Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03574 ATGAGTTTCATTACTTATATTCTATTTATTCTTTCTCTTAAAGTTTCCAGTTCCATAGCAGGTGATTTCAAATCATCCATTAATGAATCTCAATTCATCAGTGATGGAGAGACCATCGTTTCACCAAATGGATTATTTGAGCTTGCTTTCTTTAGTCTTAAGAATCCAAACAAACGCTACCTCGGAATTCAATTCAAGAATATTTCAATTCAAAATGTTGTCTGGGTTGCAAATGGTGGCCAGCCAATCAACGACTCTTCTGCAGTTTTGACACTAAACAGTTCTGGCAGTTTGGTCCTTACTCACAACAACAACATTGTTTGGTCCACGAATTCTTTCACAAAAGCGCAGAAACCAGTGGCACAACTCTTGGATACAGGTAATCTTGTCATAAAAGAAGATAGCGCCGATGAAACCTATCTGTGGCAAAGCTTTGACTACCCATCTAACACATTGTTGGCAGGTATGAAGTTGGGATGGGACCTTAAAAGAAATTTGAATAGGCGTCTCATAGCATGGAAGAGTGATGATGATCCAACACCAGGAGACTTTACTTGGGGTGTGGTGTTAAATAACTATCCTGAGATCTATATGATGAAGGGAGAAACAAAGTACCACAGACTTGGACCATGGAACGGCTTGCGTTTTAGTGGTATGCCAGAGATGAGGCCTAATCCTGTATTCAGTTACAACTTTGTCTACAATAAAGAAGAGGTTTATTACTCATGGAACAGCAGTGGTAGCTCTCTAATATCAAAAGTGGTACTTAACCAAACCAGTAACGAACGTCCTCGCTATACATGGTCAAAATCTGACAAATCATGGATGCTTCATTCAAACATGCCAGGCGACTATTGTGACCGTTATGGTCTGTGTGGAAACAACGGATATTGCAACATTACTAATTCACCAGTATGTGATTGTTTAAAAGGGTTCACGCCTAAGTTTCCTGAAAAATGGAACTCAATGGACTGGTCCCATGGGTGTGTCAGAAATCCTCCATTGAACTGCACCAGTGATGGATTTATCTCAATGACAGGCTTGAAAGTTCCAGATACTACAAATACTAGCGTGGACAAGAGTATTGGTCTAGAACAATGTAGACACAAATGCTTGAAAAATTGTTCCTGCGTGGCCTATAGAAATATAAATATAAGTGGAGCAGGAAGTGGCTGTGTTATGTGGTTTGGTGAATTAATTGATATCAAACTTTTTCCATTAGGTGATCAAGTTCTATATATCCGAATGCCTGCTTCAGAATTAGGCAAAAATAATACTGAGGTTGAGCACAGGAGGAACCTGAGAAAAAAAGTTGTAATTAGTGTTTCTGCAGCTTTGGGAATGTTTTTACTTGCTATTTACTTTTCCTACAGATTCAGGAGGAGCGTTGTTGGGAAGTCGACGACAGAAGGTGACTATGAAAGACATATGGATGATCAGGATCTGCCCTTGCTCAATTTGTCGACAATTATTATTGCCACTGACAACTTCTCAAAGAAGAACAAAATCGGAGAAGGTGGTTTTGGACCTGTTTATATGGGAAAATTAGGGAGTGGGCTAGAAATTGCTGTAAAGAGACTTTCACAGAGCTCAAAACAAGGGATGAGAGAGTTCATTAATGAAGTAAAACTTATTGCAAATGTTCAGCATCGAAACCTTGTAAAGCTTATCGGCTGTTGCATTCAGAAACACGAAAAATTGCTAGTTTATGAATACATGGCTAATGGTAGCCTAGACTACCTCATCTTTGATCGTACCAAAAGTCAACTGCTAGATTGGCCAAAGCGTTTCGACATAATATGTGGAATTGCTAGAGGGCTTATGTATCTTCATCAAGATTCTCGATTAAGGATTGTGCATAGAGATCTCAAAGCGAGTAATGTTTTACTGGATGATACTATGAACCCAAAAATATCAGATTTTGGAATGGCTAGAACTTTTGGGGGAAACCAAATTGAAGGAAACACAAATAGAATTGTTGGGACATATGGGTACATGGCACCAGAGTACGCTATTGATGGACAATTTTCTTCGAAATCTGATGTTTTCAGCTTTGGTGTTTTAATATTAGAGATTATATGTGGGAAGAAAAATCGAGTGCTTAATCGTGCAAAGCAAACCCTAAACCTTGTTGCTTACGCATGGACATTTTGGAAACACGGAAAAGCTTCTCAACTAATTGACTCGAACATAGAGGATTCATGCATTGTATCAGAAGTATCGCGTTGCATCCACATTGGACTCTTATGTGTGCAACAATACCCAGAAGATAGGCCTACCATGGCTGATGTGATTCTAATGCTAGGGAGTGAAACGGCATTGGATGATCCTAAGGAGCCAAGTTTTATCACAAGAAAGGAATCTACTGAAGCAAATTCGAATTCAAGTGGGAAGGATATAAGTTCAAACTATGAAATGACCATAACTACTTTAAGTGTTCGACTTGAACTTCGAAATGAGGAACAAATTGTGGTTTTTAAAAACTTCCTCATTCTTAACCTTAGACTCAGACACACTAGCAAAATCCAATCATCAATAACCAAATACCAGTGTCATGCAATGGAAATTCTTTCTTTCATAACTATGATGATTGCTTACATGATTGTACCAATTATAGCAACTAACTCCATCAGTGTGTCTGAGTCTTTAAGTGATGGTGAAACTTTAGTTTCAAAAGATGGACAATTTGAACTGGGCTTTTTTAGGCCGGGCAATTCTACAAGACGTTATCTTGGGATTTGGTACAAGCAGGTGCCTAAAACAAAAGTTGTTTGGGTAGCAAATAGGGCCAACGGCATCAACAATACCTTAGGCATCTTAACACTGAGTACCACAGGCAATCTCATACTCCAGCAAAACGAAACTTCTGTTTGGAGTACACCATCAGAAAAACAAGCACAGAAGCCAATAGCAGAGCTCTTGGACAATGGCAATCTTGTGATAAGAAACCAAGGAGAAACAGATCCAGAAGGAGGAACCTACTTGTGGCAAAGCTTTGACTATCCGTGTGATACAATTTTGCCAGGGATGAAGTTGGGATGGGATCTCAAAAATGATTTTGAATGGAGAGTGACTTCTTGGAAGAGTCCTGATGATCCGTCACTGGGAGATCTTTCTTGGAGTCTTGTGCTTCATAATTATCCTGAGTTTTATCTGATGAACGGAACAGAGAAATACTCTCGGATTGGACCATGGAATGGACTTCAAATAAGTGGCCTGCATGGTCTAACACAAACTTCTGTATTTGATTTCAAGTATGTTGCTAATAATGATTTGAATTATGTGTCTAATAAGGATGAGATGTTTTACTCCTTTACCCGCAAGAATTCTTCTGTCATAGTCAATGTTGCGTTACAGCTACGTGCTTTTATCATCTCTGTGTGGTCAGAGCATAAAAAACTTTGGGTCATATATTCAGAGACCCCACTTGACCAGTGTGACATCTATGGAACTTGTGGAGCCAATTCCATGTGCTCAATTGACAAATCACCTTTTTGCGAATGTTTACTTGGGTTCGTTCCAAAGTCAATGCAACAATGGGCCTTATTAGACAGGAGTCAAGGGTGTGTCCGCAACATATCATTAAGTTGCAACAATCCACAAATGGATAAGGATGTGGATGATGAGTTTATCAAATACAGGGGCGTCGTAGTACCAGACACTACACATACTTTATTGGATGAGAATATTGATTTAGAGTTATGCAGAACTATGTGCTTGAATAATTGCACTTGTACAGCTTACACTAATTCAGATATAAGTGGAAAGGGTAGTGGCTGTGTCATGTGGTTTGGTGATCTAATCGACATAAGACAGTTTGACACTGGTGGCCAAGATCTCTATATTCGTATAGCTCACAAAGTAACAAAGGCTTCAAACGGGCACAACAAAAGCGTGATAACCATAGCTACTACCATTGCTGCAGCAATTTCTGGGATGCTTTTATTTTGCATATATGTGATATATAAAGTCCGAAAGAGAATTGCGGATAAATCAAAGACAGAAGATAACATTGAAAAGCATCTACAGGATATGGATTTACCGTTATTTGATCTGCAAACAATTGTTATCGCCACTATCAACTTCTCCTTGAATAATAAGATTGGACAAGGTGGTTTTGGATCTGTATACAAGGGAAAATTAGCAGATGGACAAGAAATTGCGGTTAAGAGACTTTCAACAAACTCTGGACAAGGAATTACCGAGTTCCTAACAGAAGTAAAACTGATTGCAAAACTTCAACACCGAAATCTGGTTAAGCTTCTTGGCTGTTGTGTTGGAGGACAAGAAAAATTGCTAGTATATGAATACATGGCTAACGGTAGCCTTGACTCCTTTATCTTTGATAAAATAAAAGGTAAATTGTTGGAGTGGCCCGAACGCTTCCAAATAATATTTGGAGTAGCTAGGGGACTTGTGTATCTTCATCAAGACTCTCGATTAAGGATTATTCACAGAGATCTCAAAGCAAGTAACGTATTGTTGGATGACAAGTTGAATCCAAAAATATCAGATTTTGGAATGGCCAGATCTTTTGGAGGAGATCAAATTGAAGGAAATACAAATAGAGTAGTTGGAACTTACGGATACATGGCACCAGAGTATGCTGCTGATGGACAATTTTCAATCAAATCAGACGTCTTCAGCTTTGGAGTTTTACTCTTGGAGATTATATGCGGGAACAAAAATAGAGCACTTTATCATGAAAACAAGACACTTAACCTTGTTGGTTATGCATGGACAGTTTGGAAAGAAGGAAAAGCATTGGAGTTGATTGAGTTAAGAATAAAGGAGTCATGTGTTGTGTCAGAGGTATTGAGGTGCATCCATGTGAGTCTGTTGTGTGTGCAACAATACCCGGAGGATAGGCCTACAATGACATCTATAGTTCAAATGCTGGGTAGTGAAATGGAATTGGTTGAGCCTAGAGAGCCAGGTTTCTTTCCGAGGAAAGTTTTTGATGAAGGAATTAAAAATGAAATCAGTTCAAATGAGGAGTTAACCGTTACATCGCTTAATGGTCGATAA 5028 0.3886 MSFITYILFILSLKVSSSIAGDFKSSINESQFISDGETIVSPNGLFELAFFSLKNPNKRYLGIQFKNISIQNVVWVANGGQPINDSSAVLTLNSSGSLVLTHNNNIVWSTNSFTKAQKPVAQLLDTGNLVIKEDSADETYLWQSFDYPSNTLLAGMKLGWDLKRNLNRRLIAWKSDDDPTPGDFTWGVVLNNYPEIYMMKGETKYHRLGPWNGLRFSGMPEMRPNPVFSYNFVYNKEEVYYSWNSSGSSLISKVVLNQTSNERPRYTWSKSDKSWMLHSNMPGDYCDRYGLCGNNGYCNITNSPVCDCLKGFTPKFPEKWNSMDWSHGCVRNPPLNCTSDGFISMTGLKVPDTTNTSVDKSIGLEQCRHKCLKNCSCVAYRNINISGAGSGCVMWFGELIDIKLFPLGDQVLYIRMPASELGKNNTEVEHRRNLRKKVVISVSAALGMFLLAIYFSYRFRRSVVGKSTTEGDYERHMDDQDLPLLNLSTIIIATDNFSKKNKIGEGGFGPVYMGKLGSGLEIAVKRLSQSSKQGMREFINEVKLIANVQHRNLVKLIGCCIQKHEKLLVYEYMANGSLDYLIFDRTKSQLLDWPKRFDIICGIARGLMYLHQDSRLRIVHRDLKASNVLLDDTMNPKISDFGMARTFGGNQIEGNTNRIVGTYGYMAPEYAIDGQFSSKSDVFSFGVLILEIICGKKNRVLNRAKQTLNLVAYAWTFWKHGKASQLIDSNIEDSCIVSEVSRCIHIGLLCVQQYPEDRPTMADVILMLGSETALDDPKEPSFITRKESTEANSNSSGKDISSNYEMTITTLSVRLELRNEEQIVVFKNFLILNLRLRHTSKIQSSITKYQCHAMEILSFITMMIAYMIVPIIATNSISVSESLSDGETLVSKDGQFELGFFRPGNSTRRYLGIWYKQVPKTKVVWVANRANGINNTLGILTLSTTGNLILQQNETSVWSTPSEKQAQKPIAELLDNGNLVIRNQGETDPEGGTYLWQSFDYPCDTILPGMKLGWDLKNDFEWRVTSWKSPDDPSLGDLSWSLVLHNYPEFYLMNGTEKYSRIGPWNGLQISGLHGLTQTSVFDFKYVANNDLNYVSNKDEMFYSFTRKNSSVIVNVALQLRAFIISVWSEHKKLWVIYSETPLDQCDIYGTCGANSMCSIDKSPFCECLLGFVPKSMQQWALLDRSQGCVRNISLSCNNPQMDKDVDDEFIKYRGVVVPDTTHTLLDENIDLELCRTMCLNNCTCTAYTNSDISGKGSGCVMWFGDLIDIRQFDTGGQDLYIRIAHKVTKASNGHNKSVITIATTIAAAISGMLLFCIYVIYKVRKRIADKSKTEDNIEKHLQDMDLPLFDLQTIVIATINFSLNNKIGQGGFGSVYKGKLADGQEIAVKRLSTNSGQGITEFLTEVKLIAKLQHRNLVKLLGCCVGGQEKLLVYEYMANGSLDSFIFDKIKGKLLEWPERFQIIFGVARGLVYLHQDSRLRIIHRDLKASNVLLDDKLNPKISDFGMARSFGGDQIEGNTNRVVGTYGYMAPEYAADGQFSIKSDVFSFGVLLLEIICGNKNRALYHENKTLNLVGYAWTVWKEGKALELIELRIKESCVVSEVLRCIHVSLLCVQQYPEDRPTMTSIVQMLGSEMELVEPREPGFFPRKVFDEGIKNEISSNEELTVTSLNGR 1675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03574 1675 ProSiteProfiles PAN/Apple domain profile. 1197 1285 IPR003609 -
Vivi5g03574 1675 FunFam Os04g0303100 protein 913 1059 - -
Vivi5g03574 1675 CDD B_lectin 880 1002 IPR001480 -
Vivi5g03574 1675 CDD EGF_CA 284 315 - -
Vivi5g03574 1675 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1438 1641 - -
Vivi5g03574 1675 SUPERFAMILY Protein kinase-like (PK-like) 1340 1633 IPR011009 -
Vivi5g03574 1675 ProSiteProfiles Protein kinase domain profile. 1362 1640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g03574 1675 ProSitePatterns Protein kinases ATP-binding region signature. 1368 1390 IPR017441 GO:0005524
Vivi5g03574 1675 SMART blect_4 30 148 IPR001480 -
Vivi5g03574 1675 SMART blect_4 880 1002 IPR001480 -
Vivi5g03574 1675 FunFam Os04g0303100 protein 63 205 - -
Vivi5g03574 1675 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Vivi5g03574 1675 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 573 776 - -
Vivi5g03574 1675 SUPERFAMILY alpha-D-mannose-specific plant lectins 923 1033 IPR036426 -
Vivi5g03574 1675 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 145 - -
Vivi5g03574 1675 Gene3D Phosphorylase Kinase; domain 1 1322 1437 - -
Vivi5g03574 1675 Gene3D Phosphorylase Kinase; domain 1 461 572 - -
Vivi5g03574 1675 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 179 IPR036426 -
Vivi5g03574 1675 SUPERFAMILY Protein kinase-like (PK-like) 481 768 IPR011009 -
Vivi5g03574 1675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Vivi5g03574 1675 Pfam D-mannose binding lectin 923 1028 IPR001480 -
Vivi5g03574 1675 Pfam D-mannose binding lectin 73 174 IPR001480 -
Vivi5g03574 1675 CDD B_lectin 30 148 IPR001480 -
Vivi5g03574 1675 SMART serkin_6 1362 1640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g03574 1675 SMART serkin_6 497 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g03574 1675 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 759 - -
