Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03509 ATGGCTTCAAACAGAAGTAATAGTACTAGTAGTACCATCCAAAGTAGCAGCAGTTTCTCTACAGCTATGATGACATTCCCAAATAATGATTATTATGACGTTTTCGTTAGCTTCAGAGGTAAAGACACACGGCATAGCTTCACAGATCATCTTTTTGGTGCCCTCCGAAGAAAAAGCATTGCCGCATTCAGGGATGATACAGCTCTCAACAGAGGTGAATCCATAGCACCTGAGCTGCTTCGCGCAATTGAAGGATCTCAGATTTTTATTGTGGTCTTCTCTAAGAACTATGCTTCCTCAATTTGGTGCTTGCAAGAATTGGAAAACATTCTTCAATGTGTTCAACTATCGAAAAAACGTGTTTTGCCTGTTTTCTATGATGTTGGTCCATCTGATGTTCGATGTCAAAGAGGATGTTATGCAGAAGCCCTTGCCAAACATGAAGAAAATTATGACTTAGAGATGGTGCAAAGATGGAGGGTAGCTCTCTCGCAAGCCGCCAATCTCTCTGGATGGGATCTACGTAATAAGCCACAATATGCAGAGATTGAAATGATTGTTCAGGAGATAATACATATGTTTGGTTACAAATTTTCATGTCTTCCAAATGATTTAGTTGGAATGCTTTCTCCGGTAGAGGAATTGGAAATGTGTTTACTTTTGGACTCCGTTGATGATGTTCGGACTGTTGGAATTTGTGGAATGGGTGGAGTAGGGAAGACTACTCTTGCAGGTGTTTTATATGGCCGAATCTCTCATCAGTTTGATGCATGCTGTCTTATTGATGATGTAAGCAAAGTTTTTAAATATTACGGTCCAATCGGTGTACAAAAGCAAATTCTACATCAAACTCTAGGCGAAGAACACAATCAAATATATAATCTTCACGACGGAACTAATTTGATACAAAATAGGCTATGCCGTCGTAGATCTCTTATAATTTTTGACAATGTTGATCACAATGAACAGTTGGAGAAACTAGCTGTGAATCCTAAATCGTTAGCTGCAGGAAGTAGAATCATTATAGTTTCAAGAGATACTCATATTTTGAAAGAGTATGGAGTGAACACACTTTACAAAGTTCAGCCCTTGAATCAGACAAACTCTCTTCAGTTATTTTGTCGAAAAGCTTTCAAATGTGATAACATTATGAATGATGCTTATAAGGAGTTGACATATGACATATTGAATATTGCTCGTGGCCTACCATTAGCGATTAAAGTGATAGGTTCATTTTTGTTTGGTCGAAGTATCTCTGAATGGAGAAGCGCTCTTACTAGATTGCGAGAAAGTCCAAATAAATATATTATGGACGCACTTCAGTTTAGTTTTTATGGGCTAGAGGAAATGGAATTACAAATGTTTCTTGATATCGCTTGTTTTTTCAACGGGAGTGAGGAAAACTTTGTTAAAAATGTTTTGAATTGTTGTGGATTTCATCCTGATATTGGACTAAGAGTTCTGGTTGATAAATCACTCATAAGCATTTCAGATGAAAGTAAAATTGAAATGCATGGTATGTTGGAAAAGTTAGGAAGAAAGATTGTTCAAGAAAATTCAACAAAAGAGGCCAGGAAGTGGAGTAGGTTGTGGCTCCACAAATATTGCTACAATGTTATGTCAGAGAATATGGAAAAGAATGTTGAAGCCATAGTTTTGAATGGAAATGAAAGAGATACAGAAACATTGATGGCCGAGGCTCTGTCAAATATGAGTCGTCTTAGATTGCTCATACTCAAGGATGTTAAGTTTTTAGGAAGCCTCAACAATCTTTCTAATCAACTAAGATATGTTGCATGGAATGGCTATCCTTTCATGTATTTGCCATCGAGTTTTCAGCCCAATCAACTTGTTGAATTGATTTTGGTGGATAGTAACGTCGAACAACTATGGGAAGACAAGAAGGATCTGCCTAATTTGAGGACTTTGGATTTAAGCTACTCCAAAAATTTAATGCGGATGCTAGATTTTGGACATGTCACGAATCTTGAACGGCTAAACCTTGAAGGATGCGTAAAGCTTGTGGAGTTAGATCCATCAATTGGTCTTGCAAAGAAGCTTGTTTTCTTGAATTTGAAAAATTGCAAAAGTCTTATATGCATACCTAACTGCATATATGATCTCAACTCTCTTGAATATTTAAATCTTTGCAGTTGTTCCGAAGCGTTTAACAATCCATGCCATTTCGAGTTACCTTCCTTGGCTAGCTTATCTTGTTTGCGCGAAGTTGATTTGAGTTTTTGCGGTCTAAGCCAACTCAGTGAAACTATTAGATGTCTAAGTTGTCTGCAAAGATTGAATTTAGGAGGAAACAATTTTGTGACATTGCCGAGCTTGAAGGAGCTTTCGAAACTCGTATATTTGAACCTAGAGCATTGCAATCTGTTAAAATCTTTGCCTGATCTTCCTTCACCAGCTGCCATAAAGCAAGATGAATATTGTAGAGTGGGAATGTATATTTTCAACTGTCCTGAATTGAGTGAGACTGAGACGGAAAGTTGCAGTAGCATAACTTTGTCATGGATGATGCAATTCATTCTAGCAAACCAAGAATCATCTGCATCCTTTGATCATTGGGTTGAAATCGTTACACCAGGAAGTGAAATACCAAAGTTGTTCAACAATCAAAAGGCGGGTGAATCAATAAGCATAGATCCATCCTGCATTATAGATGACAATAATGCCATTGGCATTGTTTGTTGTGTAGTGTTTTCTGTGGCATCTCATGATCCAACTGCAACAACAAATGAACAGAAACTCGTCTTACTTCTAAGATTTCATAGAGATGAACAGGAACGTCATTTTAACATTCCAGTAAATACAAATCTTGTTATAGTCCAATCATCTCACTTGTGGCTAACCTATTTCACTAAGGAATTATTCTTTCACATTCTGGAAGATATAGGCCATAAAGTCGGCGATGAATTCAGAATGGAAGCGTCCCTTGTAGACATCAAAGGTTTGGATGTAGAGGTGAAGAGTTGTGGGTACTGCTGGGTATGTAAAAATTCAACTTGA 