Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03468 ATGGCTTGTAGTAGTCTCCAAACTGTATCTTCATCTAGGATGAGATGGAAATATGATGTGTTTGTTAGCTTTAGAGGTAAAGACACCCGCAACAACTTCACTGATCACCTCTTTGGTGCTCTTCATAAAAAAGGCCTTGTTGTCTTCAGAGATGATACAAAAATCAAGAAAGGGGAACATATATCAGTTGAGCTTCTACAAGCTATTGAAGGATCCCGTGTTTTGATTGTTATCTTCTCAACAAACTATGCTTCTTCCACATGGTGCTTGAAAGAACTCGCAAAAATTGATGATTGCATTCTTCAAGTATCAGGTCAAACTGTTCTACCTATTTTCTATGATGTTAGTCCATCTGATGTAGGGAAGCAAAGCGGAGATTACGATAAATCATTTCGAGAGCATGAAGAAAGATTCAAAGCAGATTTAAAGGAAGTGCAAAGATGGAGGAAAGCTCTCACACACATATCCAAAATCTCTGGTTGGGATCTAAAGGATAAGCCACAGTCTGGAGAGATTGGAGAAATTATTAAAAGGGTAGCACACTTATTGGGAAACAAATATTCTAATTTACCGGATATAGTTGGGATGCACTCAAGGGTGGAAGAATTAGAAAACCTTCTTATTCTGGACTCAGATGATAATGATGTTCGAGTTGTAGGGATTTGTGGAATGGGTGGAATAGGGAAGACAACTCTTGCTACCGCTTTGTATGCTAAATTCTCTAATCAATTTGATGCTTGCTGCTTTATTGATGATGTAAGTAAAATTTATGGAGATCATGGTCCAATTGGAGTACAAAAGCAACTTCTTTGTCAAACTTTAAATGAAGAAAATCTTCAAATATGCAATCTTCCTATGGCATCTAATTTGATTCGAAATAGGCTATGTCAAATAAAGTCCCTTGTTGTTCTTGATAATGTTGATGAAGGTGAACAACTAGATAAATTGGACATGAAAAGAGATTGGCTAGGCACAGGGAGTAGAATAATCATAATTTCTAGAAATGAGCATATCTTGAGAGAGCATGGAGTAGATGAAGTATACAAAGTTCGACTCTTGGATCGTAAATGTGCCCTTCAATTGTTTTGTAGGAAAGCTTTCAAAAGTGATGATATCATGAGCGGTTACATATACTTGACAAATGAAGTACTAGCATATGCCAATGGCCTTCCCCTAGCAATTAAAGTGTTGGGATCATTTTTGTATGGTCGAGATGTTTCTGAATGGAGCAGTGCGTTGGCAAGATTAAGAGAGAATCCAAGGAAAGATATTATGAATGTACTCCGAATTAGTTTTGATGGACTAGAAGATACAGAAAAGGAGATATTTCTTGATATTGCTTGTTTCTTTACAAGAAAAAGCGAGACATGCCTGAAGAAAATTTTAGATTTTCGTGGATTTCATCCTGAAATTGGTTTAAAAGTTCTCATTGATAAATCATTCATAACACGTGAGAAGCAGAGCATTTGTATGCATAATTTGTTCGCAGAACTAGGAAAGCGTGTTGTTAGAGAAATATCACCCAAAGAACCAAGAAAGTGGAACAGGATATGGGACTACAAGGATGTTCATAGTGTTATCTCAGAAAACATGGCAGCAGAAAACCTTGAAGCCATAGTTCTGCAGCGTTATACAGAAAATGGTGAAGAAATACAGGAGATGACAACATTGAGGGCTGAAGGTTTAGCAAAAATGAGTCAACTTAAATTGCTCATGCTGTGGAATTTGAATTTCTCAGGAAGTCTCAATTTTCTTTCAAGTGATTTGGGGTATTTGTATTGGGAAAAATATCCTTTCACTAGTTTACCATCAAGTTTTCATCCGGAAAAACTTGTTAAACTGATCCTACAACACAGCAACATCAAGAAACTATGGGAGGGCACAAAGTCTCTGCCTAATTTGACACATATTGATGTCTCTCACTCGAAAAATCTTATTATGATGCCAAATTTTAAGGAGATTCCAAATCTTGAGTGCCTAGATCTTGAAGGATGTATAAAACTTGTGAACATTGATCCGTCCATTGGTACTTTAAGAAGGCTTTCCACATTAAATTTGAAAAATTGTACAACTCTGGTCAGTATTCCTGACAACATTTTTGGTCTGAGATCTATCAAAGATCTAACTATCGCCGGCTGTCCAAATTTATTCAAATTTGATAATAAGCTGTTAGAAATACAAAGACAAACCGAACAATTGGAGATGCTTGATAACAAGGATAGTATCATCCAATACCAACCAACATCCTTTATCTACAAATTTCTAGAGACGCACTTCAGATTTTTGATTTTTCGAAAACCTGAAGATTCAGTTGGTTTATTGTTGCCTTCATTGTCTCGTTTGTCATGTTTGCAATATCTTGACCTGAGTTTCTGCAATCTTCTTCAAATCCCTACTGCAATTGGGTTGTTACATTGCTTAGAAACCCTCTATTTGGGGGGTAACAATTTTGTGACATTACCTACTAGCATCAAGGAACTTTCCAAACTTACAAGACTAAACTTGCAGCACTGTAAGCAGCTGAAATATTTGCCTGAGCTCCCATCAAAGAATGTCTTGCAAGTAAGAAGAACAACGGATGCTGAATTTAATATATTTGACTGCCCCAGTTTAATTGAGATGGAATGCTGTTATAGAATGGCTTTTTCTTGGATGATAGAATTCCTTCAGGTGCATATGCAATCCGACATCCCAATGGATCAGATTACAATTGTTATTCCCAGAGCTCAAATTCCAAAGTGGTTCAACAAACAAAATGTAGGTAATTCAATAAGCATTGATCCATCACGCATTATGCATGACAAGAATCAGATAGGTGTTGCTTGCTGCTTAACATTTGTAGCACATGATAATCCAACTAATTTAGGTGAAAAATGGCCACTTCGTTTTGGGTTGGGTTTTCATAGTAAACAGCATGGTCGTGGGATCTATTCAATTATTCCCATACGTCTTGAAAAAGATCTGGTCACAGTTGATTTAGATCACTTGTTGCTAATTTTTTTCAGTAGGGAGAGTTTTATTGGTATGATAAGTTATATAACAGAGGAATTGCATGATGATATTAGTGGTATTAAGTTGACAGCTTTGGTGAAGCAGCCCCTTGGTTTGCACTTGGAAGTCAAAAATTGTGGTTATCGTTGGATATTTAAGGAGGATCTGGAACAATTAAACCCAGAAATGATGTACAGTGGAAATTCTTCAATTCAGCCATATTATTGA 3219 0.365 MACSSLQTVSSSRMRWKYDVFVSFRGKDTRNNFTDHLFGALHKKGLVVFRDDTKIKKGEHISVELLQAIEGSRVLIVIFSTNYASSTWCLKELAKIDDCILQVSGQTVLPIFYDVSPSDVGKQSGDYDKSFREHEERFKADLKEVQRWRKALTHISKISGWDLKDKPQSGEIGEIIKRVAHLLGNKYSNLPDIVGMHSRVEELENLLILDSDDNDVRVVGICGMGGIGKTTLATALYAKFSNQFDACCFIDDVSKIYGDHGPIGVQKQLLCQTLNEENLQICNLPMASNLIRNRLCQIKSLVVLDNVDEGEQLDKLDMKRDWLGTGSRIIIISRNEHILREHGVDEVYKVRLLDRKCALQLFCRKAFKSDDIMSGYIYLTNEVLAYANGLPLAIKVLGSFLYGRDVSEWSSALARLRENPRKDIMNVLRISFDGLEDTEKEIFLDIACFFTRKSETCLKKILDFRGFHPEIGLKVLIDKSFITREKQSICMHNLFAELGKRVVREISPKEPRKWNRIWDYKDVHSVISENMAAENLEAIVLQRYTENGEEIQEMTTLRAEGLAKMSQLKLLMLWNLNFSGSLNFLSSDLGYLYWEKYPFTSLPSSFHPEKLVKLILQHSNIKKLWEGTKSLPNLTHIDVSHSKNLIMMPNFKEIPNLECLDLEGCIKLVNIDPSIGTLRRLSTLNLKNCTTLVSIPDNIFGLRSIKDLTIAGCPNLFKFDNKLLEIQRQTEQLEMLDNKDSIIQYQPTSFIYKFLETHFRFLIFRKPEDSVGLLLPSLSRLSCLQYLDLSFCNLLQIPTAIGLLHCLETLYLGGNNFVTLPTSIKELSKLTRLNLQHCKQLKYLPELPSKNVLQVRRTTDAEFNIFDCPSLIEMECCYRMAFSWMIEFLQVHMQSDIPMDQITIVIPRAQIPKWFNKQNVGNSISIDPSRIMHDKNQIGVACCLTFVAHDNPTNLGEKWPLRFGLGFHSKQHGRGIYSIIPIRLEKDLVTVDLDHLLLIFFSRESFIGMISYITEELHDDISGIKLTALVKQPLGLHLEVKNCGYRWIFKEDLEQLNPEMMYSGNSSIQPYY 