Vivi5g03574 1675 Pfam PAN-like domain 337 402 IPR003609 -
Vivi5g03574 1675 Pfam PAN-like domain 1206 1270 IPR003609 -
Vivi5g03574 1675 CDD PAN_AP_plant 333 417 - -
Vivi5g03574 1675 CDD STKc_IRAK 1368 1633 - -
Vivi5g03574 1675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1483 1495 IPR008271 GO:0004672|GO:0006468
Vivi5g03574 1675 ProSiteProfiles Bulb-type lectin domain profile. 874 994 IPR001480 -
Vivi5g03574 1675 CDD PAN_AP_plant 1195 1285 - -
Vivi5g03574 1675 FunFam receptor-like serine/threonine-protein kinase SD1-8 1333 1437 - -
Vivi5g03574 1675 FunFam receptor-like serine/threonine-protein kinase SD1-8 469 572 - -
Vivi5g03574 1675 Gene3D - 19 145 IPR036426 -
Vivi5g03574 1675 Gene3D - 870 999 IPR036426 -
Vivi5g03574 1675 Pfam Protein tyrosine and serine/threonine kinase 499 765 IPR001245 GO:0004672|GO:0006468
Vivi5g03574 1675 Pfam Protein tyrosine and serine/threonine kinase 1363 1633 IPR001245 GO:0004672|GO:0006468
Vivi5g03574 1675 ProSiteProfiles Protein kinase domain profile. 497 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g03574 1675 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 870 999 - -
Vivi5g03574 1675 Gene3D Transferase(Phosphotransferase) domain 1 1438 1642 - -
Vivi5g03574 1675 Gene3D Transferase(Phosphotransferase) domain 1 573 785 - -
Vivi5g03574 1675 ProSiteProfiles PAN/Apple domain profile. 337 418 IPR003609 -
Vivi5g03574 1675 Pfam S-locus glycoprotein domain 1061 1176 IPR000858 GO:0048544
Vivi5g03574 1675 Pfam S-locus glycoprotein domain 207 316 IPR000858 GO:0048544
Vivi5g03574 1675 ProSiteProfiles EGF-like domain profile. 282 318 IPR000742 -
Vivi5g03574 1675 CDD STKc_IRAK 503 768 - -
Vivi5g03574 1675 SMART ntp_6 1205 1284 IPR003609 -
Vivi5g03574 1675 SMART ntp_6 337 416 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03574 Vivi-Chr5 128388392 128396779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03574 438 782 Receptor kinase-like Gene Family AT4G23230 52.601 1.19e-109 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi5g03574 PK_Tyr_Ser-Thr 1.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03574 - - gmx:100812007 2085.07