Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03665 ATGGCTTGTAGTATCCTCCAAAGTGGCTCTTCTCCTAAGGTGACATGGAAATATGATGTGTTTGTGAGCTTTAGAGGCGAAGACACACGCAACAATTTCGCTGATCATCTTTTTGGTTCTCTCAGTAAAAAGAACATTGTTGTCTTCAGAGATGATACACAAATCAAGAAAGGGGAACATATATCATCTGAGCTTCAACAGGCCATTGAAGGTTCCCATATTTTAATTGTTATCTTCTCAAGAAACTATGCTTCTTCCACATGGTGCTTGCAAGAACTCGCAAAAATTGTTGATTGCATTCAAGTATCAGGACAAACTGTTCTACCTATTTTCTATGATGTTAGTCCATCTGATGTAGGGAAGCAAAGGGGAAATTATGAAAACGCCTTTCGTGAGCATGAAGAAAGATTCAAAGCAAATTTAGAGGTAGTGCAAAGATGGAGGGAGGCCTTAATACACGTAGCCAAACTCTCTGGTTGGGATGTAAGGGACAAGCCACAATATGCAGAGATTGGAAATATTATTAAAGAGGTAACATGCTTATTGGGAAACAAATCTTCAAGTTTACCCGGCGATATAGTTGGGATGAACTCACCAATGGAAGAACTAGAAAAGCTTCTAAATTTGGACTCAAATGACGATGTTCGAGTTGTAGGGATTTGTGGAATGCCTGGAATAGGAAAGACAACTCTGGCTACTGCTTTGTATGCCGAATTCTCTAATCAATTTGATGCTTGCTGCTTTATTGTTGATGTAAGTAAAACTTATGGAGACCATGGCTCAATTGGAGTACAAAAGCAACTTCTATGTCAAACTCTGAAAGAAGAAAATCTTCAGATACACAATCTTTCTATGGGTTCAAATTTGATCCAAACTAGGCTATGTCAAATGAAATCCCTTGTTGTTCTTGACAATGTTGATAAAGCTGAACAACTGGATAAATTGGATATGAAACGAGAATGGCTAGGGACAGGGAGCAGAATAATCATAATTTCTAGAAATTGGCATATCTTAAGAGAGCATGGAGTAGATGAAGTATACAGAGTTCGACTCTTGGATCGTAATAATGCCCTTCAACTTTTTTGCAGGAAAGCTTTCAAAAGTGATGATATCATGAGTGATTACATACACTTGACAGATGAGGTACTAACATATGCCAATGGCCTTCCATTAGCAATTAAAGTGTTGGGCACATTTTTGTATGGTCGAGATGTCTCTGAATGGAGAAGTGCATTGGCACGATTAAGGGAGAATCCAAATTTAGATATTATGGGTGTGCTCCGAATTAGTTTTGATGGACTAGATGATACAGAAAAGGATATATTTCTAGATATTGCTTGTTTTTTTAATAAAAAAGAGGAGACATACGTGAAGAGAGTTTTAGATTTTCGTGGGTTTCATCCTGAAATTGGTTTAAGAGTTCTCATTGATAAATCATTCATAACCTGTGAGAAGGGGAGAATTTTTATGCATGATTTGTTCAAGGAACTGGGCAAGAGTATCGTTAGAGAAAAATCACCTAAAGAACCAAGAAAGTGGAACAGGATTTGGGACTACAAAGATGTCCACAATGTTGTCTCAGAAAACATGGCAACAGGAAACCTTGAAGCCATGATTTTGAGGCGTTATCCAGAAAATATTGAAGAAATACAGGATATGACAACATTAAAGGCTGAAGCTTTAGCACAAATGAGACGCCTTAAATTGCTCATGCTGTGGAATTTGAATTTCTCAGGAAGTCTCAATTTTCTTTCAAGTGAATTGGGGTATCTTTGTTGGGACAAATACCCTTTCACTAGTTTGCCATCAAGTTTTCAACCAAATAAACTTGTTGAACTGATTCTACCTCACAGCAACATCAGGCAACTATGGGAGGGAAGAAAGCCTCTACACAATTTGACACGGATTGATCTCTCTCACTCGAAAAATCTTATAATGATGCCAAGTTTTTTGGAGATTCCAAATCTTGAGTTGCTAGATCTTGAAGGGTGTATAAAACTCATGCAGATTGATCCATCCATTGGTTTTCTAGAAAGGCTTTTCAAATTAAATTTGAAAAATTGTAAAAATCTGGTCAGTATTCCTAACAACATTTTTAGTATGAGTTCTCTCAAGCATCTAAATCTCTCTGGCTGTCCAAAATTACTCAATAATCAGCTGTTAGGAAGACAAAGACAAATAGAGCAATTGGATAACAAGGAAACTGCCACCCAATACCAGTCGACATCACGCATCCTCAAAGTTCTAAAGCCATCCTTTCGATTTTCGTTTTTTCAAAAACATGATGATTCTGTTGGTTTAATGTTACCTTCGTTGTCTCGTCTGTCGCGTTTGCAATATCTTGATTTAAGCTTCTGCAATCTTTTTCAAATCCCTAATGCTATTGGGCTGTTACATTCCTTAGAAATCCTAAACCTGGGGGGAAACAACTTTGTGACACTACCTTCTAGCATCAAGGAACTTTCCAAACTTAGACAATTGAACTTGGAGCATTGTAAGAAGCTGCAATTTTTTCCTGAGCTCCCATCAAATACTATTTTGCCAGTAAGAAAAACATTTTTTGGTAGATATGTAGCTGGATTATATATATTCGACTGCCCCAGTTTAATTGATATGGAATGCTGTTATAGAATGGCTTTTTCTTGGATGATACAACTCCTTCAGGTGCACATGCAATCTGATCTTCCAATGGGTCAGATTGATATTGTTATTCCCAGAGCTCAAATTCCAGTATGGTTTAGCAAACAAAATGCGGGCAGTTCGATAAGCATGGATCCATCACCTATTATGGATGACAAGAATTGGATAGGTGTTGCTTGTTGCTTAACATTTGTAGCGCATGATGATCCAACTAATTTAGGTGAAGGATTGTCGCCTCATATTGGGTTTGGTTTTCAAAATAAGCAACGCGGGCGCTTTCCGGTTATTCCCATACATCTTGAAAAAGATCTGGTTACCGTTGAGTTGGATCACTTTTTGCTCATTTTTTTCACTAAGGAAGAGTTTATTGATTATTATGTGAGTTATATAACAAAGGGATTGCATGATATTAGTGGTATTGAATTGACAGCTATTGTGGAGCAGCCCATTGGTTTGCACTTAGAGGTTAAAAATTGTGGTTATCGCTGGATAATTAAGGAGGATCTGGAACAGTTAATCCCACAAACAATTTACAGTGGAAGTGGAAATTCATCAGTTCAAATCAAGTATGTAACAAATGATTAG 3225 0.3733 MACSILQSGSSPKVTWKYDVFVSFRGEDTRNNFADHLFGSLSKKNIVVFRDDTQIKKGEHISSELQQAIEGSHILIVIFSRNYASSTWCLQELAKIVDCIQVSGQTVLPIFYDVSPSDVGKQRGNYENAFREHEERFKANLEVVQRWREALIHVAKLSGWDVRDKPQYAEIGNIIKEVTCLLGNKSSSLPGDIVGMNSPMEELEKLLNLDSNDDVRVVGICGMPGIGKTTLATALYAEFSNQFDACCFIVDVSKTYGDHGSIGVQKQLLCQTLKEENLQIHNLSMGSNLIQTRLCQMKSLVVLDNVDKAEQLDKLDMKREWLGTGSRIIIISRNWHILREHGVDEVYRVRLLDRNNALQLFCRKAFKSDDIMSDYIHLTDEVLTYANGLPLAIKVLGTFLYGRDVSEWRSALARLRENPNLDIMGVLRISFDGLDDTEKDIFLDIACFFNKKEETYVKRVLDFRGFHPEIGLRVLIDKSFITCEKGRIFMHDLFKELGKSIVREKSPKEPRKWNRIWDYKDVHNVVSENMATGNLEAMILRRYPENIEEIQDMTTLKAEALAQMRRLKLLMLWNLNFSGSLNFLSSELGYLCWDKYPFTSLPSSFQPNKLVELILPHSNIRQLWEGRKPLHNLTRIDLSHSKNLIMMPSFLEIPNLELLDLEGCIKLMQIDPSIGFLERLFKLNLKNCKNLVSIPNNIFSMSSLKHLNLSGCPKLLNNQLLGRQRQIEQLDNKETATQYQSTSRILKVLKPSFRFSFFQKHDDSVGLMLPSLSRLSRLQYLDLSFCNLFQIPNAIGLLHSLEILNLGGNNFVTLPSSIKELSKLRQLNLEHCKKLQFFPELPSNTILPVRKTFFGRYVAGLYIFDCPSLIDMECCYRMAFSWMIQLLQVHMQSDLPMGQIDIVIPRAQIPVWFSKQNAGSSISMDPSPIMDDKNWIGVACCLTFVAHDDPTNLGEGLSPHIGFGFQNKQRGRFPVIPIHLEKDLVTVELDHFLLIFFTKEEFIDYYVSYITKGLHDISGIELTAIVEQPIGLHLEVKNCGYRWIIKEDLEQLIPQTIYSGSGNSSVQIKYVTND 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03665 1074 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 717 IPR044974 GO:0006952
Vivi5g03665 1074 SMART AAA_5 214 353 IPR003593 GO:0016887
Vivi5g03665 1074 SMART till_3 17 157 IPR000157 GO:0007165
Vivi5g03665 1074 Pfam Leucine rich repeat 776 833 IPR001611 GO:0005515
Vivi5g03665 1074 PRINTS Disease resistance protein signature 386 400 - -
Vivi5g03665 1074 PRINTS Disease resistance protein signature 217 232 - -
Vivi5g03665 1074 PRINTS Disease resistance protein signature 819 835 - -
Vivi5g03665 1074 PRINTS Disease resistance protein signature 293 307 - -
Vivi5g03665 1074 Gene3D - 185 345 IPR027417 -
Vivi5g03665 1074 Gene3D - 351 435 IPR042197 -
Vivi5g03665 1074 Gene3D Ribonuclease Inhibitor 520 743 IPR032675 -
Vivi5g03665 1074 Pfam TIR domain 17 160 IPR000157 GO:0007165
Vivi5g03665 1074 Pfam Leucine Rich Repeat 609 626 IPR011713 -
Vivi5g03665 1074 SUPERFAMILY L domain-like 556 857 - -
Vivi5g03665 1074 SMART LRR_typ_2 775 797 IPR003591 -
Vivi5g03665 1074 SMART LRR_typ_2 677 701 IPR003591 -
Vivi5g03665 1074 SMART LRR_typ_2 798 821 IPR003591 -
Vivi5g03665 1074 Gene3D Ribonuclease Inhibitor 762 892 IPR032675 -
Vivi5g03665 1074 Pfam Leucine Rich Repeat 703 718 IPR001611 GO:0005515
Vivi5g03665 1074 Gene3D - 13 184 IPR035897 -
Vivi5g03665 1074 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 184 - -
Vivi5g03665 1074 Pfam NB-ARC domain 208 417 IPR002182 GO:0043531
Vivi5g03665 1074 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 160 IPR035897 -
Vivi5g03665 1074 SUPERFAMILY "Winged helix" DNA-binding domain 422 526 IPR036390 -
Vivi5g03665 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 445 IPR027417 -
Vivi5g03665 1074 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Vivi5g03665 1074 ProSiteProfiles Leucine-rich repeat profile. 777 798 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03665 Vivi-Chr5 129972041 129976574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03665 18 827 WRKY Transcription Factor Family AT4G12020 30.346 4.02e-90 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03665 - - psat:127106907 1534.62