Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03519 ATGGCTAGCAGTAGCAGAAACTCTTCAACTTTAGCTCTCAGAAATTACTATTATGATGTGTTTGTGAGCTTCAGAGGTGAAGACACTCGCTACAATTTCACCGATTTTCTTTTCCACGCTCTCCAAACACAAGGCATTTTTGCATTTAGGGATGACAATAATCTTCCAAAAGGTGAATCCATTAGACCCGAGCTCCTTCATGCAATCCAACACTCTCAGGTTTATGTTGTCGTCTTCTCAACAAACTATGCTTCCTCAACTTGGTGCTTGCAAGAACTGGAAAAGATATGTGAATGCGTTCAAATGTCTGGAAAACATGTTCTTCCTGTTTTCTATGATGTTGATCCTTCTGACGTCAGACATCAAAGAGGGATTTATGCTGAAGCCTTTTCCAAACATGAACACAGATTCCAACATGACTCCCAGATGGTGTCAAGATGGAGGGAAGCTCTAACACAGGTTGCAAATCTCTCTGGATGGGATCTTCGTCATAAGCCACAGTCTGCAGCGATTAAAGAGATTGTTCAAAAGATAATTAATATATTGGATTGCAAATCTTCATGTGTTTCAAATGATTTAGTTGGTATGGATTCTCCTATCCAAGAATTAGAAAACCTTTTACTTTTGGACTCCGTTGATGATGTTCGTGTGGTAGGAATTTGCGGAATGGGAGGAATAGGGAAGACAACTCTTGCTACTGTTTTATTTGATCAAATCTCTCAACAATTCGGTGCTTGTTGTTTTATTGATGATGTAACCAAAATTTATAGACTACATGATGGTCCACTTGGTGTACAAAAGCAAATTTTAGATCAAACTCTCGGACAAGAGCACCATCAGATATGTAATCATTACAACGCGACTAATCTCATACGGCGCAGGTTATGTCGCCAAAGGGCATTTATAATTCTTGATAATGTTGGTCAAGTCGAACAACTAGAAAAAATAGCTGTGCGTCGTGAATGGTTAGGTGCCGGTAGTAGAATCATTATCATTTCTAGAGATGAGCATATATTGAAACACTATGGGGTGGATGCAATTTACCAAGTTCCTCTCTTGGATTGGCCTAACTCTCTTCAGTTGTTGTGTCAAAAAGCTTTCAAACTTGATCACATTTTGAGTAGTTATGAAGGGTTGGTTAATGACCTACTAAGTTATGCCGATGGCTTACCACTTGCAATTAATGTATTGGGTTCATTTTTATTTGGTCGAGATGTATCTGAATGGAGAAGTGCATTGGATAGATTGAGAGAAAATCCAGACAAAGATGTCATGGATGTGTTGCAATTAAGTTTTGATGGGCTAAGGGAGACAGAAAAAGAAATATTTCTTCATATTGCTTGTTTTTTCAACATGCATATGGAGAAATATGTTAAAAATGTTGTAAATTGTTTTGAATTTCATGCTGATATTGGATTAAGGGTTCTCATTGATAAATCACTTGTAAGCACTGAAAATGAAATGATTGTAATGCACAATTTGTTAGAAGAGCTAGGAAGAAATATTATTGCAAAAAACACAAGCAAAGAACCCAGAGAGTGGACAAGGCTTTGGTTGGACAAACAACTCTACGATGTTATGTTGGAAAATATGGAAAAGAATGTTGAAGCCATAGTTTTGGATCATGAATATAAAGACTGTGAAGACTATGAAGATATGGATGCAGCGATATTCAAAGACTTTTCAAATCTTAGATTGCTCATCTTCAAGTATGTGAAAGTATCGGGAAGCCTCAATCATCTTTCTAACAAATTGAGATATATTGAGTGGAGTGAATATCCTTTCATGTATTTGCCATCAAGTTTTCAGCCCAATCAACTTGTTGAGTTGAAATTGAAGGATAGCAGCATCAAACAACTCTGGGAAGGCAAGAAGAATCTGCCCAAATTGAGAATTTTGGATCTGAGCCACTCCAAAAATCTAATAAAGATGCCAAATTTTGCAGAGTTCCCGAATCTTGAGCGGCTAAATCTGAAAGGATGTATTAAACTTGTGCAGTTGGATCCATCTATTGGGCTTCTAATAAAGCTTGTTTCCTTGAATTTAAAAGATTGCCAAAATCTTGTAAGTCTACCAAGCAACATAACTGGTCTCAGCTCTCTTAAAGATTTAAATATGTCTGGATGTTATGGGTGTTTTAAAGAGTTTAACAAAACATGGCATTTGAATATATGTGAAAGTGCATCACATTCCCAATCAATGTCCTCCATCTACAAATGGGCCACAAAGCCTTACCATTCCTTGTTACCAACTCCCATGACAAAAACAGTAATGTTTCCTTCCTTCCTTAGCTTATATTGTTTGCTTGAAGTTGATATTAGCTATTGTGATTTAAGCCAACTCCCTAAGGCTATTGGATGTTTACGCTGGTTAGAAATGTTAAATCTTCGGGGGAACAATTTTGTGACACTGCCTAGCCTTAGAGAGCTTTCCAAACTTGTATGTTTGAACTTGGAATCTTGCAAGCGGTTAGAATCTTTGCCTGAGCTTCCTTTCCCTACTTCTATCAAGCAGGATCTTCGTAAGAGCAAATATCGTGCGAGAACAGGATTGTTCATTTTCAACTGTCCTAAAATAAGTGATAAGGAACGATGCAGTAGACTGACATTTTCATGGATGACACAATTCATTCAAGTGAACAAAGAATACCCTGCCTTCTTCTACATTGGTATTGTCATTCCAGGAAGTAACATACCAAGTTGGGTTAGCAATCAGAGCATTGGTAATTCAATACCTGTATCTCCCGTTATGCAGGACAACTGCAATAATATCGTTGGCATTTTATGCTGTGTAGTATTTTCTTTAGCACCTCATTATCCAACAATGACAAGTAGTTCTCAATGGAGACCTCTTATAGTACTGTGTGCACCACTAAGCCACGATGTATGGCTTCCGGTAATTGTCGATGGAGATCTTATTACTGTCAAATCAAATCACATCTGGCTAGTCTATATACCTAGGGAGTGTTCTTATGATGTTCCATTACTGTATAATCTTTTCCAAGTTCTAACTATTAGCAATGAAGGCGTAGATGTGGAGGTGAAGAAATGCGGGTATCGTTGGGTATATGAACAGGATCTACAAGAGTTCAACTTAACAACGATGCATCCCGGAAATATGTTAGCTCTGAAACGCAAGTTTTTGGCAATTGAAGATGAGGCACAACCACAACTACACTCATTCAGATGA 