Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03484 ATGGCATTGGCTTGCAATACCCTCCAAAGTGGCTCTTCATCTAGGATGAGATGGAAATATGATGTGTTTGTGAGCTTCAGAGGTGAAGACACTCGCAACAATTTCACCGATCATGTTTTTGGCGCTCTTCATAAAAAAGGTATTATTACCTTCAGGGATGATGCAAAGCTCAAGAAAGGGGAACATATATCATTTGAGCTTCTACAAGCCATTGAAGGATCCCAAATTTTGATTGTTATTTTCTCAAGAAATTATGCTGCTTCCACGTGGTGCTTGCAAGAACTCGCTAAAATTGCTGACTGCATTCATGTTCAAGGACAATCTGTTTTACCTATTTTCTTTGATGTCAGCCCTTCTGAGGTACGAAAGCAAACCGGAGGTTACGAAAAAGCCTTTCAAGAGCATGAAGAAAGATTCAAAGCAAATTTAGAGGAACTGCAAAAATGGAGGAGAGCCCTAACACAAGTAGCCAATCTCTCTGGTTGGGATGTAAGGGATAAGCCACAATATGCAGAGATTGGAAAAATTATTAAAGAGGTAACATGCTTGTTGGGAAATAAATCTTTAAATTTACCTAGGGATATAGTTGGTATGCACTCAAGAGTGGAAGAATTAGAAAACCTTCTGATTTTGGACTCAGATGATGATGATGTTCGAGTTGTAGGGATTTGTGGAATGGGTGGAATAGGGAAGACAACTCTTGCTACTGCTTTGTATGCTAGAATCTCCAATCAATTTGATGCTTGTTGCTTTATTGATGATGTAAGTAAAATTTATGGAGATCACGGCCCAATTGGAGTACAAAAGCAACTTCTTTGTCAAACTCTAAATGAAGAAAATCTTCATATATGCAATCTTCCTATGGCATCTAATTTGATTCGAACTAGGCTATGTCGAATAAAATCCCTTGTTGTTCTTGATAATGTTGATGAAGTTGAACAACTGGATAAATTGGACATGAAAAGAGAATGGCTAGGCACAGGGAGTAGAATAATCATAATTTCTAGAAATGAGCATATCTTGAGAGAGCATGGAGTAGATGAAGTATATAGAGTTCCACTTTTGGATCGTAAATATGCCCTTCAATTGTTTTGTAGGAAAGCTTTCAAAAGTGATGATATCATGAGCGGTTACATCTACTTGACATATGATGTGCTAAACTATGCTCGTGGCCTTCCACTAGCGATTAAAGTGTTGGGCTCGTTTCTGTATGGCCGAGATGTCTCTCAGTGGAGAAGTGTATTGTCAAGATTAAGAGAGAACCCAAGGACAGATATTATCAATGTACTCCGAATTAGTTTTGATGGACTAGAGGATACGGAAAAGGATATATTTCTAGATATTGCTTGTTTCTTTCATGAAAAAGATGAAACATACGTGAAGAGAGTTTTAGATTTTCGTGGATTTCATCCTGAAATTGGTTTCAGAGTTCTCATTGATAAATCGTTCATAACATGTGAGAAGCAGAAAATTTGTATGCATGATTTGTTCAGAGAATTGGGAAAGAGTATCGTTAGAGAAAAATCACCCAAAGAACCAAGAAAGTGGAACAGGTTGTGGGACTACAAGGATGTCCACAGTGTTATCTCCGAAAACATGGCAACAGAAAGCCTTGAAGCCATAATGTTGCAGCGTTGTCCAGAAATCGACGGAGAAATACAAGAGATGACAACATTGAGGGCTGAAGGTTTAGCACAAATGAGACACCTTAAATTGCTGATGCTATGGAATTTGAATTTCTCAGGAAGTCTCAATTTTCTTTCAAGTGAATTGGGGTATCTTTGTTGGGGTAAATACCCTTTCACTTGTTTGCCATCAAGTTTTCAGCCAGATAGACTTGTCGAACTGATCCTACCTCATAGCAACATCGCACAACTATGGGAGGGCACAAAGTTTCTACCTAGTTTGACACGTATTGATCTCTCTCACTCGAAAAATCTTATTAAGATGCCAAATTTTAAGGAGATTCCAAATCTTGAGTGCCTAGGTCTTGAAAGATGTATAAAACTAGTGAAGATTGATCCATCCATTGGTACCTTAAAAAGGCTTTCCAGATTAGACTTGAAAAATTGTACAAATCTGGTCAGTATTCCTATCAACATTTTTTGTCTGAGCTCTCTCATATTTCTAAGACTCTCAGGATGTCCAAATTTATTTAATAAAAAACGGTTAGAAATACAAAAACAAATAGACCAACAGGAGATAATTGATAATAAGGAAAGTACTACCCAATACCAACCAACATCTTTCATCTACAAATTTCTAAAGTCGCACTTTCGATATTTGATTTTTGGAAAACCTGAAGATTCAGTTGGTTTGTTGTTGCCTTCATTGTCTCGTTTGTCATGTTTGCAATATCTTAACCTGAGTTTCTGCAACCTTTTTCAAATCCCTAATGCAATTGGGTTGTTACATTGCTTGGAAATTCTATATTTGGGGGGAAACAATTTTGTGATACTGCCTTCTAACATCAAGGAACTTTCCAAACTTAGAAGACTAAACTTGCAGCACTGTAAGCAGCTGAAATATTTGCCTGAGCTCCCATCAAAGAATGTCTTGCCAATAAGAAGAACAACACATTTAAGAACTGTCGTTGAATTTAATATCTTTGACTGCCCGAGTATAATTGATATGGAGTGCTGTTATAGAATGGCCTTTTCTTGGATGATACAATTTCTTCAGATGCACATGCAATCCGACATCCCAGTCGAACAGATTACAATTGTTATTCCAAAAACTGAAATTCCAATGTGGCTCGACAAACAAAATGCAGGCAGTTCAATAAGCATCGATCCATCACCCATTATGCATGACAAGAATTGGATAGGCGTTGTTTGCTACTTAACATTTGTAGCACATAATAATCCGACTACTTTAAGTAAAGAACAACCTCGTATTTACTTTGGTTTTCAAAGTAAACAGCATGGTCGTGGGAACTATTCAATTATTCCCATTCGTCTTGAAAAAGATCTGGTCACAGTTGATTTAGATCACTTGTTGCTAATTTTTTTCAGTAGGGAGGACTTTATTGGTTATTATATGAGCTATCTAACAGAGGCGTTGCATGATATTAGTAGTATTGAATTGAGAGCTATTGTTAGGCAGCCCCTTGGATTGCACTTGGAGGTCAAAAATTGTGGTTATCGTTGGATATATAAAGAAGATCTGGAACAATTAAACCCACAAATGATGTACAATGGAAATTAA 