3018 0.3751 MASNRSNSTSSTIQSSSSFSTAMMTFPNNDYYDVFVSFRGKDTRHSFTDHLFGALRRKSIAAFRDDTALNRGESIAPELLRAIEGSQIFIVVFSKNYASSIWCLQELENILQCVQLSKKRVLPVFYDVGPSDVRCQRGCYAEALAKHEENYDLEMVQRWRVALSQAANLSGWDLRNKPQYAEIEMIVQEIIHMFGYKFSCLPNDLVGMLSPVEELEMCLLLDSVDDVRTVGICGMGGVGKTTLAGVLYGRISHQFDACCLIDDVSKVFKYYGPIGVQKQILHQTLGEEHNQIYNLHDGTNLIQNRLCRRRSLIIFDNVDHNEQLEKLAVNPKSLAAGSRIIIVSRDTHILKEYGVNTLYKVQPLNQTNSLQLFCRKAFKCDNIMNDAYKELTYDILNIARGLPLAIKVIGSFLFGRSISEWRSALTRLRESPNKYIMDALQFSFYGLEEMELQMFLDIACFFNGSEENFVKNVLNCCGFHPDIGLRVLVDKSLISISDESKIEMHGMLEKLGRKIVQENSTKEARKWSRLWLHKYCYNVMSENMEKNVEAIVLNGNERDTETLMAEALSNMSRLRLLILKDVKFLGSLNNLSNQLRYVAWNGYPFMYLPSSFQPNQLVELILVDSNVEQLWEDKKDLPNLRTLDLSYSKNLMRMLDFGHVTNLERLNLEGCVKLVELDPSIGLAKKLVFLNLKNCKSLICIPNCIYDLNSLEYLNLCSCSEAFNNPCHFELPSLASLSCLREVDLSFCGLSQLSETIRCLSCLQRLNLGGNNFVTLPSLKELSKLVYLNLEHCNLLKSLPDLPSPAAIKQDEYCRVGMYIFNCPELSETETESCSSITLSWMMQFILANQESSASFDHWVEIVTPGSEIPKLFNNQKAGESISIDPSCIIDDNNAIGIVCCVVFSVASHDPTATTNEQKLVLLLRFHRDEQERHFNIPVNTNLVIVQSSHLWLTYFTKELFFHILEDIGHKVGDEFRMEASLVDIKGLDVEVKSCGYCWVCKNST 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03509 1005 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 32 825 IPR044974 GO:0006952
Vivi5g03509 1005 SUPERFAMILY L domain-like 560 804 - -
Vivi5g03509 1005 SMART till_3 31 169 IPR000157 GO:0007165
Vivi5g03509 1005 ProSiteProfiles Leucine-rich repeat profile. 762 783 IPR001611 GO:0005515
Vivi5g03509 1005 Gene3D Ribonuclease Inhibitor 513 725 IPR032675 -
Vivi5g03509 1005 PRINTS Disease resistance protein signature 635 651 - -
Vivi5g03509 1005 PRINTS Disease resistance protein signature 229 244 - -
Vivi5g03509 1005 PRINTS Disease resistance protein signature 399 413 - -
Vivi5g03509 1005 PRINTS Disease resistance protein signature 305 319 - -
Vivi5g03509 1005 ProSiteProfiles TIR domain profile. 30 194 IPR000157 GO:0007165
Vivi5g03509 1005 Pfam NB-ARC domain 223 434 IPR002182 GO:0043531
Vivi5g03509 1005 Gene3D - 29 195 IPR035897 -
Vivi5g03509 1005 SUPERFAMILY "Winged helix" DNA-binding domain 436 539 IPR036390 -
Vivi5g03509 1005 Gene3D - 196 358 IPR027417 -
Vivi5g03509 1005 Gene3D Ribonuclease Inhibitor 726 875 IPR032675 -
Vivi5g03509 1005 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 201 458 IPR027417 -
Vivi5g03509 1005 FunFam Disease resistance protein (TIR-NBS-LRR class) 28 195 - -
Vivi5g03509 1005 Pfam C-JID domain 865 1002 IPR045344 -
Vivi5g03509 1005 SUPERFAMILY Toll/Interleukin receptor TIR domain 27 172 IPR035897 -
Vivi5g03509 1005 Gene3D - 363 448 IPR042197 -
Vivi5g03509 1005 Pfam TIR domain 32 177 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03509 Vivi-Chr5 127245465 127249079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03509 26 801 WRKY Transcription Factor Family AT4G12020 30.276 1.59e-88 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03509 - - cam:101502375 1459.12