Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03510 ATGGCTAGCAGTAGCAGAAACCTCTCAATTTCAGCTCTGAGAAATTACTATTATGAAGTGTTTGTGAGCTTCAGAGGTGAAGACACTCGCTACAATTTCACCGATTTTCTTTTCCACGCTCTCCAAACACAAGGCATTTTTGCATTTAGGGATGACAGTAATCTTCCAAAAGGTCAATCCATAGGACCCGAGCTCCTTCATTCAATCGAACATTCTCAGATTTATGTTGTCGTCTTCTCAAGGAACTATGCTTCCTCAACTTGGTGCTTGCAAGAATTGGAAAGTATATGTGAATGCGTTCAAGTGTCTGGAAAACATATTCTTCCTGTTTTCTATGATGTTGATCCTTCTGACGTCAGACATCAAAAAGGAATTTATGCTCAAGCTTTTGCCAAACATGACTCTCAGATGGTGCCAAGATGGAGGGAAGCTCTAACACAGGTTGCCAATCTCTCTGGATGGGATCTTCGTCATAAGCCACAATCTGCAGCGATTAAAGAGATTGTTCAAAAGATAATTAACATATTGGATTGCAATATTTCATGTGTTTCAAAAGATTTAGTTGGTATGGATTCTCCTATCCAAGAATTAGAAAAGCTTTTACTTTTGGACTCGGTTCATGATGTTCGTGTGCTAGGAATTTGCGGGATGGGAGGAATAGGGAAGACAACTCTTGCTACTGTTTTATATGATCGAATCTCTCATCAATTCGGTGCTTGTTGTTTTATTGATGATGTAAGCAAAATTTATAGATTACATGATGGTCCACTCGGTGCACAAAAGCAAATTCTAGATCAAACTCTCGGACAAGAGCACCATCAGATATGCAATCATTACAACGCGACTAATCTCATACGACGTAGGCTATGTCGCCAAAGGGCCCTTATAATTCTTGATAATGTTGGTCAAGTCGAACAACTAGAAAAAATAGCTGTGCATCGTGAATGGTTAGGTGCTGGTAGTAGAATAATTATCATTTCTAGAGATGAGCATATATTGAAACAATATGGGATGGATGCAATTTACCAAGTTCCCCTCTTGGATTGGACTAACTCCTTTCAATTATTGTGTCGAAAAGCTTTCAAACTTGATCACATTTTGAATAATTACGAAGGGTTGGTTAATGGCATACTACATTATGCCAATGGCCTACCACTAGCAATTAAAGTATTGGGTTCATTTTTGTATGGTCGAGATATCTTTGAATGGAGAAGTGCATTGGCTAGATTGAGAGAAAGTCCAGACAAAGATGTTATGGATGTGCTGCGATTAAGTTTTGATGACCTAAGGGAGACAGAAAAAGAAATATTTCTTCATATTGCTTGTTTGTTCCATGGAAGTGATATGGAATATTTTAAAAACGTTTTAAATTGTTGTGAATTTCATGTTGATATTGGATTAAGGGTTCTCATTGATAAATCACTTTTAAGCATTGTAAACGAAAGTATTGTAATGCATAATTTGTTGAAAGAGCTAGGCAGAAATATTGTTTCAGAAAACACAAGCAAAGAGCCCAAGAAGTGGAGAAGGCTGTGGTTGGACAAACAACTCTATGAAGTAATGTTGGAAAATATGGAAAGGAATGTTGAAGCCATAGTTTTGGATTATCAATCTGAAGACTATGAAGATATGGATGCAGTTCTATTCGAAAACTTTTCAAATCTTAGATTGCTCATCATAAATAATGTGGACGTATCGGGAAGCCTTAATTATCTTTCTAACGAATTGAGATATATTGAGTGGACGGAATATCCTTTCATGTGTATGCCATCAAGTTTTAAGCCCAATCAACTTGTTAAGTTGATATTGAAGTATAGCAGCATCAAACAACTCTGGGAAGGCAAGAAGAATCTGCCCAAATTGAGAATCTTGGATCTGAGCCACTCCAAAAATTTAATAAAGATGCCAGATTTTGGAGAGTTCCCGAATCTTGAGCGGCTAAATCTTGAAGGATGTACTAAACTTGTGCTGTTGGATCCATCTATTGGGCTTCTAAAAAAGATTGTTTCCTTGAATTTAGAAGATTGCAAAAGTGTAGTAAGCATACCCAACAACATATTTGGTCTCAGCTCTCTTAAAGATCTAAATCTGTCTGGGTGTTGTTTCAAAGAGTTTAACAATACAAGGCACTTGAATATATGTGAAAGTGCATCACATTCTCAATTAATTTCCTCCATCTGTAATTGGACCACAAAACCTTACCATTCCTTGTTACCCACTCCCACAACAGAAACAATAATGTTTCCTTCCTTGCTTAGCTTATATTGTTTACGTGAAGTTGATATTAGCTATTGTGGTTTAAGCCAACTCCCAGAGGCTATTGGATGTTCACGTTGGTTAGAAATGTTAAATCTTGGGGGGAACAATTTTGTGACACTGCCTACCCTTAGGGAGCTTTCCAAACTTGTATATTTGAACTTGGAGAATTGCAAGCAATTGGAATCTTTGCCAGAGCTTCCTTTTGCTGCTACTATCGAGCAGGATCTTCATAAGAGCAAATATTGGATGAGAATAGGATTGTTCATTTTTAACTGTCCTAAAATAAGTGATAAGGAACAATGCAGTAGAATGACATTTTCATGGATGACACAATTCATTCAAGTGAACAGAGAATACCCTGCCTTCTTCTACATTGGTATTGTCATTCCAGGAAGTGAAATGCCAAGTTGGTTCAACAATCAGAATGTTGGTAGTTCAATACCTGTATCTTCTGTTATGCAGGACAAGGGCAATAGTATTGTTGGCTTTTTATGTTGTGCAGTGTTTTCTTTAGCACCTCATTATCCAACAATGACAAGTAGTTCTCGATGGAAACCTCCGGCCCAGATGACAATGCATGCATTAAACAACATTGCCTTTCTTCCAATATTTGTTGATGAAGATCTTATTACTGTCAAATCAAATTACATCTGGCTAATCTATTTTCCTTGGAAGTCATCCTATGATGTTGTGGATCATCGTTTACGTGTTGAAGCTCATATGTATGGATGCTTGGATGTGGAGGTAAAGAAATGTGGGTATCATTGGGTATATAAACAAGATCTACAAGAGTTCAACTCAACAATGATGCATCCCGAAAATATGTTAACTCTGAAACGCAAGTTTTTGGCAATTGAAGATGAGACACAACCACAACTACACTCTCGGATGGCTATGGCAAGCGGCAGCAGCTCCTCCTCTTCGGCTCTGGTAAAACTGCCATTGAGGAAGAATTTTGATGTGTTTGTGAGTTTCAGAGGTCAAGATACTCGCTTCAATTTCACAGATCATCTTTTTGCTGCCTTTGAAAGTAAAGGTATTTTTGCGTTTAGGGATGACAATAATCTTCAAGAGGGAGAATCCATAGGACCTGAACTCCTTCGTGCAATCGAAAACTCTCTGATTTTCGTTGTGGTCTTCTCTATCAACTATGCTTCTTCAACTTGGTGCTTGCGAGAATTAGAACATATCCTTCAATTAAGTCAATTATTTGGAAAACGAATTTTGCCTATTTTCTATGATGTTGATCCGTCTGAAGTTAGACAACAAAAAGGAAGCTATGCTGAAGCCTTTTCCAAACATGATCAAAGGTTTAAACAAGACTCTCAAATGGTGCAAAGATGGAGGGAAACTTTAACACAGGTTGCCAATCTCTCCGGTTGGGATGTTCGACAAAAGCCACAGTCCGCAGAGATTAAAAAGATTGTTCAAAAGATAATCAGTATATTGGATTGCAAATCTTCATGTGTTTCAAAAGATTTAGTTGGTATGGATTCTACTATGCAAGAATTAGAAAAGCTTTTACTTTTGGACTTGGTTAATGATGTCCGTGTGGTAGGAATTTGCGGGATGGGAGGAATAGGGAAGACAACTCTTGCTACTGTTTTATATGATCGAATCTCTCCACAATTTGGTGCATGTTGTTTTATTGATGATGTAAGCAAAATTTATAGATTACATGATGGTCTACTCGGAGTACAAAAGCAAATTCTAGATCAAACTCTTGGCCAAGAGAACCATCGGATATGCAATCATTACAACGCGACTAATCTGATACGATACAGGCTACGTCGTCAAAAGGCCCTTATGATTCTTGATAATGTTGATCACATTGAACAACTAGAAAAAATAACCGTGCATCGTGAATGGTTAAGTGCCGGTAGTAGAATCATTATCATTTCTAGAGATGAGCATATATTGAAACAGTATGGGGTGGATGAAGTTTACCAAGTTCCTCTCTTAGATTCGACTAACTCTTTTCATTTATTCTGTCGAAAAGCTTTCAAACTTGATCACATTTTGAGTAGTTATGAAGGGTTGGTTAATGACATACTATATTATGTCAATGGCCTTCCACTAGCAATTAAAGTATTGGGTTCATTTTTGTATGGTCGAGATATCTCTGAATGGGAAAGCGCATTGACTAGATTACTAAAAAGTCCAGACAAAGATGTCATGGATGTGTTGCGATTAAGTTTTGATGGGCTAAGGGAGACAGAAAAAGAACTATTTCTTCATATTTCTTGTTTTTTCAACGAGTTGATGGAAAAATATGTTAAAAATGTTTTAAATTGTTGTGAATTTCATGCTGATATTGGGTTAAGGGTTCTCATTGATAAATCACTTGTAAGCATTGCAGATGAAAAGATTGTAATGCATAATTTGTTGGAAGAGCTAGGCAGAAATATTGTTGCAGAATACACAAGTAAAGAGCCCAGAAAGTGGAGAAGGTTGTGGTTTGACAAACAATTCTACGATGTTATGTTGGAAAATATGGAAAATAATGTTGAAGCCATAGTTTTGGATCATGAATATGAAGACTATAGTGAGGTTGATGAAGATATGGATGCAGTGATATTTGAAGACTTTTCAAATCTTAGATTGCTCATCATTGATCATGTGAATGTATCGGGAAGCCTCAACCGTCTTTCTAACGATTTGAGATATATTGAGTGGAGTGGATATTCTTTCATGTATTTACCATCAAGTTTTCAACCCAATCAACTTGTTGAGTTGATATTGAAGTATAGCAGTATCAAACAACTCTGGGAAGGCAAGAAGAATCTGCCCAAATTGAGAATATTGGATCTGAGCCACTCCGGAAATCTAATAAAGATGCCAGATTTTAGAGAGTTCCCGAATCTTGAGCGACTAAATCTTAAAGGATGTATTAAACTTGTGTCGTTGGATCCATCTATTGGGCTTCTAAGAAAGATTGTTTCCTTGAACTTAGAAGATTGCAAATGTCTAGTAAGCATACCCAACAACATATTTGGTCTCAGCTCTCTTAAAGATCTAAAAATGTCTGGGTGTTCTCGATGTTGTTTCAAAGAGTTTAACAATACAAGGCATTTGGTTACAAGTGAAAGTGCTTCACATTCCCAATCAACGTCCTCCATCAACAAATGGACCACAAAGCTTTACCATTCCTTGTTTCCCCCTCCCATAACCAACACAGTTATGTTTCCTTCCTTGCTTAGCATATATTGTTTACGTGAAGTTGATATTAGCTATTGTGGTTTAAGCCAACTCCCAGAGGCTATTGGATGTTTACGTTCGTTAGAAATGTTAAATCTTGGGGGGAACAATTTTGTGACACTGCCTAGCCTTAGGGAGCTTTCCAAACTAGTACGTTTGAGCTTGGAACATTGCAAGCGGTTGGAATCTTTGCCCGAGCTTCCTTTCCCTACCACTATCCAGCAGGATCTTCGAATGATCAAATATTGGAAGAGATTAGGATTGTTCATTTTCAACTGTCCTAAAATAAGTGATAAGGAACGATGCAGTAGGATGACATTTTTATGGATGACACAATTCATTCAAGTGAACAGAGAATACCCTGCCTTCTTTAATGTTGGTATTATCATTCCAGGAAGTGAAATACCAAGTTGGTTCAACAATCAGTGCGTTGGTAGTTCAATTCCTGTATCTCTTGTTATGCAGGACAAGGGCAATAGTATTGTTGGCTTTTTATGTTGTGCAGTATTTTCTTTCGCACCTCATTATCCAAGAATGACAAAAAGTTCTCAATGGAGACCTCATGCCCTGATTACACTGTATGCACTAAACAACATTGCCTCTCTACCAATATTTGTCAATGGAGATGTTATTAGTGTCAAATCAAATCACATATGGCTAACCTATTTCCCTTGGGATTCATCCTATAATGTTCTTTATGATGGTTTCCATGTTGAAACTAATAGCAATGGAGGCTTAGATGTGGAGGTGAAGAAATGTGGGTATCGTTGGGTGTATAAACAAGATCTACAAGAGTTCAACTCAACAATGATGTATCCCGGAAATATGTCAGCTCTGAAGCGCAAGTTTTTGGCAATTGAAGATGAGAAACAACCACAACTACACTCATTCAGACGATGA 6357 0.3739 MASSSRNLSISALRNYYYEVFVSFRGEDTRYNFTDFLFHALQTQGIFAFRDDSNLPKGQSIGPELLHSIEHSQIYVVVFSRNYASSTWCLQELESICECVQVSGKHILPVFYDVDPSDVRHQKGIYAQAFAKHDSQMVPRWREALTQVANLSGWDLRHKPQSAAIKEIVQKIINILDCNISCVSKDLVGMDSPIQELEKLLLLDSVHDVRVLGICGMGGIGKTTLATVLYDRISHQFGACCFIDDVSKIYRLHDGPLGAQKQILDQTLGQEHHQICNHYNATNLIRRRLCRQRALIILDNVGQVEQLEKIAVHREWLGAGSRIIIISRDEHILKQYGMDAIYQVPLLDWTNSFQLLCRKAFKLDHILNNYEGLVNGILHYANGLPLAIKVLGSFLYGRDIFEWRSALARLRESPDKDVMDVLRLSFDDLRETEKEIFLHIACLFHGSDMEYFKNVLNCCEFHVDIGLRVLIDKSLLSIVNESIVMHNLLKELGRNIVSENTSKEPKKWRRLWLDKQLYEVMLENMERNVEAIVLDYQSEDYEDMDAVLFENFSNLRLLIINNVDVSGSLNYLSNELRYIEWTEYPFMCMPSSFKPNQLVKLILKYSSIKQLWEGKKNLPKLRILDLSHSKNLIKMPDFGEFPNLERLNLEGCTKLVLLDPSIGLLKKIVSLNLEDCKSVVSIPNNIFGLSSLKDLNLSGCCFKEFNNTRHLNICESASHSQLISSICNWTTKPYHSLLPTPTTETIMFPSLLSLYCLREVDISYCGLSQLPEAIGCSRWLEMLNLGGNNFVTLPTLRELSKLVYLNLENCKQLESLPELPFAATIEQDLHKSKYWMRIGLFIFNCPKISDKEQCSRMTFSWMTQFIQVNREYPAFFYIGIVIPGSEMPSWFNNQNVGSSIPVSSVMQDKGNSIVGFLCCAVFSLAPHYPTMTSSSRWKPPAQMTMHALNNIAFLPIFVDEDLITVKSNYIWLIYFPWKSSYDVVDHRLRVEAHMYGCLDVEVKKCGYHWVYKQDLQEFNSTMMHPENMLTLKRKFLAIEDETQPQLHSRMAMASGSSSSSSALVKLPLRKNFDVFVSFRGQDTRFNFTDHLFAAFESKGIFAFRDDNNLQEGESIGPELLRAIENSLIFVVVFSINYASSTWCLRELEHILQLSQLFGKRILPIFYDVDPSEVRQQKGSYAEAFSKHDQRFKQDSQMVQRWRETLTQVANLSGWDVRQKPQSAEIKKIVQKIISILDCKSSCVSKDLVGMDSTMQELEKLLLLDLVNDVRVVGICGMGGIGKTTLATVLYDRISPQFGACCFIDDVSKIYRLHDGLLGVQKQILDQTLGQENHRICNHYNATNLIRYRLRRQKALMILDNVDHIEQLEKITVHREWLSAGSRIIIISRDEHILKQYGVDEVYQVPLLDSTNSFHLFCRKAFKLDHILSSYEGLVNDILYYVNGLPLAIKVLGSFLYGRDISEWESALTRLLKSPDKDVMDVLRLSFDGLRETEKELFLHISCFFNELMEKYVKNVLNCCEFHADIGLRVLIDKSLVSIADEKIVMHNLLEELGRNIVAEYTSKEPRKWRRLWFDKQFYDVMLENMENNVEAIVLDHEYEDYSEVDEDMDAVIFEDFSNLRLLIIDHVNVSGSLNRLSNDLRYIEWSGYSFMYLPSSFQPNQLVELILKYSSIKQLWEGKKNLPKLRILDLSHSGNLIKMPDFREFPNLERLNLKGCIKLVSLDPSIGLLRKIVSLNLEDCKCLVSIPNNIFGLSSLKDLKMSGCSRCCFKEFNNTRHLVTSESASHSQSTSSINKWTTKLYHSLFPPPITNTVMFPSLLSIYCLREVDISYCGLSQLPEAIGCLRSLEMLNLGGNNFVTLPSLRELSKLVRLSLEHCKRLESLPELPFPTTIQQDLRMIKYWKRLGLFIFNCPKISDKERCSRMTFLWMTQFIQVNREYPAFFNVGIIIPGSEIPSWFNNQCVGSSIPVSLVMQDKGNSIVGFLCCAVFSFAPHYPRMTKSSQWRPHALITLYALNNIASLPIFVNGDVISVKSNHIWLTYFPWDSSYNVLYDGFHVETNSNGGLDVEVKKCGYRWVYKQDLQEFNSTMMYPGNMSALKRKFLAIEDEKQPQLHSFRR 2118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03510 2118 Pfam C-JID domain 882 1015 IPR045344 -
Vivi5g03510 2118 Pfam C-JID domain 1949 2082 IPR045344 -
Vivi5g03510 2118 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 154 IPR035897 -
Vivi5g03510 2118 SMART AAA_5 208 347 IPR003593 GO:0016887
Vivi5g03510 2118 SMART AAA_5 1268 1444 IPR003593 GO:0016887
Vivi5g03510 2118 Pfam Leucine Rich Repeat 1661 1680 IPR011713 -
Vivi5g03510 2118 Pfam NB-ARC domain 200 414 IPR002182 GO:0043531
Vivi5g03510 2118 Pfam NB-ARC domain 1266 1472 IPR002182 GO:0043531
Vivi5g03510 2118 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 440 IPR027417 -
