCTTTCAATTCAACTCGCTCACATAGCCACACCGAAAATTTGCAGTTCTCTGTAGATGATCTGAAAGCAGCTCTGCGGAGAAGAGGTCCTGATAGCTTGGGTGTGAAGAAAGTTACTCTGCAACACAGTGAAAACCAAATCTCATCCTTCATAGAACACGATGAAACGTTGTTATGTTCTGGGAATGATGAAAGTAACGGTGAACTTCATTTTATTGGTTCAACTTTGCAGCTTAGGGGAACTGTTCCGCTTGTTCAGCCTTTAGTGGATGCTTCTCGAAACATTCTTGTCTATAACGGTGAGATATTTGGAGGACTTGAACTTGCTAGTGATTGCAATGATGGCGAATTTCTAATGCAGACGCTCGGAAATTGTTGCTCCTGTGGTTCTTGTGTGACTGGTTACTGTGTTGAATGTGGGAAAAGTTCTATTACAGATGTTCTTTCTACGATTAAGGGACCATGGGCTATCGTCTATTGGCAGGATAGTTCAAGGACACTTTGGTTTGGACGAGATGCGTTTGGTAGGAGGAGCCTCCTTGTTCACTGGCCTACAGAAGAGGATTCAGCTTTTCTTCTTTCTTCTGTATCACCGGTTTCTCCTGCTCAGGAAGTCTCTGAAAATGAAGCTCATAATGGAATAGAATATATCAATTATTGGGAAGAGCTACCATGTGGAATATATAGTATGCACGTGGATGCTTCAAATTCAAATGGATTTCTAGTTGGCGAAGTCCAGATACATGAATATACAAACTCAATATTAAAGGAGCTTATCAAGTGGGAGAGAATTTCTGTCGAACCAAGCTCTGAAAACCTGCACATATCTCATCCTAAGCTTTCGAGGAGGCAACAAGATGTACATTCAGCTACTTTAGACTCAGTTTCACGTGAAGCAGGCTCAACTCAAACTGCAATTCCAATGCAAGCTCGTATGCTGCTAAATGTTTTAAAGGAATCTGTGAAACGGCGTACGTCACTGTATACTATCTATCAGGAAGTGATATCTGGTATCAGACAAGAGAAATTTGTTCCTGTTGCAATTCTTTTTTCTGGTGGGCTGGATTCTATGATACTTGCCGCATTATTGGATCAATGCTTGGATCCCAGTTATGAAATTGATCTATTAACTGTAAGCTTTGATGGTGAGTTAGCTCCGGATAGAAAATCTGCCAAGGCAGGGTTGAAAGAGCTAAAGAGAGTTGCACCTTCCAGAAGGTGGAGGCTCGTAGAGATTGATGCTGACTTGTCAGACTTGGTATTTGAAACTAGCCATGTTATGTCACTCATAAATCCTGCCAACACCTACATGGACCTTAACATTGGAATAGCTTTATGGCTCGCTTCTGGTGGTAATGGATGGGTGTCTGATACAGATGATAATGATGACACTCATGCACGGATTAAGTACAAGTCCAATGCAAGGATTCTTCTTGTTGGTTCTGGTGCTGATGAACAGTGTGCTGGTTATGGGAGACATAGAACAAGTTTTAGACGAGGAAGTTGGCTGGGGTTAAACGAGGAAATGAAACTCGATATGCAAAGAATTTGGAAAAGAAATTTAGGGAGAGATGATAGATGTATTGCAGATAACGGAAAGGAGGCTAGATTCCCATTCTTGGATGAGGATGTTATAAGGTTGTTACTCGACTTTCCATTGTGGGAGGTTGCCAACCTTGATCAACCTAGTGGCACTGGTGATAAAAAGATTTTAAGAGAGGTTGCGGAGTTGCTTGGTTTATATGAAGCAGCAGTTCTTCCCAAACGAGCAATCCAGTTTGGTTCTAGAATTGCGAGGGAATCAAATCGGAAGAATTTTGGAAGTAATCGAGCAGCAAATCAGGCATCTGCAGGGAGTGTAAAGATTTGTAGGAAATCCAATTTTAGTTGA 1938 0.4169 MCGIALTVSGIRINISSFNSTRSHSHTENLQFSVDDLKAALRRRGPDSLGVKKVTLQHSENQISSFIEHDETLLCSGNDESNGELHFIGSTLQLRGTVPLVQPLVDASRNILVYNGEIFGGLELASDCNDGEFLMQTLGNCCSCGSCVTGYCVECGKSSITDVLSTIKGPWAIVYWQDSSRTLWFGRDAFGRRSLLVHWPTEEDSAFLLSSVSPVSPAQEVSENEAHNGIEYINYWEELPCGIYSMHVDASNSNGFLVGEVQIHEYTNSILKELIKWERISVEPSSENLHISHPKLSRRQQDVHSATLDSVSREAGSTQTAIPMQARMLLNVLKESVKRRTSLYTIYQEVISGIRQEKFVPVAILFSGGLDSMILAALLDQCLDPSYEIDLLTVSFDGELAPDRKSAKAGLKELKRVAPSRRWRLVEIDADLSDLVFETSHVMSLINPANTYMDLNIGIALWLASGGNGWVSDTDDNDDTHARIKYKSNARILLVGSGADEQCAGYGRHRTSFRRGSWLGLNEEMKLDMQRIWKRNLGRDDRCIADNGKEARFPFLDEDVIRLLLDFPLWEVANLDQPSGTGDKKILREVAELLGLYEAAVLPKRAIQFGSRIARESNRKNFGSNRAANQASAGSVKICRKSNFS 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03728 645 Pfam Glutamine amidotransferase domain 102 211 IPR017932 -
Vivi5g03728 645 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 250 IPR017932 -
Vivi5g03728 645 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 16 232 IPR029055 -
Vivi5g03728 645 PANTHER ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1 1 630 - -
Vivi5g03728 645 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 34 211 IPR029055 -
Vivi5g03728 645 Gene3D HUPs 318 642 IPR014729 -
Vivi5g03728 645 CDD Asn_Synthase_B_C 332 610 IPR001962 GO:0004066|GO:0006529
Vivi5g03728 645 Pfam Asparagine synthase 518 609 IPR001962 GO:0004066|GO:0006529
Vivi5g03728 645 Pfam Asparagine synthase 356 414 IPR001962 GO:0004066|GO:0006529
Vivi5g03728 645 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 348 630 - -
Vivi5g03728 645 CDD Gn_AT_II_novel 1 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03728 Vivi-Chr5 130829695 130837567 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03728 - - gmx:100801355 1001.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03728 5 130829695 130837567 Vivi5g03728 5 130829695 130837567 ECH