3207 0.3711 MALACNTLQSGSSSRMRWKYDVFVSFRGEDTRNNFTDHVFGALHKKGIITFRDDAKLKKGEHISFELLQAIEGSQILIVIFSRNYAASTWCLQELAKIADCIHVQGQSVLPIFFDVSPSEVRKQTGGYEKAFQEHEERFKANLEELQKWRRALTQVANLSGWDVRDKPQYAEIGKIIKEVTCLLGNKSLNLPRDIVGMHSRVEELENLLILDSDDDDVRVVGICGMGGIGKTTLATALYARISNQFDACCFIDDVSKIYGDHGPIGVQKQLLCQTLNEENLHICNLPMASNLIRTRLCRIKSLVVLDNVDEVEQLDKLDMKREWLGTGSRIIIISRNEHILREHGVDEVYRVPLLDRKYALQLFCRKAFKSDDIMSGYIYLTYDVLNYARGLPLAIKVLGSFLYGRDVSQWRSVLSRLRENPRTDIINVLRISFDGLEDTEKDIFLDIACFFHEKDETYVKRVLDFRGFHPEIGFRVLIDKSFITCEKQKICMHDLFRELGKSIVREKSPKEPRKWNRLWDYKDVHSVISENMATESLEAIMLQRCPEIDGEIQEMTTLRAEGLAQMRHLKLLMLWNLNFSGSLNFLSSELGYLCWGKYPFTCLPSSFQPDRLVELILPHSNIAQLWEGTKFLPSLTRIDLSHSKNLIKMPNFKEIPNLECLGLERCIKLVKIDPSIGTLKRLSRLDLKNCTNLVSIPINIFCLSSLIFLRLSGCPNLFNKKRLEIQKQIDQQEIIDNKESTTQYQPTSFIYKFLKSHFRYLIFGKPEDSVGLLLPSLSRLSCLQYLNLSFCNLFQIPNAIGLLHCLEILYLGGNNFVILPSNIKELSKLRRLNLQHCKQLKYLPELPSKNVLPIRRTTHLRTVVEFNIFDCPSIIDMECCYRMAFSWMIQFLQMHMQSDIPVEQITIVIPKTEIPMWLDKQNAGSSISIDPSPIMHDKNWIGVVCYLTFVAHNNPTTLSKEQPRIYFGFQSKQHGRGNYSIIPIRLEKDLVTVDLDHLLLIFFSREDFIGYYMSYLTEALHDISSIELRAIVRQPLGLHLEVKNCGYRWIYKEDLEQLNPQMMYNGN 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03484 1068 Gene3D - 187 349 IPR027417 -
Vivi5g03484 1068 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 186 - -
Vivi5g03484 1068 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 448 IPR027417 -
Vivi5g03484 1068 Gene3D - 16 186 IPR035897 -
Vivi5g03484 1068 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 162 IPR035897 -
Vivi5g03484 1068 Gene3D Ribonuclease Inhibitor 521 746 IPR032675 -
Vivi5g03484 1068 PRINTS Disease resistance protein signature 296 310 - -
Vivi5g03484 1068 PRINTS Disease resistance protein signature 220 235 - -
Vivi5g03484 1068 PRINTS Disease resistance protein signature 389 403 - -
Vivi5g03484 1068 PRINTS Disease resistance protein signature 678 694 - -
Vivi5g03484 1068 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 722 IPR044974 GO:0006952
Vivi5g03484 1068 Pfam TIR domain 19 165 IPR000157 GO:0007165
Vivi5g03484 1068 Gene3D - 355 438 IPR042197 -
Vivi5g03484 1068 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Vivi5g03484 1068 Gene3D Ribonuclease Inhibitor 756 884 IPR032675 -
Vivi5g03484 1068 Pfam Leucine Rich Repeat 613 631 IPR011713 -
Vivi5g03484 1068 SUPERFAMILY L domain-like 493 888 - -
Vivi5g03484 1068 Pfam NB-ARC domain 202 423 IPR002182 GO:0043531
Vivi5g03484 1068 SMART till_3 19 159 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03484 Vivi-Chr5 126803118 126808774 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03484 20 833 WRKY Transcription Factor Family AT4G12020 29.775 1.80e-84 299