Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03545 ATGAGTTTCATTACTTATATTCTATTTATTCTTTCTCTTACAGTTTCCAGTTCCATAGCAGGTGATTTCAAATCATCCATTACTGAATCTCTATTCATCAGTGATGGAGAGACCATCGTTTCACCAAATGGATTATTTGAGCTTGCTTTCTTTAGTCTTAAGAATCCAAACAAACGCTACCTCGGAATTCAATTCAAGAATATTCCAACTCAAAATGTTGTCTGGGTTGCAAATGGTGGCCAGCCAATCAACCACTCTTCTGCTGTTTTGACACTAAACAGTTCTGGCTGTTTGGTCCTTACTCACAATAACAACGTTGTTTGGTCCACAAATACTTCGACAAAACCACTGAAACCAGTGGCACAACTCTTGGATACGGGTAATCTTGTCATAAAAGATATTGTCGACGAAACCTATCTGTGGCAAAGCTTTGACTATCCTTCAAACACATTGTTGGCAGGTATGAAGTTGGGATGGGACCTTAAAAGAAATTTGAATAGGCGTCTCATAGCATGGAAGAGTGATGATGATCCAACACCAGGAGACTTTACTTGGGGTGTCGTGTTGAATAACTATCCTGAGATCTATATGATGAAGGGAGAAACAAAGTACCACAGACTTGGACCATGGAACGGCTTGCGTTTTAGTGGTATGCCAGAGATGAGGCCTAATCCTGTATTCAGTTACAACTTTGTCTACAATAAAGAAGAGGTTTATTACTCATGGAACAGCAGTGGTAGCTCTCTAATATCAAAAGTGGTACTTAACCAAACCAGTAACGAACGTCCTCGCTATACATGGTCAAAATCTGACAAATCATGGATGCTTCATTCAAACATGCCAGGCGACTATTGCGATCGTTATGGTCTGTGTGGAAACAACGGATATTGCAACATTACTAATTCACCAGTATGTGATTGTTTACAAGGGTTCAAGCCTAAGTTTCTTGAAAAATGGAACTCAATGGACTGGTCCCAAGGGTGTGTCAGAAATCCTCCATTGAACTGCACCAGTGATGGATTTATCTCAATGACAGGCTTGAAAGTTCCAGATACTACAAATACTAGCGTGGACAAGAGTATTGGTCTAGAACAATGTAGACACAAATGCTTGAAAAATTGTTCCTGCGTGGCCTATAGAAATATAAATATAAGTGGAGCAGGAAGTGGCTGTGTTATGTGGTTTGGTGAATTAATTGATATCAAACTTTTTCCATTAGGTGATCAAGTTCTATATATCCGAATGCCTGCTTCAGAATTAGGCAAAAATAATACTGAGGTTGAGCACAGGAGGAACCTGAGAAAAAAAGTTGTAATTAGTGTTTCTGCAGCTTTGGGAATGTTTTTAATTGTTATTTACTTTTCCTACAGATTCAGGAGGAGTATTGTTGGGAAGTCGACGACAGAAGGTGACTATGAAAGACATATGGATGATCAGGATCTTCCCTTGCTCAATTTGTCGACAATTATTATTGCCACTGACAACTTCTCAAAGAAGAACAAAATCGGAGAAGGTGGTTTTGGACCTGTTTATATGGGAAAATTAGGCAGTGGGCTAGAAATTGCTGTAAAGAGACTTTCACAGAGCTCAAAACAAGGGATGAGAGAGTTCATTAATGAAGTAAAACTTATTGCAAATGTTCAGCATCGAAATCTTGTAAAGCTTATCGGCTGTTGCATTCAGAAACACGAAAAGTTGTTAGTTTATGAATACATGGCTAATGGTAGCCTAGACTACCTCATCTTTGATCGTACCAAAAGTCAACTGCTAGATTGGCCAAAGCGTTTCAACATAATATGTGGAATTGCTAGAGGGCTTATGTATCTTCATCAAGATTCTCGATTAAGGATTGTCCATAGAGATCTCAAAGCGAGTAATGTTTTACTGGATGATACTATGAACCCAAAAATATCAGATTTTGGAATGGCTAGAACTTTTGGGGGAAACCAAATTGAAGGAAACACAAATAGAATTGTTGGGACATATGGGTACATGGCACCAGAGTACGCTATTGATGGACAATTTTCTTCGAAATCTGATGTTTTCAGCTTTGGTGTTTTAATATTAGAGATTATATGTGGGAAGAAAAACCGAGTGCTTAATCGTGCAAAGCAAACCCTAAACCTTGTTGCTTACGCATGGACATTTTGGAAACACGGAAAAGCTTCTCAACTAATTGACTCGAACATAGAAGATTTATGCATTGTATCAGAAGTATCGCGTTGCATCCACATTGGACTCTTATGTGTGCAACAATACCCAGAAGATAGGCCTACCATGGCTGATGTTATTCTAATGCTAGGGAGTGAAATGGCATTGGATGATCCTAAGGAGCCAAGTTTTATCACAAGGAAGGAATCTACTGAAGCAAATTCGAATTCAAGTGGGAAGGATATAAGTTCAAACTATGAAATGACCATAACTACTTTAAGTGTTCGTTGGAATGAGGAACAAATTGTGGTTTTTAAAAACTTCCTCATTCTTAACCTTAGACTCAGACACACTAGCAAAATCCAATCATCAATAACCAAATACCAGTGTCATGCAATGGAAATTCTTTCTTTCATAACTATGATGATTGCTTACATGATTGTACCAATTATAGCAACTAACTCCATCAGTGTGTCTGAGTCTTTAAGTGATGGTGAAACTTTAGTTTCAAAAGATGGACAATTTGAACTGGGCTTTTTTAGGCCGGGCAATTCTACAAGACGTTATCTTGGGATTTGGTACAAGCAGGTGCCTAAAACAAAAGTTGTTTGGGTAGCAAATAGGGCCAACGGCATCAACAATACCTTAGGCATCTTAACACTGAGTACCACAGGCAATCTCATACTCCAGCAAAACGAAACTTCTGTTTGGAGTACACCATCAGAAAAACAAGCACAGAAGCCAATAGCAGAGCTCTTGGACAATGGCAATCTTGTGATAAGAAACCAAGGAGAAACAGATCCAGAAGGAGGAACCTACTTGTGGCAAAGCTTTGACTATCCGTGTGATACAATTTTGCCAGGGATGAAGTTGGGATGGGATCTCAAAAATGATTTTGAATGGAGAGTAACTTCTTGGAAGAGTCCTGATGATCCGTCACCAGGAGATCTTTCTTGGAGTCTTGTGCTTCATAATTATCCTGAGTTTTATCTGATGAACGGAACAGAGAAATACTCTCGGATTGGACCATGGAATGGACTTCAAATAAGTGGCCTGCATGGTCTAACACAAACTTCTGTATTTGATTTCAAGTATGTTGCTAATAATGATTTGAATTATGTGTCTAATAAGGATGAGATGTTTTACTCCTTTACCCGCAAGAATTCTTCTGTCATAGTCAATGTTGCGTTACAGCTACGTGCTTTTATCATCTCTGTGTGGTCAGATCATAAAAAACTTTGGGTCATATATTCAGAGACCCCACTTGACCAGTGTGACATCTATGGAACTTGTGGAGCCAATTCCATGTGCTCAATTGACAAATCACCTTTTTGCGAATGTTTACTCGGGTTCGTTCCAAAGTCAATGCAACAATGGGCCTTATTAGACAGGAGTCAAGGGTGTGTCCGCAACATATCATTAAGTTGCAACAATCCACAAATGGATAAGGATGTGGATGATGAGTTTATCAAATACAGGGGCGTCGTAGTACCAGACACTACACATACTTTATTGGATGAGAATATTGATTTAGAGTTATGCAGAACTATGTGCTTGAATAATTGCACTTGTACAGCTTACACTAATTCAGATATAAGTGGAAAGGGTAGTGGCTGTGTCATGTGGTTTGGTGATCTAATCGACATAAGACAGTTTGACACTGGTGGCCAAGATCTCTATATTCGTATAGCTCACAAAGTAACAAAGGCTTCAAACGGGCACAACAAAAGCGTGATAACCATAGCTACTACCATTGCTGCTGCAATTTCTGGGATGCTTTTATTTTGCATATATGTGATATATAAAGTCCGAAAGAGAATTGCGGATAAATCAAAGACAGAAGATAACATTGAAAAGCATCTACAGGATATGGATTTACCGTTATTTGATCTGCAAACAATTGTTATCGCCACTAGCAACTTCTCCTTGAATAATAAGATTGGACAAGGTGGTTTTGGATCTGTATACAAGGGAAAATTAGCAGATGGACAAGAAATTGCAGTTAAGAGACTTTCAACAAACTCTGGACAAGGAATTACCGAGTTCCTAACAGAAGTAAAACTGATTGCAAAACTTCAACACCGAAATCTGGTTAAGCTTCTTGGCTGTTGTGTTGGAGGACAAGAAAAATTGCTAGTATATGAATACATGGCTAACGGTAGCCTTGACTCCTTTATCTTTGATAAAATAAAAGGTAAATTGTTGGAGTGGCCCGAACGCTTCCAAATAATATTTGGAATTGCTAGGGGACTTGTGTATCTTCATCAAGACTCTCGATTAAGGATTATTCACAGAGATCTCAAAGCAAGTAATGTATTATTGGATGATAAGTTGAATCCAAAAATATCAGACTTTGGAATGGCTAGATCTTTTGGAGGAGATCAAATTGAAGGAAATACAAATAGAGTAGTTGGAACTTACGGATACATGGCACCAGAGTATGCTGCTGATGGACAATTTTCAATCAAATCAGACGTCTTCAGCTTTGGTGTTTTACTATTGGAGATTATATGTGGGAACAAAAATAGAGCACTTTATCATGAAAATAAGACACTTAACCTTGTTGGTTATGCATGGACACTTTGGAAAGAGAGAAAGTCATTGGAGTTGATTGAGTTAAGAATAAAGGAGTCGTGTGTTGTTTCAGAGGTATTGAGGTGCATCCATGTGAGTCTGTTGTGTGTGCAACAATACCCTGAGGATAGACCTACAATGACATCTATAGTTCAAATGCTAGGTAGTGAAATGGAATTGGAGGAGCCTAGAGAGCCAGGTTTCTTTCCAAGGAAAGTTTCTGATGAAGGAATTCAAAATGAAATGAGTTTGAATGAGGAATTAACCATTACATCGCTTAATGGTCGATGA 5016 0.3852 MSFITYILFILSLTVSSSIAGDFKSSITESLFISDGETIVSPNGLFELAFFSLKNPNKRYLGIQFKNIPTQNVVWVANGGQPINHSSAVLTLNSSGCLVLTHNNNVVWSTNTSTKPLKPVAQLLDTGNLVIKDIVDETYLWQSFDYPSNTLLAGMKLGWDLKRNLNRRLIAWKSDDDPTPGDFTWGVVLNNYPEIYMMKGETKYHRLGPWNGLRFSGMPEMRPNPVFSYNFVYNKEEVYYSWNSSGSSLISKVVLNQTSNERPRYTWSKSDKSWMLHSNMPGDYCDRYGLCGNNGYCNITNSPVCDCLQGFKPKFLEKWNSMDWSQGCVRNPPLNCTSDGFISMTGLKVPDTTNTSVDKSIGLEQCRHKCLKNCSCVAYRNINISGAGSGCVMWFGELIDIKLFPLGDQVLYIRMPASELGKNNTEVEHRRNLRKKVVISVSAALGMFLIVIYFSYRFRRSIVGKSTTEGDYERHMDDQDLPLLNLSTIIIATDNFSKKNKIGEGGFGPVYMGKLGSGLEIAVKRLSQSSKQGMREFINEVKLIANVQHRNLVKLIGCCIQKHEKLLVYEYMANGSLDYLIFDRTKSQLLDWPKRFNIICGIARGLMYLHQDSRLRIVHRDLKASNVLLDDTMNPKISDFGMARTFGGNQIEGNTNRIVGTYGYMAPEYAIDGQFSSKSDVFSFGVLILEIICGKKNRVLNRAKQTLNLVAYAWTFWKHGKASQLIDSNIEDLCIVSEVSRCIHIGLLCVQQYPEDRPTMADVILMLGSEMALDDPKEPSFITRKESTEANSNSSGKDISSNYEMTITTLSVRWNEEQIVVFKNFLILNLRLRHTSKIQSSITKYQCHAMEILSFITMMIAYMIVPIIATNSISVSESLSDGETLVSKDGQFELGFFRPGNSTRRYLGIWYKQVPKTKVVWVANRANGINNTLGILTLSTTGNLILQQNETSVWSTPSEKQAQKPIAELLDNGNLVIRNQGETDPEGGTYLWQSFDYPCDTILPGMKLGWDLKNDFEWRVTSWKSPDDPSPGDLSWSLVLHNYPEFYLMNGTEKYSRIGPWNGLQISGLHGLTQTSVFDFKYVANNDLNYVSNKDEMFYSFTRKNSSVIVNVALQLRAFIISVWSDHKKLWVIYSETPLDQCDIYGTCGANSMCSIDKSPFCECLLGFVPKSMQQWALLDRSQGCVRNISLSCNNPQMDKDVDDEFIKYRGVVVPDTTHTLLDENIDLELCRTMCLNNCTCTAYTNSDISGKGSGCVMWFGDLIDIRQFDTGGQDLYIRIAHKVTKASNGHNKSVITIATTIAAAISGMLLFCIYVIYKVRKRIADKSKTEDNIEKHLQDMDLPLFDLQTIVIATSNFSLNNKIGQGGFGSVYKGKLADGQEIAVKRLSTNSGQGITEFLTEVKLIAKLQHRNLVKLLGCCVGGQEKLLVYEYMANGSLDSFIFDKIKGKLLEWPERFQIIFGIARGLVYLHQDSRLRIIHRDLKASNVLLDDKLNPKISDFGMARSFGGDQIEGNTNRVVGTYGYMAPEYAADGQFSIKSDVFSFGVLLLEIICGNKNRALYHENKTLNLVGYAWTLWKERKSLELIELRIKESCVVSEVLRCIHVSLLCVQQYPEDRPTMTSIVQMLGSEMELEEPREPGFFPRKVSDEGIQNEMSLNEELTITSLNGR 