Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03530 ATGACCCTACACACTAGTGAAACCTTCACACACAATCTAACTCTTTCTCAGACTCTTCCCACTAGAGTTGAGTCTTCTTGCTTCAAAATTCAAATGGTCACCAAATTTCAAAACCGGCTTCCATTATCACTCTCACCCACATCTCCAATCCCTTCCAAGTTTCGGGATTTTGTGGGAGATAAGCATTGCCTAGAAACAATGGTGGAGACTCCGGTTAATGGGAGAATAAGGCAAGCTTTTACAGTTGTAAACGGAGGCCACGATGTTGGCTTGACTAGTACTCCTCCTAGCATTGCTGGATCGGATTATGGTGTGATAGAGTTCACAAGAGAGGATGTTGAGGCGTTGCTAAATGAAAAAGCCAAAAAGAAAGAGAGGTTTAATTATAAGGAAAGATGCGAAAATATGGTGGATTATATAAAAAGGCTTAAGGTTTGTATCAAATGGTTCCAAGACATTGAGATGAGCTACTCAATAGAGCAGGAAAAGTTAAAGAATTCACTGGAAATGACTCAGCAAAAGAGTGTAGAAATCGAGTTGCTGCTTAAAATCAAGGAAGAGGAAATGAACTTAATCATTGCAGAAATGAGAAAGAATTGTACTTCTTTACAAGAGAAATTGATAAAGGAAGAAGTAGAGAAGTCGGCTGCTGTGGATTCCCTTGTTAAAGAGAGAGAAGCAAGGCTTGATATTGAGAGGTCACATACCACTCTTTCTGAGGATATTGGAAGAGCTCAACGAGAGATTCAAAGTGCGAATCAGAAGATATCATCACTCAATGAGATGTATAAGCGGTTACAAGAATACATAACGAGTTTACAGCAGTACAATGGAAAACTTCATACGGAGCTTTCATCAGTTGAAGATGAACTTAAACGCGTAGAGAAAGAGAAGGCTGCTGCAGTGGAGAACATCGCTATGTTAAGTGCTCAACTTACTTTATCCATTTCTTCTCAAGAAGAAGCCACAAAACAGAAGGACGATCTTTCTAGTGAAGTTGCTTCACTTAGAGGAGAGTTGCATCAAATAAGAGATGATAGAGACCGTCGATTATCTCAAGCAGAAACCTTAAATGCTGATTTGATGAGATTAAAAGAATCTAGGGAAAACTCCTGCGTTGAATTGGACAGCTTGACATTAAAAGCGAATGAACTGGAGGAAAAAAGTTCTTTGAAAGAGAATCAAATAAAGGCATTGCAAGAACAGTTAGCAACTGCAGAGGAGAAACTGCAGGTGTCTGATATATCTGTATTCGAGACTAGGACGGAATTTATAGGGCAACAAAAATTTGTTGATGAGTTGCAAAGACGCTTGGAAGATGCAGAATATAAACTTATAGAAGGGGAGAGGCTACGGAAGAAACTACACAATACCATTTTGGAGTTAAAAGGGAACATCCGTGTATTCTGTCGGGTGAGGCCTTTGTTACACGATGAAAGCCGTAGCACGGAAGGGAAGATATTCAGTTATCCAACATCAATGGATGCTTCTGGTCGACAAATTGACCTAGCCCAAAATGGCCAGAAACATTCTTTCACATTTGATAAAGTTTTTATACCAGAGGTATCACAAGAAGAAGTTTTTGTAGAAATTTCACAGCTTGTACAAAGTGCTCTTGATGGTTATAAGGTTTGCATCTTTGCCTATGGTCAAACCGGATCAGGGAAAACCTATACAATGATGGGAAGACCTGGACATCCGGAGGAAAAGGGATTGATACCTCGTTCGTTAGAACAAATATTTCAAACGAAACAGTCTCAGCAACCTCAAGGCTGGAAATATGAAATGCAGGTATCAATGTTAGAAATATACAACGAAACCATTCGTGATCTGATGTCGACAAACAGATTGTCGTCGGAAAATGGCACTCCTGGAAAGCAATATACAATCAAACATGATGCAAGTGGAAATACACAAGTTTCTGATCTTACAGTAGTGGATGTTCACAGTGCAAAAGAAGTCGCGTTTCTTTTAAATCAAGCTGCAAATAGCAGATCTGTGGGAAAAACTCAGATGAATGAACAGTCATCAAGAAGCCATTTCGTGTTCACTCTTCGAATATATGGTGTAAATGAGAGTACTGATCAACAAGTACAAGGTGTTCTGAATCTAATTGACCTTGCTGGTAGCGAGCGTCTCTCGAAGAGTGGTTCAACTGGTGATCGGTTGAAAGAAACTCAAGCAATCAATAGAAGCTTGTCATCATTGAGCGATGTCATATTTGCCTTGGCCAAGAAGGAAGATCATGTGCCATTCAGAAACTCAAAGCTTACATATCTACTTCAACCTTGTCTCGGTGGAGACTCAAAGACATTAATGTTCGTAAACATATCACCCGATCCTTCTTCGGTTAGCGAGTCACTATGCTCACTCAGGTTTGCTTCAAGAGTCAATGCTTGCGAGATTGGAACACCTCGTCGTCAGACCAATGGCCGTGCGACAGACTCTCGTTTGAGCTATTTCTAA 2466 0.4015 