Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03467 ATGGCTTTGGCTTGCAATAACCTCCAAAGCGGCTCTTCAACTAGGATGAGATGGAAATATGATGTCTTTCTGAGCTTTAGAGGTGAAGACACCCGCAACAATTTCACCGATCACGTTTTTGGCGCTCTCAATAAGAAAAATATTATTACCTTCAGAGATGACACAAAGCTCAAAAAAGGGGAACATATTTCATCTGAGCTTCAACAAGCTATTGTAGGATCCCGTATTTTGATTGTAATCTTCTCAACAAACTATGCTTCTTCCACATGGTGCTTGGAAGAACTCGCAAAAATTGCTGACTGCATTAATGTTCCAGGACAATCTGTTCTACCTATTTTTTATGATGTCAGTCCTTCTGAGGTCCGGAAGCAAAGCGGATATTATGAAAAAGCCTTTCAAGAGCATGAACAAAGATTCAAAGCAAATTTAGAGGAAGTGCAAAGATGGAGAGGAGCTCTAACACAAGTAGCTAATCTCTCTGGCTGGGATGTAAGAGATAAGCCACAGTATGGAGAGATTGGAAAAATTATTAAAGAGGTAGCATGCTTATTGGGAAACAAATATTCTAATTTACCGGATATAGTTGGGATGAACTCAAGAGTGGAAGAATTAGAAAACCTTCTGATTTTGGACTCAGATGATAATGATGTTCGAGTTGTAGGGATTTGTGGAATGGGTGGAATAGGGAAGACAACTCTTGCTACCACATTGTATGCTAAATTCTCTAATCAATTTGATGCTCACTGCTTTATTGATGATGTAAGTAAAATTTATGGAGATCATGGTCCAATTGGAGTACAAAAGGAACTTCTTTGTCAAACTTCAAAAGAAGAAAATCTTCAAATATGCAATCTTCCTATGGCATCTAATTTGATTCGAAATAGGCTATGTCAAATAAAGTCCCTTGTTGTTCTTGATAATGTTGATGAAGGTGAACAACTGGATAAATTGGACATGAAAAGAGAATGGCTAGGCACAGGGAGTAGAATAATCATAATTTCTAGAAATGAGCATATCTTGAGAGAGTATGGAGTAGATAAAGTATACAAAGTTCGACTCTTGGATCGTAAATGTGCCCTTCAATTGTTCTGTAGGAAAGCTTTCAAAAGTGATGATATCAAGAGCGGTTACATATACTTGACAAATGAAGTACTAGCATATGCCAATGGCCTTCCCCTGGCAATTAAAGTGTTGGGATCATTTTTGTATGGTCGAGATGTTTCTGAATGGAGCAGTGCGTTGGCAAGATTAAGAGAGAATCCAAGGACAGATATCATGAATGTATTCCGAATTAGTTTTGATGGACTAGAGGATACAGAAAAGGAGATATTTCTTGATATTGCTTGTTTCTTTAATAGAGAGAGTGAGGTATACTTGAAGGAAATTTTAGATTTTCGTGGATTTCATCCTGAAATTGGTTTAAAAGTTCTAATTGATAAATCATTCATAACACGTGAGAAGCAGGGAATTTGTATGCATAATTTGTTAGTAGAACTAGGAAAGAGTGTTGTTAGAGAAATATCACCCAAAGAACCAAGAAAGTGGAACAGGATATGGGACTACAAGGATGTTCATAGTGTTATCTCAGAAAACATGGCAGCAGAAAACCTTGAAGCCATAGTTCTGCAGCGTTATACAGAAAATGATAAAGAAATACAGGAGATGACAACATTGAGGGCTGAAGGTTTAGCAAAAATGAGTCACCTTAAATTGCTCATGCTGTGGAATTTGAATTTCTCAGGAAGTCTCAATTTTCTTTCAAGTGATTTGGGATATTTATATTGGGAAAAATATCCTTTCACTAGTTTACCATCAAGTTTTCATCCGGATAAACTTGTTGAACTGGTCCTACAACACAGCAACGTCAAGAAACTATGGGAGGGCACAAAGACTCTACCTAATTTGACACGTATTGATCTCTCTGACTCAAAAAATCTTATTATGATGCCAAATTTTAAGGAGATTCCAAATCTTGAGAGCCTAAATCTTAAAGGATGTATAAAACTTGTGAAGATTGATCCGTCCATTGGCACCTTAAGAAGGCTTTCCTCATTGAATTTGAAAAATTGTACAACTCTGGTCAGTATTCCTGACAACATTTTTGGTCTGAGATCTATCAAATTTCTAAGTATCTCCGGCTGTCCAAATTTATTCAAATTTGATAATAAGCTGTTAGAAATACAAAGACAAACCAAACAATTGGAGATGCTTGATAGCAAGGATAGTATTATCCAATACCAACCAACATCCTTTATCTACAAATTTCTGGAGACCCACTTCAGATATTTGATTTTTCGAAAACCTGAAGATTCAGTTGGTTTATTATTGCCTTCATTGTCTCGTTTGTCATGTTTGGAATATCTTGACCTGAGTTTCTGCAATCTTCTTCAAATCCCTACTGCAATTGGGTTGTTACATTGCTTAGAAACCCTATATTTGGGGGGTAACAATTTTGTCACATTACCTTCTAGCATCAAGGAACTTTCCCAACTTAGAATACTAAACTTGCAGCACTGTAAGCAGCTGAAATATTTGCCTGAGCTCCCATCAAAGAATGTCTTGCAAGTAAGAAGAACAATGTATGCTGAATTTAATATTTTTGACTGCCCCAGTTTAATTGATATGGAATGCTGTTATAGAATGGCTTTTTCTTGGATGATACAATTCCTTCAGGTGCACATGCAATCCAAGATCCCAAAAGAACAGATTAGAATTGTTATTCCCAAAACTGAAATTCCAATGTGGCTCGACAAACAAAATGCAGGCAGTTCAATAAGCATCGATCCATCACCCATTATGCATGACAAGAATCGGATAGGCGTTGCTTGCTGCTTAACATTTGTAGCACATGATAATCCAACTAATTTAGGTGAAAAATGGCCACTTGGTTTTGGGTTGGGTTTTCAAAGTAAACAGCATGGTCGCGGGAACTATTCAATTATTCCCATACGTCTTGAAAAAGATCTGGTCACAGTTGATTTAGATCACTTGTTGCTAATTTTTTTCAGTAGGGAGAGTTTTATTGGTATGATAAGTTATATAACAGAGGAATTGCATGATGATATTAGTGGTATTGAGTTGACAGCTTTGATGGAGCAGCCCCTTGGTTTGCACTTGGAAGTCAAAAATTGTGGTTATCGTTGGATATTTAAGGAGGATCTGGAACAATTAAACCCAGAAATGATGTACAGCGGAAATTCGTCAGTTCAGCCATATTATTTTGCTGATAATAAAAAACCTTGA 