1671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03545 1671 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 144 - -
Vivi5g03545 1671 CDD STKc_IRAK 1364 1629 - -
Vivi5g03545 1671 Gene3D Phosphorylase Kinase; domain 1 460 571 - -
Vivi5g03545 1671 Gene3D Phosphorylase Kinase; domain 1 1318 1433 - -
Vivi5g03545 1671 Pfam PAN-like domain 1202 1266 IPR003609 -
Vivi5g03545 1671 Pfam PAN-like domain 336 401 IPR003609 -
Vivi5g03545 1671 SUPERFAMILY Protein kinase-like (PK-like) 482 774 IPR011009 -
Vivi5g03545 1671 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Vivi5g03545 1671 Pfam Protein tyrosine and serine/threonine kinase 498 764 IPR001245 GO:0004672|GO:0006468
Vivi5g03545 1671 Pfam Protein tyrosine and serine/threonine kinase 1359 1629 IPR001245 GO:0004672|GO:0006468
Vivi5g03545 1671 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 178 IPR036426 -
Vivi5g03545 1671 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 866 995 - -
Vivi5g03545 1671 Gene3D Transferase(Phosphotransferase) domain 1 572 783 - -
Vivi5g03545 1671 Gene3D Transferase(Phosphotransferase) domain 1 1434 1640 - -
Vivi5g03545 1671 ProSiteProfiles PAN/Apple domain profile. 1193 1281 IPR003609 -
Vivi5g03545 1671 CDD PAN_AP_plant 1191 1281 - -
Vivi5g03545 1671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Vivi5g03545 1671 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1434 1637 - -
Vivi5g03545 1671 Pfam D-mannose binding lectin 73 173 IPR001480 -
Vivi5g03545 1671 Pfam D-mannose binding lectin 919 1024 IPR001480 -
Vivi5g03545 1671 Pfam S-locus glycoprotein domain 1057 1172 IPR000858 GO:0048544
Vivi5g03545 1671 Pfam S-locus glycoprotein domain 206 315 IPR000858 GO:0048544
Vivi5g03545 1671 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 572 775 - -
Vivi5g03545 1671 CDD PAN_AP_plant 332 416 - -
Vivi5g03545 1671 Gene3D - 866 995 IPR036426 -
Vivi5g03545 1671 Gene3D - 19 144 IPR036426 -