MTLHTSETFTHNLTLSQTLPTRVESSCFKIQMVTKFQNRLPLSLSPTSPIPSKFRDFVGDKHCLETMVETPVNGRIRQAFTVVNGGHDVGLTSTPPSIAGSDYGVIEFTREDVEALLNEKAKKKERFNYKERCENMVDYIKRLKVCIKWFQDIEMSYSIEQEKLKNSLEMTQQKSVEIELLLKIKEEEMNLIIAEMRKNCTSLQEKLIKEEVEKSAAVDSLVKEREARLDIERSHTTLSEDIGRAQREIQSANQKISSLNEMYKRLQEYITSLQQYNGKLHTELSSVEDELKRVEKEKAAAVENIAMLSAQLTLSISSQEEATKQKDDLSSEVASLRGELHQIRDDRDRRLSQAETLNADLMRLKESRENSCVELDSLTLKANELEEKSSLKENQIKALQEQLATAEEKLQVSDISVFETRTEFIGQQKFVDELQRRLEDAEYKLIEGERLRKKLHNTILELKGNIRVFCRVRPLLHDESRSTEGKIFSYPTSMDASGRQIDLAQNGQKHSFTFDKVFIPEVSQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQTKQSQQPQGWKYEMQVSMLEIYNETIRDLMSTNRLSSENGTPGKQYTIKHDASGNTQVSDLTVVDVHSAKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINRSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSVSESLCSLRFASRVNACEIGTPRRQTNGRATDSRLSYF 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03530 821 PANTHER KINESIN-LIKE PROTEIN KLP-3 112 807 IPR027640 GO:0003777|GO:0007018
Vivi5g03530 821 Pfam Kinesin motor domain 471 798 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g03530 821 Coils Coil 368 416 - -
Vivi5g03530 821 Coils Coil 277 311 - -
Vivi5g03530 821 FunFam Kinesin-like protein 411 802 - -
Vivi5g03530 821 ProSitePatterns Kinesin motor domain signature. 700 711 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vivi5g03530 821 SMART kinesin_4 463 808 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g03530 821 Coils Coil 431 451 - -
Vivi5g03530 821 CDD KISc_C_terminal 463 802 - -
Vivi5g03530 821 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 424 798 IPR027417 -
Vivi5g03530 821 PRINTS Kinesin heavy chain signature 670 687 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g03530 821 PRINTS Kinesin heavy chain signature 701 719 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g03530 821 PRINTS Kinesin heavy chain signature 750 771 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g03530 821 PRINTS Kinesin heavy chain signature 541 562 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g03530 821 Gene3D Kinesin motor domain 411 802 IPR036961 -
Vivi5g03530 821 Coils Coil 235 269 - -
Vivi5g03530 821 Coils Coil 319 346 - -
Vivi5g03530 821 ProSiteProfiles Kinesin motor domain profile. 465 800 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi5g03530 821 Coils Coil 106 126 - -
Vivi5g03530 821 Coils Coil 193 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03530 Vivi-Chr5 127500210 127504978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03530 148 797 Calmodulin-binding Proteins AT5G65930 33.435 3.28e-79 276