Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03539 ATGGGAATTCTGAACTATATGGTTGTTATTAATTTTAGTTTTTGCGTTCTTTTAGTTTTCTATCTTGTAGCAGCTGGTAGCTTTGTAGTTAAGAAGGAAACACCAGATGGTTTTGTTAGAGAACTATTTGATTCAGCGTCTGGATTGTTCGACGAGCATACGGCAAAGGTATTACGGACCACATGCTGTGAAGATTTAATTCATTTAAAGGAAGAGGTTGGATATCGTGATTTATGTCTTCCACTGGAATTCTATGCTAGTACCAATAAACTTAGTTCCACGATTCAACCTTTGGCACAAACAGAAATCCAAAAATTGCTTGGTGCTTTGCATCCTCACATCAAGGAAAGCTTTCTTCATTGTTTGAGAAAAAATAATCTCCAATTACGTGTCTCAGGAGAAGAGGATGATTACAAGATACAGCATGTCACTAATACGGGATACCTGTTTTCCACATCTAGTATTCTTAGAAAAAATCCGGGCCGCGTTTTGCTCCAGCACATATCAGAACCACCTAGTCCAGGCCCTGCAGCTGGATCACCTGCACCTAGTCTCACTCCACCACCTGAGCCCAGTCCGACTCCATCGCCTGGACCCAGTTTATCTCCATCACCTGCTCCAGTGCCTCTACTTCCTCAACCTCCTCCTCCTCCTTCGTCACCAACCCCATTTTTTCCCAGACTGACACCGCCAGATGCTGCTGATATTTCTGCTCCTCCATCTCCTGTAACGAACGGGGAGGAAGATAAGTCAAGTAAAAAGAGAACAGTTGTTCTTTCTGTAGTAATAACTTTATCAGTGATATTTATAGCTGCAGCATTGTTCTTTTTGTGCTGTCGTAAGAATGCCCGGCTTAGACGAAATGATGAGAGGCCTCTTCTCAGTTTGAGCATGAATGACTATTCTTTTGGTCCTTCCAATCAGGCATTTGGAAATTCGACAAAAGCGGAGAAACATGGGTTTCAGTCATCAAGTAATAATTTAGTAGACAACAAGAAGACCTCGCTGCAAGAAAATCAATCAATAGGAGCTCATACTATTTCCGCATCACCATTTGAATTAAAACCTCCTCCAGGGAGAGTGGGAGCTATCCATTCTGGAATACCACCTTTAAGACCTCCTCCAGGCAGAATGAATCCGCTTCCGCCGGAGCCACCTTCATTTAGACCATCTAGCAATACTGCTGTCGCTGCGGCTGCTGCATCTCCTCCTCAACAGTCTAGTGTTGGCAGTGCTCGACCTCCTACTGCTCCTTCACCCCCACAATCAACACTAGCTGGTGCCACACCTGGTCCTCCTCGTCCTCCACTACCCCCTGGCCCGCCTGGTGCCAGTCCCCGTCCTCCACCATCCCCAGCACCACCTGGTGCTAAACCTGGTCCTCCTCCCCCACCACCACCTGGTGCTAAACCCGGTCCTCCTCCCCCACCACCACCAGCACCACTTGGTGCTAAACCTGGTTCTCGTCCACCTCCTCCTCCTCCTAAGATCGGTGTAGCTCCTCCTCGACCACCGATTGGCCCGAAGGCTAGTGGACCAAAAGCTTCACTGAATGCTGAAGCAGCTGGAGCTGATAGTTCTAAAGCCAAACTAAAACCATTTTTCTGGGACAAGGTTCAAGCTAATTCAGATCAATCAATGGTTTGGAATGAGATCAAATCAGGATCATTCCAGTTTAACGAAGAGATGATAGAGACACTTTTTGGTTATAATGCTGCAAATAAAAACAATGGTCAACGACAAAAGGAGTCTTCCTCCTCCCAAGATCCTTCTCCCCAGTATATCCAGATCGTTGACAAAAAGAGAGCACAAAATTTATTAATTCTGTTGCGAGCATTGAATGTGACAATGGAAGAAGTTTGCGATGCACTCTATGAAGGAAATGAGCTACCATCGGAATTTCTCCAAACCTTGTTGAAGATGGCACCGACATCAGACGAAGAACTTAAGCTTCGACTTTTTAATGGTGATCTGTCTCAACTTGGCCCTGCTGACAGTTTCCTTAAAGCTCTGGTTGACATTCCCTTTGCTTTTAAGCGAATGGAAGCACTGCTTTTTATGGGAACATTTAAAGAGGAACTCACTACTACTAAGGAGTCTTTTGCAGTTTTAGAGGTTGCTTGTAAGGAACTAAGAAACAGCCGTCTTTTCCTCAAACTTCTTGAAGCTGTTCTCAAAACTGGAAACCGTATGAACGACGGAACATACCGTGGCGGTGCACAAGCATTTAAACTTGATACACTTTTGAAATTATCTGATGTAAAAGGAACAGATGGCAAGACTACACTCTTACACTTTGTTGTTCAAGAGATTATCCGCTCCGAGGGTATAAAAGCTGCCCGAGCAGCAAAAGAGAGGCAGGGTTTGTCCAGTATTAAAACAGAAGAAGTTCTTGAGGATAGTGCACGTGAAACAGAAGAAGACCACTACCGCGAACTTGGTCTTGAGATGGTTTCACATTTGAGCAGTGAGCTCGAAAATGTTAGAAGAGGATCTGTTCTAGATGCGGACAGCTTAAGAGCAACCGCTGCCAAACTTGGCCACGGTCTCTTGAAAGCCAAAGACTTACTGAACAAAAACCTGAAGAATGTGGAGGACGATCGAGGGTTTCGTGAGACAGTGGAAAGTTTTGTCCAGGATGCAGAGGCTGATGTTATGAAACTGCTTGAAGATGAGAAGAGAGTTACAGCTCTGGTGAAGAGCACTGGCGATTACTTTCACGGGAATGCTGCAAAGGATGATGGCCTGCGATTGTTTGTAGTAGTGAGAGACTTCTTAATAATGCTTGATAAGGTATGCAAGGAGGTGAGAGATGCACAGAAGAAACCAGCAAAACCTCGAAAACAAGAAACTTCACGAGGATTGTCTCCGCCTGATACACGTCCATCGCCTTCTGATTATCGTCAGCGGCTCTTTCCAGCTATAGCTGAAAGGAGGATAGATGACCTTAGTTCAGATGATGAGAGTCCTTAG 