Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03702 ATGGTTGCAGTGTTTTCCCTCGCAATCGCATTGCCGAAATTGAAGGTCGTAGCTGAAGCTGAAGTTGACGCATTCCCTTCCTTTCTTCCCAAAGACGTCAACAGAATCAAAGACCCGTTCGCTCGAACCCTCGCCACGCGGATTCAAAGACTTCCCGTATCCGTAAAGTTCTCTGAAAACCCCATCATGAGTAGTTGTGTGAAGCCACTGATTCAGACTAAGGCAAATCCAGTTGTCCTTTTACACGGTTTCGACAGCTCATGCTTAGAATGGAGATACACATATCCATTGCTTGAGGAAGCCGGTCTTGAGACATGGGCCATTGACATTCTCGGTTGGGGATTTTCTGATCTAGAGAAACTTCCTTCATGCAATGTGGTATCAAAGCGTGAACACTTTTATCAGTTTTGGAAGTCCTACATCAAAAAGGCGATGATATTGGTTGGTCCAAGCCTTGGTTCTGCGGTTGCCATTGATTTTGCAATTAATCATCCAGAAGCTGTGGAAAAGCTTATTTTAATGGATGCTAGTGTATATGCAGAAGGGACAGGAAACCTAGCAACCTTACCTCGATCGGTAGCTTATGCTGGGGTATACTTGTTAAAGAGCATCCCGTTACGCTTATACGCAAACTATTTGTCCTTCACAAATATATCTTTCAGCACCGCCCTTGATTGGACTAATGTGGGCCGCTTGCATTGTTTATTGCCTTGGTGGGAGGATGCCGCGGTTGATTTTATGACTAGTGGTGGCTACAATGTTACTTCCCAGATAAAAATGGTAAAGCAGAAAACGCTCATAATTTGGGGGGAGAATGACCGCATTATCAGCAATAAACTCGCAGTGCAACTGCACTGTGAATTACCCGATGCTATCATACGCCAAATACCCGAATGTGGTCACATTCCTCATGTTGAAAGACCTGATTCTGTTGCAAAACTCATAACGGAATTTGTTGAGACGGGTACCAGGGCAGTAAATCAATGTGCTCCATCATTATGA 1002 0.4431 MVAVFSLAIALPKLKVVAEAEVDAFPSFLPKDVNRIKDPFARTLATRIQRLPVSVKFSENPIMSSCVKPLIQTKANPVVLLHGFDSSCLEWRYTYPLLEEAGLETWAIDILGWGFSDLEKLPSCNVVSKREHFYQFWKSYIKKAMILVGPSLGSAVAIDFAINHPEAVEKLILMDASVYAEGTGNLATLPRSVAYAGVYLLKSIPLRLYANYLSFTNISFSTALDWTNVGRLHCLLPWWEDAAVDFMTSGGYNVTSQIKMVKQKTLIIWGENDRIISNKLAVQLHCELPDAIIRQIPECGHIPHVERPDSVAKLITEFVETGTRAVNQCAPSL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03702 333 PANTHER HYDROLASE 20 320 - -
Vivi5g03702 333 Pfam Alpha/beta hydrolase family 78 313 IPR000073 -
Vivi5g03702 333 SUPERFAMILY alpha/beta-Hydrolases 76 320 IPR029058 -
Vivi5g03702 333 PRINTS Epoxide hydrolase signature 296 318 IPR000639 GO:0003824
Vivi5g03702 333 PRINTS Epoxide hydrolase signature 82 100 IPR000639 GO:0003824
Vivi5g03702 333 PRINTS Epoxide hydrolase signature 102 117 IPR000639 GO:0003824
Vivi5g03702 333 PRINTS Epoxide hydrolase signature 161 174 IPR000639 GO:0003824
Vivi5g03702 333 Gene3D alpha/beta hydrolase 69 323 IPR029058 -
Vivi5g03702 333 PRINTS Alpha/beta hydrolase fold signature 161 174 IPR000073 -
Vivi5g03702 333 PRINTS Alpha/beta hydrolase fold signature 265 279 IPR000073 -
Vivi5g03702 333 PRINTS Alpha/beta hydrolase fold signature 147 160 IPR000073 -
Vivi5g03702 333 PRINTS Alpha/beta hydrolase fold signature 102 117 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03702 Vivi-Chr5 130579488 130583578 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03702 78 319 Miscellaneous Gene Families AT1G52750 22.878 1.40e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03702 - - mtr:11443399 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03702 5 130579488 130583578 Vivi5g03702 5 130579488 130583578 ECH