Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03638 ATGGTTGGGGGTGGAAATGGAGAGTGGCCTGGTGGAGGGTTTAGTCCGGGACCGATGACTCTGATTTCGAACTTGTTTGGAGACAACGATGACTGTAAGACATTCTCAGAGCTTCTCGCCGGTGCTATGTTGGATGTGGAGCATGCAGGAGGAAGAGGTGGCGGTGGCTTGTCACCGATGGCCATGTTTAGTTCTCAACCTCAGCAATCACTAGCACAATCCTATTCAAATGTTCAAACCCAATCTGAACATTCATTTTCTGCATCAATAGTGCCTACAAACACCTCATCAACACAACTTCAAGCAGTTACATTCAACAACATTGCTCAACAACACATACCAAACTCTAAGGAACCAATAGCAAAATCTCTTGATTATTCTTCAAACTCCGAACAAACATCACACCAGTCTTGTTCTGTGAATGTCGATAAAGCTAACGACGACGGCTACAACTGGAGAAAGTATGGACAGAAACAAGTTAAAGGTTGCGAGTTTCCTCGAAGTTATTACAAGTGTACACATCCGAGTTGTCCGGTGAAGAAAAAAGTCGAACGCGATCTTGTTGATGGACATGTAACTCAAATTATTTACAAAGGAGAGCACATTCATGAACGTCCTCGTCCAAGCAAGCTCACAAAAGATAATTCAAATGTGCAACAAGAGTTGTTAGGAGCAAGTGACAGTGACGAAGAAAAAGAGCATGAAACTGAGAAAAATTATGAACCTGATCACAAAAGAAGGAGTACTGTCTCAAAGCCTAGAATCGTTGTGCAAACAACAAGTGATGTGGATCTGTTAGAGGATGGATATAAATGGCGCAAATACGGGCAGAAGGTTGTGAAAGGAAATCCACATCCAAGGAGCTATTACAAATGCACCAGCCCGGGTTGCAATGTTAGAAAGCATATTGAGAGGGTTTCAACGGATGCTAAAGCAGTAATGACAACATATGAAGGAAAACATAATCATGATGTGCCAGCAGCTAAGACTAATAGCCACACCCTTGCAAACAATAATAACGCATCACTGATAAAATCACAAAATGTCATACCTGAGTATAGTGTTCAGCAGCAGCAGCCTTCAGCAGTGGCACGTCTAAGGTTGAAGGAAGAACATAGAGTATAG 1125 0.424 MVGGGNGEWPGGGFSPGPMTLISNLFGDNDDCKTFSELLAGAMLDVEHAGGRGGGGLSPMAMFSSQPQQSLAQSYSNVQTQSEHSFSASIVPTNTSSTQLQAVTFNNIAQQHIPNSKEPIAKSLDYSSNSEQTSHQSCSVNVDKANDDGYNWRKYGQKQVKGCEFPRSYYKCTHPSCPVKKKVERDLVDGHVTQIIYKGEHIHERPRPSKLTKDNSNVQQELLGASDSDEEKEHETEKNYEPDHKRRSTVSKPRIVVQTTSDVDLLEDGYKWRKYGQKVVKGNPHPRSYYKCTSPGCNVRKHIERVSTDAKAVMTTYEGKHNHDVPAAKTNSHTLANNNNASLIKSQNVIPEYSVQQQQPSAVARLRLKEEHRV 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03638 374 FunFam WRKY transcription factor 131 207 - -
Vivi5g03638 374 SUPERFAMILY WRKY DNA-binding domain 258 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi5g03638 374 ProSiteProfiles WRKY domain profile. 141 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi5g03638 374 SMART WRKY_cls 146 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi5g03638 374 SMART WRKY_cls 266 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi5g03638 374 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 67 348 IPR044810 GO:0003700
Vivi5g03638 374 FunFam WRKY transcription factor 57 252 326 - -
Vivi5g03638 374 SUPERFAMILY WRKY DNA-binding domain 145 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi5g03638 374 ProSiteProfiles WRKY domain profile. 261 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi5g03638 374 Pfam WRKY DNA -binding domain 267 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi5g03638 374 Pfam WRKY DNA -binding domain 147 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi5g03638 374 Gene3D WRKY domain 127 207 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi5g03638 374 Gene3D WRKY domain 251 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi5g03638 374 MobiDBLite consensus disorder prediction 223 253 - -
Vivi5g03638 374 MobiDBLite consensus disorder prediction 225 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03638 Vivi-Chr5 129568193 129573394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03638 11 39 WRKY Transcription Factor Family AT2G03340 72.414 1.20e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi5g03638 WRKY 3.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03638 - - psat:127106018 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03638 5 129568193 129573394 Vivi5g03638 5 129568193 129573394 ECH