3189 0.3772 MASSSRNSSTLALRNYYYDVFVSFRGEDTRYNFTDFLFHALQTQGIFAFRDDNNLPKGESIRPELLHAIQHSQVYVVVFSTNYASSTWCLQELEKICECVQMSGKHVLPVFYDVDPSDVRHQRGIYAEAFSKHEHRFQHDSQMVSRWREALTQVANLSGWDLRHKPQSAAIKEIVQKIINILDCKSSCVSNDLVGMDSPIQELENLLLLDSVDDVRVVGICGMGGIGKTTLATVLFDQISQQFGACCFIDDVTKIYRLHDGPLGVQKQILDQTLGQEHHQICNHYNATNLIRRRLCRQRAFIILDNVGQVEQLEKIAVRREWLGAGSRIIIISRDEHILKHYGVDAIYQVPLLDWPNSLQLLCQKAFKLDHILSSYEGLVNDLLSYADGLPLAINVLGSFLFGRDVSEWRSALDRLRENPDKDVMDVLQLSFDGLRETEKEIFLHIACFFNMHMEKYVKNVVNCFEFHADIGLRVLIDKSLVSTENEMIVMHNLLEELGRNIIAKNTSKEPREWTRLWLDKQLYDVMLENMEKNVEAIVLDHEYKDCEDYEDMDAAIFKDFSNLRLLIFKYVKVSGSLNHLSNKLRYIEWSEYPFMYLPSSFQPNQLVELKLKDSSIKQLWEGKKNLPKLRILDLSHSKNLIKMPNFAEFPNLERLNLKGCIKLVQLDPSIGLLIKLVSLNLKDCQNLVSLPSNITGLSSLKDLNMSGCYGCFKEFNKTWHLNICESASHSQSMSSIYKWATKPYHSLLPTPMTKTVMFPSFLSLYCLLEVDISYCDLSQLPKAIGCLRWLEMLNLRGNNFVTLPSLRELSKLVCLNLESCKRLESLPELPFPTSIKQDLRKSKYRARTGLFIFNCPKISDKERCSRLTFSWMTQFIQVNKEYPAFFYIGIVIPGSNIPSWVSNQSIGNSIPVSPVMQDNCNNIVGILCCVVFSLAPHYPTMTSSSQWRPLIVLCAPLSHDVWLPVIVDGDLITVKSNHIWLVYIPRECSYDVPLLYNLFQVLTISNEGVDVEVKKCGYRWVYEQDLQEFNLTTMHPGNMLALKRKFLAIEDEAQPQLHSFR 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03519 1062 Gene3D - 12 185 IPR035897 -
Vivi5g03519 1062 Gene3D Ribonuclease Inhibitor 549 731 IPR032675 -
Vivi5g03519 1062 Pfam NB-ARC domain 210 422 IPR002182 GO:0043531
Vivi5g03519 1062 PRINTS Disease resistance protein signature 294 308 - -
Vivi5g03519 1062 PRINTS Disease resistance protein signature 625 641 - -
Vivi5g03519 1062 PRINTS Disease resistance protein signature 217 232 - -
Vivi5g03519 1062 PRINTS Disease resistance protein signature 387 401 - -
Vivi5g03519 1062 Gene3D Ribonuclease Inhibitor 754 863 IPR032675 -
Vivi5g03519 1062 Pfam TIR domain 18 184 IPR000157 GO:0007165
Vivi5g03519 1062 Pfam C-JID domain 893 1027 IPR045344 -
Vivi5g03519 1062 Coils Coil 1062 1062 - -
Vivi5g03519 1062 Gene3D - 353 436 IPR042197 -
Vivi5g03519 1062 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 184 - -
Vivi5g03519 1062 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 160 IPR035897 -
Vivi5g03519 1062 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Vivi5g03519 1062 ProSiteProfiles Leucine-rich repeat profile. 790 811 IPR001611 GO:0005515
Vivi5g03519 1062 SMART till_3 17 157 IPR000157 GO:0007165
Vivi5g03519 1062 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 446 IPR027417 -
Vivi5g03519 1062 SUPERFAMILY L domain-like 498 861 - -
Vivi5g03519 1062 Gene3D - 186 347 IPR027417 -
Vivi5g03519 1062 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 714 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03519 Vivi-Chr5 127427457 127433803 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03519 18 806 WRKY Transcription Factor Family AT4G12020 29.678 1.37e-80 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03519 - - vvo:131605388 1657.5