Vivi5g03545 1671 SMART ntp_6 1201 1280 IPR003609 -
Vivi5g03545 1671 SMART ntp_6 336 415 IPR003609 -
Vivi5g03545 1671 ProSiteProfiles Protein kinase domain profile. 496 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g03545 1671 SUPERFAMILY alpha-D-mannose-specific plant lectins 919 1029 IPR036426 -
Vivi5g03545 1671 FunFam receptor-like serine/threonine-protein kinase SD1-8 1329 1433 - -
Vivi5g03545 1671 ProSitePatterns Protein kinases ATP-binding region signature. 1364 1386 IPR017441 GO:0005524
Vivi5g03545 1671 FunFam Os04g0303100 protein 909 1055 - -
Vivi5g03545 1671 SUPERFAMILY Protein kinase-like (PK-like) 1343 1645 IPR011009 -
Vivi5g03545 1671 FunFam Os04g0303100 protein 63 204 - -
Vivi5g03545 1671 CDD STKc_IRAK 502 767 - -
Vivi5g03545 1671 CDD B_lectin 876 998 IPR001480 -
Vivi5g03545 1671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1479 1491 IPR008271 GO:0004672|GO:0006468
Vivi5g03545 1671 ProSiteProfiles EGF-like domain profile. 281 317 IPR000742 -
Vivi5g03545 1671 SMART blect_4 876 998 IPR001480 -
Vivi5g03545 1671 SMART blect_4 30 147 IPR001480 -
Vivi5g03545 1671 ProSiteProfiles PAN/Apple domain profile. 336 417 IPR003609 -
Vivi5g03545 1671 CDD B_lectin 30 147 IPR001480 -
Vivi5g03545 1671 CDD EGF_CA 283 314 - -
Vivi5g03545 1671 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 758 - -
Vivi5g03545 1671 ProSiteProfiles Bulb-type lectin domain profile. 870 990 IPR001480 -
Vivi5g03545 1671 ProSiteProfiles Protein kinase domain profile. 1358 1643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g03545 1671 SMART serkin_6 1358 1629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g03545 1671 SMART serkin_6 496 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g03545 1671 FunFam receptor-like serine/threonine-protein kinase SD1-8 468 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03545 Vivi-Chr5 127865617 127874021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03545 437 798 Receptor kinase-like Gene Family AT4G23190 50.136 4.16e-111 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi5g03545 PK_Tyr_Ser-Thr 1.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03545 - - gmx:100812007 2062.34