3243 0.366 MALACNNLQSGSSTRMRWKYDVFLSFRGEDTRNNFTDHVFGALNKKNIITFRDDTKLKKGEHISSELQQAIVGSRILIVIFSTNYASSTWCLEELAKIADCINVPGQSVLPIFYDVSPSEVRKQSGYYEKAFQEHEQRFKANLEEVQRWRGALTQVANLSGWDVRDKPQYGEIGKIIKEVACLLGNKYSNLPDIVGMNSRVEELENLLILDSDDNDVRVVGICGMGGIGKTTLATTLYAKFSNQFDAHCFIDDVSKIYGDHGPIGVQKELLCQTSKEENLQICNLPMASNLIRNRLCQIKSLVVLDNVDEGEQLDKLDMKREWLGTGSRIIIISRNEHILREYGVDKVYKVRLLDRKCALQLFCRKAFKSDDIKSGYIYLTNEVLAYANGLPLAIKVLGSFLYGRDVSEWSSALARLRENPRTDIMNVFRISFDGLEDTEKEIFLDIACFFNRESEVYLKEILDFRGFHPEIGLKVLIDKSFITREKQGICMHNLLVELGKSVVREISPKEPRKWNRIWDYKDVHSVISENMAAENLEAIVLQRYTENDKEIQEMTTLRAEGLAKMSHLKLLMLWNLNFSGSLNFLSSDLGYLYWEKYPFTSLPSSFHPDKLVELVLQHSNVKKLWEGTKTLPNLTRIDLSDSKNLIMMPNFKEIPNLESLNLKGCIKLVKIDPSIGTLRRLSSLNLKNCTTLVSIPDNIFGLRSIKFLSISGCPNLFKFDNKLLEIQRQTKQLEMLDSKDSIIQYQPTSFIYKFLETHFRYLIFRKPEDSVGLLLPSLSRLSCLEYLDLSFCNLLQIPTAIGLLHCLETLYLGGNNFVTLPSSIKELSQLRILNLQHCKQLKYLPELPSKNVLQVRRTMYAEFNIFDCPSLIDMECCYRMAFSWMIQFLQVHMQSKIPKEQIRIVIPKTEIPMWLDKQNAGSSISIDPSPIMHDKNRIGVACCLTFVAHDNPTNLGEKWPLGFGLGFQSKQHGRGNYSIIPIRLEKDLVTVDLDHLLLIFFSRESFIGMISYITEELHDDISGIELTALMEQPLGLHLEVKNCGYRWIFKEDLEQLNPEMMYSGNSSVQPYYFADNKKP 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03467 1080 Gene3D - 188 349 IPR027417 -
Vivi5g03467 1080 Gene3D - 354 437 IPR042197 -
Vivi5g03467 1080 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 723 IPR044974 GO:0006952
Vivi5g03467 1080 SUPERFAMILY "Winged helix" DNA-binding domain 424 528 IPR036390 -
Vivi5g03467 1080 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Vivi5g03467 1080 Gene3D Ribonuclease Inhibitor 771 878 IPR032675 -
Vivi5g03467 1080 Gene3D Ribonuclease Inhibitor 534 745 IPR032675 -
Vivi5g03467 1080 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 162 IPR035897 -
Vivi5g03467 1080 SUPERFAMILY L domain-like 555 874 - -
Vivi5g03467 1080 SMART till_3 19 159 IPR000157 GO:0007165
Vivi5g03467 1080 PRINTS Disease resistance protein signature 219 234 - -
Vivi5g03467 1080 PRINTS Disease resistance protein signature 826 842 - -
Vivi5g03467 1080 PRINTS Disease resistance protein signature 388 402 - -
Vivi5g03467 1080 PRINTS Disease resistance protein signature 295 309 - -
Vivi5g03467 1080 Pfam TIR domain 19 166 IPR000157 GO:0007165
Vivi5g03467 1080 Pfam NB-ARC domain 200 422 IPR002182 GO:0043531
Vivi5g03467 1080 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 186 - -
Vivi5g03467 1080 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 447 IPR027417 -
Vivi5g03467 1080 Pfam Leucine Rich Repeat 611 630 IPR011713 -
Vivi5g03467 1080 Gene3D - 14 187 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03467 Vivi-Chr5 126477934 126482175 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03467 20 871 WRKY Transcription Factor Family AT4G12020 29.358 2.59e-85 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03467 - - psat:127106907 1612.43