Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03514 ATGGCTAGCAGTAGCAGAAACTCTTCAACTTTAGCTCTAAGAAATAACTATGATGTGTTTGTGAGCTTCAGAGGTGAAGACACTCGCTACAATTTTACCGATTTTCTTTTTGACGCCCTCCAAACAAAAGGAATTTTCGCATTTAGAGATGACAATAATCTTCCAAAAGGTGAATCCATTAGACCCGAGCTCCTCCATGCAATCCAACACTCTCACATTTATGTTGTCGTCTTCTCAAGGAACTATGCCTCCTCAACTTGGTGCTTGCAAGAATTGGAAAGTATATGTGAATGCGTTCAAGTGTCTGGAAAACATATTCTTCCTGTTTTCTATGATGTTGATCCTTCAGACGTCAGACATCAAAGAGGGATTTATGCTGAAGCCTTTTCCAAACATGAACACAGATCCCAACATGACTCCCAGATGGTATCAAGATGGCGAGAAGCTCTAACACAGGTTGCAAATCTCTCTGGATGGGATCTACGTCATAAGCCACAATCTGTAGAGACTAAAAAGATTGTTCAAAAGATAATTAATATATTGGATTGCAAATCTTCATCTGTTTCAAAAGATTTAGTTGGAGTGGATTCTCCTATCCAAGAATTAGAAAAGCTTTTACTTTTGGACTCAGTTGATGAAGTTCATGTGATAGGAATTTGTGGGATGGGAGGAATAGGGAAGTCAAGTCTTGCTACTGTTTTATATGATAGAATCTCTCAACAATTTGGTGCATGTTGTTTTATTGATGATGTGAGTAAAATTTATAGATTACATGATGGTCCACTTGGTGCACAAAAGCAAATTCTAGACCAAACTCTCGGAGAAGAGCACCGTCAGATATGCAATCATTACGCTGCAACTAATCTGATACGACATAGGCTATGTCGGCAAAGGGCCCTTATCATTCTTGATAATGTTGGTCAAGTTGAACAACTAGAAAAAATTGGTGTGCGTCGTGAATGGTTAGGTGCCGGTAGTAGAATCATTATCATTTCTAGAGATGAACATATATTGAAACACTATGGGGTGGATGCAGTTTATCAAGTTCCTCTCTTGAATTGGACTAACTCTCTTCAATTATTGTGTCGAAAAGCTTTCAAACTTGATCACATTTTGAGTAGTTATGAAAGGTTGGTTTATGACATACTAAATTATGTTGATGGCTTACCACTAGCAATTAATGTATTGGGTTCATTTTTGTTTGGCCGAGATATATCCGATTGGAAAAGTGCATTGGCTAGTTTAAGAGAAAATCCAGACAAAGATGTCACGGATGTGCTCCGGTTAAGTTTTGATGGGCTAAGGAAGACAGAAAAAGAAATATTTCTTCATATTGCTTGTTTTTTCAACAAGTATATGGAAAAATATGTTAAAAATGTTTTAAATTGTTGTGAATTTCATGCTGATATTGGATTAAGGATTCTCATTGATAAATCACTTGTAAGCATTGAAGATGAAACAATTGTAATGCATAATTTGTTGGAAGAGCTAGGCAGAAATATTGTTGCAGAATACACAAGTAAAGAGCGCAGAAGGTGGAGAAGGCTGTGGTTCGGCAAACAAATCTACGATGTTATGTTGGAAAATATGGAAAAGAATGTTGAAGCCATAGTTTTGAATCATGAACACATTAATGAAGATATGGATGCAGTGATATTTGAAGACTTTTCAAATCTTAGATTGCTCATCATCAATAATGAGAAAGTATCGGGAAGCCTCAATTGTCTTTCTATCGAATTGAGATATATTGAGTGGAATGAATATCCTTTCATGTATCTGCCATCAAGTTTTCAACCCAATCAACTTGTTGAGTTGATATTGAAGGATAGCAGCATCAGACAACTCTGGGAAGGCAAAAAGAATCTGCCCAAATTGAAAATTTTGGATCTGAGCCACTCCAAAAATCTAATAAAGTTGCCAAATTTTGGAGAGTTCCCGAATCTTGAGCGGCTAAATCTGGAAGGATGTATAAAACTTGTGCAGTTGGATCCATCTATTGAGCTTCTAAAAAAGATTGTTTCCTTGAATTTAAATGGTTGCAAAAGTCTAGGAAGTATACCCAACAACATATTTGGTCTCAACTCCCTTAAAGATTTAAATATGTCTGGGTATTGTTTCAGAGACTTTAACAATACAAGGCTTTTGGTTATGAGTGAAATTGCTCCACGCTCTCAATCAACATCCTCCATCTGTAAATGGACCACAAAGCTTTACCATTCATTATTTTCCACTCCCACAACAAACACAGTTATGTTTCCTTCCTTTCATAGCCTATTTTTTTTACATGAAGTTGATATTAGCTATTGTGGTTTAAGCCAACTCCCTAAGGCTATTGAATGTTTATGTTGGTTGGAAATGTTGAGTCTTGGGGGGAACAATTTTGTGACACTGCCTAGCCTTAGGAAGCTTTCCAAACTTGTATATTTGAACTTGGAGAATTGCAAGTGGTTGGAATCTTTGCCCGAGCTACCTTTCTCTACAATCGAGCAGGATTTTCAAAAGAACAAATATTGGAGAAGAGGATTGTTCATTTTCAACTGTCCTAAAATAAATGATAAGGAACAATGCGGTAGAATGACATTTTCATGGATGACACAATTCATTCAAGTGAACAATGAATACCCTGCTTTCTTTTACGTTAGTATTGTTATTCCAGGAAATGAAATACCAAGTTGGTTCAACAATCAGAGTGTTGGTCATTCAATACCCGTATCTCCTGTTATGCAGGACAAGGACAATAATGTTGTTGGCCTTTTATGTTGTGCACTATTTTATTCCGCACCTCATTATCCAACAATAATAGGATCTTCTGCTAAGTTGAAACTGTCTGCATTAAACAACACTGTCCATCTTCCGGTAATTATCAATGGAGACCTTATTAGTGTCAAATCAAATCACATCTGGCTAATCTATTTCCCTTGGAAGTCATCTTATAATGATTTGTATGCTCCTTTCCATGTTGAAACTTATATCCATCCATGCTTCGATGTGCAAGTGAAGAGATGCGGGTATCGTTGGGTATATAAACAAGATCTACAAGGGTTCAACTCAACAATGACACATCCCGAATATATGTTAGCTCTAAAGCGCAAGTTTTTGGCAATTGAAGATGAGGCACAACCACAACTACACTCATTCAGATGGAGACAGACAACACATGTACAAGAAGGTCAGGAAGAGTCTCAACAGAGAAGAAACATTGACTTGATTTTCTTTTCTGTTGTCACTCAAAGAAATGTAAGTCAGATGGCTATGTCGAGCAGCAGCAACTCCTCCTCTTCAGCTCTGGTAACACTGCCATTGAGGAAGAATTTCGATGTGTTTGTGAGTTTCAGGGGTCCAGATACTCGCTTCAATTTTACAGATCATCTTTTTGCTGCTTTTCAAAGTAAAGAAATCATTGCATTCAGGGATGACAATGATCTTGAAGAGGGAGAATCCATTGGACCCGAACTCCTTCGTGCAATCGAAAACTCTCTGATTTTCGTTGTGGTCTTCTCTATAAACTATGCTTCTTCAACTTGGTGCTTGCGAGAGTTAGAAAAGATCCTTCAATTAAGTCAATTATTTGGAAAACAAATTTTGCCTATTTTCTATGATGTTGATCCTTCTGATGTCAGACATCAAAAAGGAAGCTATGCTGAAGCCTTCTCCAAACATGAACAAAGATTTCAACAAGACTCTCAGATGGTGCAAAGATGGAGGGAAACTTTAACACACGTTGCCAATCTCTCCGGTTGGGATGTTCGTCAAAAGCCACAGTCTGCAGAGATTAAAAAGATTGTTCGAAAGATAATTAAAATATTGGATTGCAAATCTTCATGTGTTTCAAAAGATTTAGTTGGTATGGATTCTCCTATCCAAAAATTAGAAAAGCTTCTACTTTTGGACTCCGTTGATGATGTTCGTGTGATAGGAATTTGTGGGATGGGAGGAATAGGGAAGACAACTCTTGCTACTGTTTTATATGACCGAATCTCTCAATATTTCAGTGCATGTTGCTTTATTGATGATGTAAGCAAAATTTGTAGACTACATGATGGTCCACTCGGTGTACAAAAGAAAATTCTAGATCAAATTCTCGGCCAAGAGAACCATCAGATATGCAATCAATCAAACGCGGCTAATCTCAGACGACGCAGACTATGTCGTCAAAGGGTCCTTATGATTCTTGATAATGTTGGTCAAGTCGACCAACTAGAAAAAATAGCCGTGCATCGTGAATGGTTAGGTGCCGGTAGTAGAATTATTATCATTTCTAGAGATGAGCATATATTGAAACAGTATGGGGTGGATGCAGTTTACCAAGTTCTTCTCTTGGATAGGACTAACTCTCTTCAATTATTGTGTCGAAAAGCTTTCAAACTTGATCACATTTTGAATAGTTATGAAGGGTTGGTTAATGGCATACTACATTATGCCAATGGCCTACCACTAGCAATTAAAGTTTTGGGTTCATTTTTATTTGGTCGAGATGTATCTGAATGGAGAAGTGCATTGGCTAGATTGAGAGAAAGTCCAGAAAAAGATGTGATGGATGTTTTGCGATTAAGTTTTGATGACCTAAGGGAGACAGAAAAAGAAATATTTCTTCATATTGCTTGTTTTTTTAACAAGCTTAGGGAGAAATATGTTAAAAATGTTTTAAATTGTTGTGAATTTCATGCTGATATTGGATTAAGGGTTCTCATTGATAAATCACTTGTAAGCATTGAAGATGAAACGATTGTAATGCATAATTTGTTGGAAGAGTTAGGCATAAGTATTGTTGCAGAAAACACAAGCAAAGAGCCCAGAAAGTGGAGAAAGTTGTGGTTCGACAAACAATTCTATGATGTTATGTTGGAAAATATGGAAAAGAATGTTGAAGCCCTAGTTTTGGGTCATTATCATGAAGACGTTGATAAGGATATGGATGGAGTGATTATCGAAGACTTTTCAAATCTTAGATTGCTCATCATCAACAAGTATGTGAATTTATCGAGAAGCCTCAATCGTCTTTCTAATGAATTGAGATATATTGAGTGGAGTCATTATCCTTTCATGTATTTGCCATCAAGTTTCCAGCCCAATCAACTTGTTGAATTGATTTTGATGCGTAGCAGCATCAAACAACTATGGGAAGGCAAGAAGAATTTGCCCAAATTGAGAATATTGGATCTGAGCCAGTCCGAAAATCTAACAAAGATGCCAGATTTTGGAGAGTTCCCGAATCTTGAGTGGCTAAATCTGGAAGGATGTATAAAACTTGTGCAGTTGGATCCATCTATTGAGCTTCTAAGAAAGATTGTTTTCTTGAATTTAAATTATTGTGAAAGTCTAGTAAGCATACCCAACAACATATTTGGTCTCAGCTCTCTTGAAGATCTAAAAATGTCTGGGTGCTCTCGGTGTTGTTTCAAAGAGTTTAACAATACAAGGGATTTGGATATAAGTGAAACTGCTTCACATTCCCAACCAGCATCCTCCATCTGCAAATGGACCACAAAGCCTTACTATTCCTTGTTTCCCACTCCCACAATAAACACAGTTATGTCTCGTTCTTTGCGTAGCATATATTGTTTACGTGAAGTTGATATTAGCTACTGTGGTTTAAGCCAACTGCCTGAGGCTATTGGATGTTTACGTTGGTTAGAAATGTTAAATCTTGGGGGGAATAATTTTGTGACACTGCCTAGCCTTAGTGAGCTTTCCAAACTTGTATATTTGAACTTGGAGAATTGCAAGCGGTTGGAATCTTTGCCCGAGCTACCTTTCCCTACTTCTGTCGAGCAGGATCTTCGAAAGAACAAATATTTGAAGGGAACAGGATTGTTCATTTTCAACTGTCCTAAAATAAGGGATAAGGAACGATGCAGTAGAATGACATTTTCATGGATGACTCAATTCATTCAAGTGAACAAAGAATACCCTGCCTTCTTTAACATTGGTATTGTCATTCCAGGAAGTGAAATACCGAGGTTGTTTAAAAATCAGAGCGTTGGTAGTTCAATACACGTATCTCCTGTTATGCAGGACAAAGGCAATAATATCGTTGGCTTTTTATGTTGTGTAGTATTTTCTTTCGCACCTCATTATCCAACAATGACAAGATCTTGGTCCCATTTGACACTGTATGCATTAGACAACATTCTCTGTCTTCCGCTATTTGTCAATGGAGATCTTATTACTGTCAAATCAAATCACATCTGGCTAATCTATTTCTCTTGGAAGTCATCTTATGATGATCTGTATGCTCCTTTTCATGTCGAAACTGATATCTCTGGAGGCTTGGATGTGGAGGTGAAGAAATGTGGGTATCGTTGGGTATATAAACAAGATCTACAAGAGTTCAACTCATCAAGGATGCATCCCAAAAAGATGTTAGCTCTAAAGCGCAAGTTTTTGGCAATCGAAGATGATGCACAACCACAACCACATCTGCACTCATCCAGATGA 6438 0.3734 MASSSRNSSTLALRNNYDVFVSFRGEDTRYNFTDFLFDALQTKGIFAFRDDNNLPKGESIRPELLHAIQHSHIYVVVFSRNYASSTWCLQELESICECVQVSGKHILPVFYDVDPSDVRHQRGIYAEAFSKHEHRSQHDSQMVSRWREALTQVANLSGWDLRHKPQSVETKKIVQKIINILDCKSSSVSKDLVGVDSPIQELEKLLLLDSVDEVHVIGICGMGGIGKSSLATVLYDRISQQFGACCFIDDVSKIYRLHDGPLGAQKQILDQTLGEEHRQICNHYAATNLIRHRLCRQRALIILDNVGQVEQLEKIGVRREWLGAGSRIIIISRDEHILKHYGVDAVYQVPLLNWTNSLQLLCRKAFKLDHILSSYERLVYDILNYVDGLPLAINVLGSFLFGRDISDWKSALASLRENPDKDVTDVLRLSFDGLRKTEKEIFLHIACFFNKYMEKYVKNVLNCCEFHADIGLRILIDKSLVSIEDETIVMHNLLEELGRNIVAEYTSKERRRWRRLWFGKQIYDVMLENMEKNVEAIVLNHEHINEDMDAVIFEDFSNLRLLIINNEKVSGSLNCLSIELRYIEWNEYPFMYLPSSFQPNQLVELILKDSSIRQLWEGKKNLPKLKILDLSHSKNLIKLPNFGEFPNLERLNLEGCIKLVQLDPSIELLKKIVSLNLNGCKSLGSIPNNIFGLNSLKDLNMSGYCFRDFNNTRLLVMSEIAPRSQSTSSICKWTTKLYHSLFSTPTTNTVMFPSFHSLFFLHEVDISYCGLSQLPKAIECLCWLEMLSLGGNNFVTLPSLRKLSKLVYLNLENCKWLESLPELPFSTIEQDFQKNKYWRRGLFIFNCPKINDKEQCGRMTFSWMTQFIQVNNEYPAFFYVSIVIPGNEIPSWFNNQSVGHSIPVSPVMQDKDNNVVGLLCCALFYSAPHYPTIIGSSAKLKLSALNNTVHLPVIINGDLISVKSNHIWLIYFPWKSSYNDLYAPFHVETYIHPCFDVQVKRCGYRWVYKQDLQGFNSTMTHPEYMLALKRKFLAIEDEAQPQLHSFRWRQTTHVQEGQEESQQRRNIDLIFFSVVTQRNVSQMAMSSSSNSSSSALVTLPLRKNFDVFVSFRGPDTRFNFTDHLFAAFQSKEIIAFRDDNDLEEGESIGPELLRAIENSLIFVVVFSINYASSTWCLRELEKILQLSQLFGKQILPIFYDVDPSDVRHQKGSYAEAFSKHEQRFQQDSQMVQRWRETLTHVANLSGWDVRQKPQSAEIKKIVRKIIKILDCKSSCVSKDLVGMDSPIQKLEKLLLLDSVDDVRVIGICGMGGIGKTTLATVLYDRISQYFSACCFIDDVSKICRLHDGPLGVQKKILDQILGQENHQICNQSNAANLRRRRLCRQRVLMILDNVGQVDQLEKIAVHREWLGAGSRIIIISRDEHILKQYGVDAVYQVLLLDRTNSLQLLCRKAFKLDHILNSYEGLVNGILHYANGLPLAIKVLGSFLFGRDVSEWRSALARLRESPEKDVMDVLRLSFDDLRETEKEIFLHIACFFNKLREKYVKNVLNCCEFHADIGLRVLIDKSLVSIEDETIVMHNLLEELGISIVAENTSKEPRKWRKLWFDKQFYDVMLENMEKNVEALVLGHYHEDVDKDMDGVIIEDFSNLRLLIINKYVNLSRSLNRLSNELRYIEWSHYPFMYLPSSFQPNQLVELILMRSSIKQLWEGKKNLPKLRILDLSQSENLTKMPDFGEFPNLEWLNLEGCIKLVQLDPSIELLRKIVFLNLNYCESLVSIPNNIFGLSSLEDLKMSGCSRCCFKEFNNTRDLDISETASHSQPASSICKWTTKPYYSLFPTPTINTVMSRSLRSIYCLREVDISYCGLSQLPEAIGCLRWLEMLNLGGNNFVTLPSLSELSKLVYLNLENCKRLESLPELPFPTSVEQDLRKNKYLKGTGLFIFNCPKIRDKERCSRMTFSWMTQFIQVNKEYPAFFNIGIVIPGSEIPRLFKNQSVGSSIHVSPVMQDKGNNIVGFLCCVVFSFAPHYPTMTRSWSHLTLYALDNILCLPLFVNGDLITVKSNHIWLIYFSWKSSYDDLYAPFHVETDISGGLDVEVKKCGYRWVYKQDLQEFNSSRMHPKKMLALKRKFLAIEDDAQPQPHLHSSR 2145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03514 2145 Gene3D - 352 435 IPR042197 -
Vivi5g03514 2145 Gene3D - 1440 1523 IPR042197 -
Vivi5g03514 2145 SUPERFAMILY L domain-like 1578 1925 - -
Vivi5g03514 2145 ProSiteProfiles TIR domain profile. 1103 1269 IPR000157 GO:0007165
Vivi5g03514 2145 PRINTS Disease resistance protein signature 1711 1727 - -
Vivi5g03514 2145 PRINTS Disease resistance protein signature 1304 1319 - -
Vivi5g03514 2145 PRINTS Disease resistance protein signature 1474 1488 - -
Vivi5g03514 2145 PRINTS Disease resistance protein signature 1381 1395 - -
Vivi5g03514 2145 SMART AAA_5 213 353 IPR003593 GO:0016887
Vivi5g03514 2145 SMART AAA_5 1301 1441 IPR003593 GO:0016887
Vivi5g03514 2145 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 183 - -
Vivi5g03514 2145 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1106 1931 IPR044974 GO:0006952
Vivi5g03514 2145 FunFam Disease resistance protein (TIR-NBS-LRR class) 1101 1271 - -
Vivi5g03514 2145 SMART till_3 1104 1244 IPR000157 GO:0007165
Vivi5g03514 2145 SMART till_3 16 156 IPR000157 GO:0007165
Vivi5g03514 2145 Pfam TIR domain 16 179 IPR000157 GO:0007165
Vivi5g03514 2145 Pfam TIR domain 1104 1271 IPR000157 GO:0007165
Vivi5g03514 2145 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Vivi5g03514 2145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 445 IPR027417 -
Vivi5g03514 2145 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 159 IPR035897 -
Vivi5g03514 2145 Pfam C-JID domain 1980 2108 IPR045344 -
Vivi5g03514 2145 Pfam C-JID domain 884 1012 IPR045344 -
Vivi5g03514 2145 Gene3D Ribonuclease Inhibitor 723 842 IPR032675 -
Vivi5g03514 2145 Gene3D Ribonuclease Inhibitor 1637 1798 IPR032675 -
Vivi5g03514 2145 Gene3D Ribonuclease Inhibitor 1799 1956 IPR032675 -
Vivi5g03514 2145 Gene3D Ribonuclease Inhibitor 520 715 IPR032675 -
Vivi5g03514 2145 SUPERFAMILY L domain-like 490 825 - -
Vivi5g03514 2145 ProSiteProfiles Leucine-rich repeat profile. 1877 1898 IPR001611 GO:0005515
Vivi5g03514 2145 Pfam NB-ARC domain 208 419 IPR002182 GO:0043531
Vivi5g03514 2145 Pfam NB-ARC domain 1289 1509 IPR002182 GO:0043531
Vivi5g03514 2145 Gene3D - 1101 1272 IPR035897 -
Vivi5g03514 2145 Gene3D - 12 184 IPR035897 -
Vivi5g03514 2145 Coils Coil 527 547 - -
Vivi5g03514 2145 Gene3D - 185 346 IPR027417 -
Vivi5g03514 2145 Gene3D - 1273 1434 IPR027417 -
Vivi5g03514 2145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1274 1533 IPR027417 -
Vivi5g03514 2145 SUPERFAMILY Toll/Interleukin receptor TIR domain 1101 1247 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03514 Vivi-Chr5 127345017 127356296 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03514 16 822 WRKY Transcription Factor Family AT4G12020 28.744 5.15e-74 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03514 - - vvo:131605388 4291.49