2973 0.4504 MGILNYMVVINFSFCVLLVFYLVAAGSFVVKKETPDGFVRELFDSASGLFDEHTAKVLRTTCCEDLIHLKEEVGYRDLCLPLEFYASTNKLSSTIQPLAQTEIQKLLGALHPHIKESFLHCLRKNNLQLRVSGEEDDYKIQHVTNTGYLFSTSSILRKNPGRVLLQHISEPPSPGPAAGSPAPSLTPPPEPSPTPSPGPSLSPSPAPVPLLPQPPPPPSSPTPFFPRLTPPDAADISAPPSPVTNGEEDKSSKKRTVVLSVVITLSVIFIAAALFFLCCRKNARLRRNDERPLLSLSMNDYSFGPSNQAFGNSTKAEKHGFQSSSNNLVDNKKTSLQENQSIGAHTISASPFELKPPPGRVGAIHSGIPPLRPPPGRMNPLPPEPPSFRPSSNTAVAAAAASPPQQSSVGSARPPTAPSPPQSTLAGATPGPPRPPLPPGPPGASPRPPPSPAPPGAKPGPPPPPPPGAKPGPPPPPPPAPLGAKPGSRPPPPPPKIGVAPPRPPIGPKASGPKASLNAEAAGADSSKAKLKPFFWDKVQANSDQSMVWNEIKSGSFQFNEEMIETLFGYNAANKNNGQRQKESSSSQDPSPQYIQIVDKKRAQNLLILLRALNVTMEEVCDALYEGNELPSEFLQTLLKMAPTSDEELKLRLFNGDLSQLGPADSFLKALVDIPFAFKRMEALLFMGTFKEELTTTKESFAVLEVACKELRNSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIKAARAAKERQGLSSIKTEEVLEDSARETEEDHYRELGLEMVSHLSSELENVRRGSVLDADSLRATAAKLGHGLLKAKDLLNKNLKNVEDDRGFRETVESFVQDAEADVMKLLEDEKRVTALVKSTGDYFHGNAAKDDGLRLFVVVRDFLIMLDKVCKEVRDAQKKPAKPRKQETSRGLSPPDTRPSPSDYRQRLFPAIAERRIDDLSSDDESP 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03539 990 MobiDBLite consensus disorder prediction 390 413 - -
Vivi5g03539 990 MobiDBLite consensus disorder prediction 938 954 - -
Vivi5g03539 990 MobiDBLite consensus disorder prediction 174 237 - -
Vivi5g03539 990 PANTHER FORMIN-RELATED 240 979 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vivi5g03539 990 MobiDBLite consensus disorder prediction 345 527 - -
Vivi5g03539 990 MobiDBLite consensus disorder prediction 368 389 - -
Vivi5g03539 990 MobiDBLite consensus disorder prediction 166 254 - -
Vivi5g03539 990 SUPERFAMILY Formin homology 2 domain (FH2 domain) 592 951 - -
Vivi5g03539 990 MobiDBLite consensus disorder prediction 308 329 - -
Vivi5g03539 990 ProSiteProfiles Formin homology-2 (FH2) domain profile. 521 955 IPR015425 -
Vivi5g03539 990 Gene3D Formin, FH2 domain 527 954 IPR042201 -
Vivi5g03539 990 MobiDBLite consensus disorder prediction 414 509 - -
Vivi5g03539 990 MobiDBLite consensus disorder prediction 938 971 - -
Vivi5g03539 990 SMART it6_source 521 947 IPR015425 -
Vivi5g03539 990 Pfam Formin Homology 2 Domain 526 929 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03539 Vivi-Chr5 127626908 127632194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03539 480 981 FH2 protein (formin) Gene Family AT5G54650 62.698 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03539 - - gmx:100793413 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03539 5 127626908 127632194 Vivi5g03539 5 127626908 127632194 ECH
Vivi2g06755 2 205885930 205891143 Vivi5g03539 5 127626908 127632194 PCT