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03468 1072 SUPERFAMILY L domain-like 558 872 - -
Vivi5g03468 1072 Pfam C-JID domain 907 1054 IPR045344 -
Vivi5g03468 1072 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 446 IPR027417 -
Vivi5g03468 1072 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 161 IPR035897 -
Vivi5g03468 1072 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 720 IPR044974 GO:0006952
Vivi5g03468 1072 PRINTS Disease resistance protein signature 218 233 - -
Vivi5g03468 1072 PRINTS Disease resistance protein signature 825 841 - -
Vivi5g03468 1072 PRINTS Disease resistance protein signature 294 308 - -
Vivi5g03468 1072 PRINTS Disease resistance protein signature 387 401 - -
Vivi5g03468 1072 Pfam TIR domain 17 172 IPR000157 GO:0007165
Vivi5g03468 1072 SUPERFAMILY "Winged helix" DNA-binding domain 423 527 IPR036390 -
Vivi5g03468 1072 Pfam Leucine Rich Repeat 610 629 IPR011713 -
Vivi5g03468 1072 SMART till_3 17 158 IPR000157 GO:0007165
Vivi5g03468 1072 Gene3D Ribonuclease Inhibitor 531 745 IPR032675 -
Vivi5g03468 1072 Gene3D Ribonuclease Inhibitor 763 883 IPR032675 -
Vivi5g03468 1072 Gene3D - 353 436 IPR042197 -
Vivi5g03468 1072 Coils Coil 719 739 - -
Vivi5g03468 1072 Pfam NB-ARC domain 200 422 IPR002182 GO:0043531
Vivi5g03468 1072 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 185 - -
Vivi5g03468 1072 Gene3D - 186 348 IPR027417 -
Vivi5g03468 1072 Gene3D - 12 185 IPR035897 -
Vivi5g03468 1072 ProSiteProfiles TIR domain profile. 16 183 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03468 Vivi-Chr5 126501308 126505037 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03468 18 870 WRKY Transcription Factor Family AT4G12020 29.621 5.38e-89 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03468 - - psat:127106907 1603.96