Vivi5g03510 2118 PRINTS Disease resistance protein signature 1680 1696 - -
Vivi5g03510 2118 PRINTS Disease resistance protein signature 1271 1286 - -
Vivi5g03510 2118 PRINTS Disease resistance protein signature 1348 1362 - -
Vivi5g03510 2118 PRINTS Disease resistance protein signature 1441 1455 - -
Vivi5g03510 2118 Gene3D Ribonuclease Inhibitor 1797 1902 IPR032675 -
Vivi5g03510 2118 ProSiteProfiles Leucine-rich repeat profile. 779 800 IPR001611 GO:0005515
Vivi5g03510 2118 ProSiteProfiles Leucine-rich repeat profile. 1846 1867 IPR001611 GO:0005515
Vivi5g03510 2118 SUPERFAMILY L domain-like 1545 1894 - -
Vivi5g03510 2118 FunFam Disease resistance protein (TIR-NBS-LRR class) 1068 1238 - -
Vivi5g03510 2118 Gene3D - 12 178 IPR035897 -
Vivi5g03510 2118 SMART till_3 17 151 IPR000157 GO:0007165
Vivi5g03510 2118 SMART till_3 1071 1211 IPR000157 GO:0007165
Vivi5g03510 2118 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 833 IPR044974 GO:0006952
Vivi5g03510 2118 Gene3D - 1069 1233 IPR035897 -
Vivi5g03510 2118 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1241 1500 IPR027417 -
Vivi5g03510 2118 Gene3D - 179 341 IPR027417 -
Vivi5g03510 2118 Gene3D - 1234 1402 IPR027417 -
Vivi5g03510 2118 Gene3D Ribonuclease Inhibitor 742 824 IPR032675 -
Vivi5g03510 2118 Gene3D Ribonuclease Inhibitor 1605 1794 IPR032675 -
Vivi5g03510 2118 Gene3D Ribonuclease Inhibitor 532 708 IPR032675 -
Vivi5g03510 2118 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 178 - -
Vivi5g03510 2118 ProSiteProfiles TIR domain profile. 1070 1236 IPR000157 GO:0007165
Vivi5g03510 2118 SUPERFAMILY Toll/Interleukin receptor TIR domain 1069 1214 IPR035897 -
Vivi5g03510 2118 Gene3D - 347 430 IPR042197 -
Vivi5g03510 2118 Gene3D - 1407 1490 IPR042197 -
Vivi5g03510 2118 SUPERFAMILY L domain-like 485 820 - -
Vivi5g03510 2118 Pfam TIR domain 1071 1242 IPR000157 GO:0007165
Vivi5g03510 2118 Pfam TIR domain 18 177 IPR000157 GO:0007165
Vivi5g03510 2118 ProSiteProfiles TIR domain profile. 16 176 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03510 Vivi-Chr5 127287787 127298954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03510 188 816 WRKY Transcription Factor Family AT5G45050 31.085 4.83e-77 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03510 - - vvo:131605388 3340.05